EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000011087 (Gene tree)
Gene ID: 100933011
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 17287 bases
Position: chrGL834782.1:795064-812350
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000012959	zf-met	PF12874.7	6.5e-32	1	4
ENSSHAP00000012959	zf-met	PF12874.7	6.5e-32	2	4
ENSSHAP00000012959	zf-met	PF12874.7	6.5e-32	3	4
ENSSHAP00000012959	zf-met	PF12874.7	6.5e-32	4	4
ENSSHAP00000012960	zf-met	PF12874.7	6.5e-27	1	3
ENSSHAP00000012960	zf-met	PF12874.7	6.5e-27	2	3
ENSSHAP00000012960	zf-met	PF12874.7	6.5e-27	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000013066	-	2517	-	ENSSHAP00000012960	492 (aa)	-	G3WC05
ENSSHAT00000013065	-	828	-	ENSSHAP00000012959	276 (aa)	-	G3WC04

Gene Model

Click here to download ENSSHAG00000011087's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000011087's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000011087	-	62	42.697	ENSSHAG00000011847	ZMAT4	86	45.455
ENSSHAG00000011087	-	89	41.200	ENSSHAG00000011651	-	89	41.200

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000011087	-	100	66.667	ENSG00000166432	ZMAT1	92	50.190	Homo_sapiens
ENSSHAG00000011087	-	100	66.667	ENSAMEG00000004976	ZMAT1	98	66.667	Ailuropoda_melanoleuca
ENSSHAG00000011087	-	100	47.529	ENSANAG00000028725	ZMAT1	98	47.909	Aotus_nancymaae
ENSSHAG00000011087	-	100	53.179	ENSBTAG00000003601	ZMAT1	89	52.143	Bos_taurus
ENSSHAG00000011087	-	100	47.348	ENSCJAG00000019724	ZMAT1	98	47.148	Callithrix_jacchus
ENSSHAG00000011087	-	100	70.370	ENSCAFG00000017730	ZMAT1	96	34.407	Canis_familiaris
ENSSHAG00000011087	-	58	56.115	ENSCAFG00020007319	ZMAT1	99	56.115	Canis_lupus_dingo
ENSSHAG00000011087	-	88	54.264	ENSCHIG00000010507	ZMAT1	99	54.264	Capra_hircus
ENSSHAG00000011087	-	92	63.415	ENSTSYG00000007330	ZMAT1	96	47.471	Carlito_syrichta
ENSSHAG00000011087	-	90	57.252	ENSCPOG00000000581	ZMAT1	94	37.671	Cavia_porcellus
ENSSHAG00000011087	-	100	48.669	ENSCCAG00000023924	ZMAT1	98	49.049	Cebus_capucinus
ENSSHAG00000011087	-	100	67.593	ENSCATG00000000551	ZMAT1	83	67.593	Cercocebus_atys
ENSSHAG00000011087	-	100	46.957	ENSCLAG00000004197	ZMAT1	94	46.957	Chinchilla_lanigera
ENSSHAG00000011087	-	100	50.570	ENSCSAG00000009795	ZMAT1	73	50.570	Chlorocebus_sabaeus
ENSSHAG00000011087	-	100	54.545	ENSCPBG00000001356	ZMAT1	88	53.953	Chrysemys_picta_bellii
ENSSHAG00000011087	-	100	65.741	ENSCANG00000037194	ZMAT1	85	65.741	Colobus_angolensis_palliatus
ENSSHAG00000011087	-	100	40.996	ENSCGRG00001023697	Zmat1	94	41.445	Cricetulus_griseus_chok1gshd
