EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000011061 (Gene tree)
Gene ID: 100914811
Gene Symbol: SRRM1
Alias: MGC39488|POP101|SRM160
Full Name: serine and arginine repetitive matrix 1
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 33768 bases
Position: chrGL849744.1:790751-824518
Accession: 16638
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000012928	PWI	PF01480.17	5.3e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000013034	SRRM1-201	3662	-	ENSSHAP00000012928	903 (aa)	-	G3WBX3

Gene Model

Click here to download ENSSHAG00000011061's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03013	RNA transport	KEGG
shr03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000011061's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000011061	SRRM1	53	95.833	ENSCAFG00020020948	SRRM1	57	96.117	Canis_lupus_dingo
ENSSHAG00000011061	SRRM1	51	96.296	ENSCCAG00000029474	SRRM1	89	96.296	Cebus_capucinus
ENSSHAG00000011061	SRRM1	53	78.571	ENSLACG00000014793	SRRM1	57	69.124	Latimeria_chalumnae
ENSSHAG00000011061	SRRM1	51	100.000	ENSMICG00000006553	SRRM1	57	96.602	Microcebus_murinus
ENSSHAG00000011061	SRRM1	100	93.798	ENSMODG00000013861	SRRM1	96	93.798	Monodelphis_domestica
ENSSHAG00000011061	SRRM1	51	99.571	ENSMEUG00000014704	SRRM1	55	86.538	Notamacropus_eugenii
ENSSHAG00000011061	SRRM1	55	96.078	ENSPTIG00000008778	-	58	96.635	Panthera_tigris_altaica
ENSSHAG00000011061	SRRM1	55	92.534	ENSPTRG00000000349	SRRM1	61	96.117	Pan_troglodytes
ENSSHAG00000011061	SRRM1	50	86.538	ENSPANG00000035568	-	52	86.154	Papio_anubis
ENSSHAG00000011061	SRRM1	100	93.909	ENSPCIG00000009214	SRRM1	100	93.909	Phascolarctos_cinereus
ENSSHAG00000011061	SRRM1	51	95.248	ENSSBOG00000019884	SRRM1	92	95.248	Saimiri_boliviensis_boliviensis
ENSSHAG00000011061	SRRM1	52	96.078	ENSSARG00000013718	SRRM1	56	84.135	Sorex_araneus
ENSSHAG00000011061	SRRM1	50	95.652	ENSVVUG00000026966	SRRM1	50	97.059	Vulpes_vulpes