ENSSHAG00000011087	-	100	40.996	ENSCGRG00000001964	Zmat1	96	41.538	Cricetulus_griseus_crigri
ENSSHAG00000011087	-	86	42.739	ENSDARG00000058679	zgc:114104	88	33.688	Danio_rerio
ENSSHAG00000011087	-	90	58.095	ENSDNOG00000014852	-	100	58.095	Dasypus_novemcinctus
ENSSHAG00000011087	-	59	47.500	ENSDNOG00000044924	-	82	47.500	Dasypus_novemcinctus
ENSSHAG00000011087	-	100	39.313	ENSDORG00000006821	Zmat1	93	39.147	Dipodomys_ordii
ENSSHAG00000011087	-	100	41.016	ENSETEG00000020259	ZMAT1	96	40.625	Echinops_telfairi
ENSSHAG00000011087	-	88	59.060	ENSEASG00005014185	ZMAT1	91	49.430	Equus_asinus_asinus
ENSSHAG00000011087	-	96	55.422	ENSECAG00000013390	ZMAT1	99	53.957	Equus_caballus
ENSSHAG00000011087	-	100	66.667	ENSFCAG00000023394	ZMAT1	98	68.519	Felis_catus
ENSSHAG00000011087	-	97	47.590	ENSFDAG00000004063	ZMAT1	89	39.313	Fukomys_damarensis
ENSSHAG00000011087	-	87	44.635	ENSGALG00000046009	-	99	32.101	Gallus_gallus
ENSSHAG00000011087	-	100	54.635	ENSGAGG00000002326	ZMAT1	91	54.043	Gopherus_agassizii
ENSSHAG00000011087	-	100	65.741	ENSGGOG00000025784	ZMAT1	87	65.741	Gorilla_gorilla
ENSSHAG00000011087	-	100	39.313	ENSHGLG00000002494	ZMAT1	94	39.231	Heterocephalus_glaber_female
ENSSHAG00000011087	-	100	39.313	ENSHGLG00100004968	ZMAT1	94	39.231	Heterocephalus_glaber_male
ENSSHAG00000011087	-	100	48.855	ENSSTOG00000011140	ZMAT1	100	49.430	Ictidomys_tridecemlineatus
ENSSHAG00000011087	-	100	46.667	ENSJJAG00000020188	Zmat1	93	41.600	Jaculus_jaculus
ENSSHAG00000011087	-	98	44.792	ENSLAFG00000015656	ZMAT1	100	45.560	Loxodonta_africana
ENSSHAG00000011087	-	89	67.593	ENSMFAG00000042343	ZMAT1	81	67.593	Macaca_fascicularis
ENSSHAG00000011087	-	100	67.593	ENSMMUG00000002151	ZMAT1	80	67.593	Macaca_mulatta
ENSSHAG00000011087	-	100	67.593	ENSMNEG00000036310	ZMAT1	80	67.593	Macaca_nemestrina
ENSSHAG00000011087	-	100	50.190	ENSMLEG00000005031	ZMAT1	93	50.190	Mandrillus_leucophaeus
ENSSHAG00000011087	-	91	44.275	ENSMGAG00000013165	-	92	45.977	Meleagris_gallopavo
ENSSHAG00000011087	-	100	40.304	ENSMAUG00000002941	Zmat1	95	40.304	Mesocricetus_auratus
ENSSHAG00000011087	-	90	57.143	ENSMICG00000003313	ZMAT1	98	49.049	Microcebus_murinus
ENSSHAG00000011087	-	100	42.478	ENSMOCG00000000169	Zmat1	80	42.478	Microtus_ochrogaster
ENSSHAG00000011087	-	91	72.510	ENSMODG00000009552	-	95	82.627	Monodelphis_domestica
ENSSHAG00000011087	-	100	42.803	ENSMUSG00000052676	Zmat1	93	41.445	Mus_musculus
ENSSHAG00000011087	-	100	41.445	MGP_PahariEiJ_G0031943	Zmat1	83	41.445	Mus_pahari
ENSSHAG00000011087	-	100	41.085	MGP_SPRETEiJ_G0034567	Zmat1	95	40.698	Mus_spretus
ENSSHAG00000011087	-	100	57.514	ENSMPUG00000002130	ZMAT1	97	57.514	Mustela_putorius_furo
ENSSHAG00000011087	-	91	54.248	ENSMLUG00000004417	ZMAT1	95	44.624	Myotis_lucifugus
ENSSHAG00000011087	-	100	41.546	ENSNGAG00000006608	Zmat1	81	41.154	Nannospalax_galili
ENSSHAG00000011087	-	100	66.667	ENSNLEG00000030520	ZMAT1	79	66.667	Nomascus_leucogenys
ENSSHAG00000011087	-	87	47.445	ENSOCUG00000004164	ZMAT1	100	46.931	Oryctolagus_cuniculus
ENSSHAG00000011087	-	91	58.824	ENSOGAG00000033601	ZMAT1	96	46.690	Otolemur_garnettii
ENSSHAG00000011087	-	100	64.815	ENSOARG00000001897	ZMAT1	98	64.815	Ovis_aries
ENSSHAG00000011087	-	100	66.667	ENSPPAG00000039554	ZMAT1	87	66.667	Pan_paniscus
ENSSHAG00000011087	-	100	68.519	ENSPPRG00000005258	ZMAT1	98	68.519	Panthera_pardus
ENSSHAG00000011087	-	100	69.444	ENSPTIG00000019057	ZMAT1	98	69.444	Panthera_tigris_altaica
ENSSHAG00000011087	-	100	66.667	ENSPTRG00000041840	ZMAT1	87	66.667	Pan_troglodytes
ENSSHAG00000011087	-	100	38.961	ENSPEMG00000009944	Zmat1	93	38.961	Peromyscus_maniculatus_bairdii
ENSSHAG00000011087	-	100	50.570	ENSPPYG00000020561	ZMAT1	91	50.570	Pongo_abelii
ENSSHAG00000011087	-	100	63.208	ENSPCAG00000010283	ZMAT1	98	63.208	Procavia_capensis
ENSSHAG00000011087	-	91	55.263	ENSPCOG00000021386	ZMAT1	96	47.232	Propithecus_coquereli
ENSSHAG00000011087	-	99	69.000	ENSPVAG00000013206	ZMAT1	99	69.000	Pteropus_vampyrus
ENSSHAG00000011087	-	100	40.230	ENSRNOG00000024135	Zmat1	95	40.304	Rattus_norvegicus
ENSSHAG00000011087	-	100	66.667	ENSRBIG00000034121	ZMAT1	85	66.667	Rhinopithecus_bieti
ENSSHAG00000011087	-	100	66.667	ENSRROG00000036747	ZMAT1	85	66.667	Rhinopithecus_roxellana
ENSSHAG00000011087	-	100	48.077	ENSSBOG00000029970	ZMAT1	98	48.462	Saimiri_boliviensis_boliviensis
ENSSHAG00000011087	-	87	50.407	ENSSARG00000003063	-	59	48.276	Sorex_araneus
ENSSHAG00000011087	-	94	57.455	ENSSPUG00000004951	ZMAT1	88	51.149	Sphenodon_punctatus
ENSSHAG00000011087	-	100	49.020	ENSSSCG00000012512	ZMAT1	99	53.237	Sus_scrofa
ENSSHAG00000011087	-	85	41.453	ENSTRUG00000014880	zgc:114104	88	31.599	Takifugu_rubripes
ENSSHAG00000011087	-	89	60.000	ENSTBEG00000012967	ZMAT1	100	60.000	Tupaia_belangeri
ENSSHAG00000011087	-	89	60.135	ENSTTRG00000016662	ZMAT1	96	68.519	Tursiops_truncatus
ENSSHAG00000011087	-	58	56.115	ENSUAMG00000015209	ZMAT1	99	56.115	Ursus_americanus
ENSSHAG00000011087	-	58	56.115	ENSUMAG00000000627	ZMAT1	99	56.115	Ursus_maritimus
ENSSHAG00000011087	-	100	47.387	ENSVPAG00000006267	ZMAT1	98	48.084	Vicugna_pacos
ENSSHAG00000011087	-	100	46.789	ENSVVUG00000005342	ZMAT1	84	42.197	Vulpes_vulpes
ENSSHAG00000011087	-	100	43.605	ENSXETG00000001949	krcc1	92	45.174	Xenopus_tropicalis