EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000011115 (Gene tree)
Gene ID: 100925744
Gene Symbol: LARP1
Alias: KIAA0731|LARP|MGC19556
Full Name: La ribonucleoprotein domain family member 1
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 18169 bases
Position: chrGL834608.1:800404-818572
Accession: 29531
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000012991	La	PF05383.17	6.5e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000013097	LARP1-201	2829	-	ENSSHAP00000012991	942 (aa)	-	G3WC36

Gene Model

Click here to download ENSSHAG00000011115's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000011115's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000011115	LARP1	71	58.576	ENSSHAG00000014474	LARP1B	99	58.866

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000011115	LARP1	99	84.277	ENSG00000155506	LARP1	89	96.914	Homo_sapiens
ENSSHAG00000011115	LARP1	85	84.834	ENSAPOG00000020685	larp1	85	84.834	Acanthochromis_polyacanthus
ENSSHAG00000011115	LARP1	100	84.359	ENSAMEG00000016673	LARP1	100	84.359	Ailuropoda_melanoleuca
ENSSHAG00000011115	LARP1	99	67.094	ENSACIG00000012994	larp1	82	76.438	Amphilophus_citrinellus
ENSSHAG00000011115	LARP1	88	71.645	ENSAOCG00000007792	larp1	99	71.645	Amphiprion_ocellaris
ENSSHAG00000011115	LARP1	99	70.010	ENSAPEG00000022246	larp1	89	70.010	Amphiprion_percula
ENSSHAG00000011115	LARP1	94	71.798	ENSATEG00000013523	larp1	84	72.747	Anabas_testudineus
ENSSHAG00000011115	LARP1	93	88.036	ENSAPLG00000007559	LARP1	99	88.488	Anas_platyrhynchos
ENSSHAG00000011115	LARP1	99	83.834	ENSACAG00000004071	LARP1	99	84.804	Anolis_carolinensis
ENSSHAG00000011115	LARP1	99	84.591	ENSANAG00000029949	LARP1	100	81.894	Aotus_nancymaae
ENSSHAG00000011115	LARP1	99	69.579	ENSACLG00000015256	larp1	98	68.416	Astatotilapia_calliptera
ENSSHAG00000011115	LARP1	97	72.410	ENSAMXG00000000859	larp1	86	72.410	Astyanax_mexicanus
ENSSHAG00000011115	LARP1	100	83.996	ENSBTAG00000008443	LARP1	87	84.623	Bos_taurus
ENSSHAG00000011115	LARP1	100	84.519	ENSCJAG00000004454	LARP1	93	84.591	Callithrix_jacchus
ENSSHAG00000011115	LARP1	99	84.519	ENSCAFG00000017639	LARP1	100	84.431	Canis_familiaris
ENSSHAG00000011115	LARP1	93	84.615	ENSCAFG00020023860	LARP1	100	84.615	Canis_lupus_dingo
ENSSHAG00000011115	LARP1	100	83.787	ENSCHIG00000014414	LARP1	88	83.072	Capra_hircus
ENSSHAG00000011115	LARP1	99	84.656	ENSTSYG00000013732	LARP1	99	82.267	Carlito_syrichta
ENSSHAG00000011115	LARP1	87	83.274	ENSCAPG00000013865	LARP1	87	83.255	Cavia_aperea
ENSSHAG00000011115	LARP1	99	84.205	ENSCPOG00000003377	LARP1	100	84.205	Cavia_porcellus
ENSSHAG00000011115	LARP1	100	84.414	ENSCCAG00000025201	LARP1	93	84.486	Cebus_capucinus
ENSSHAG00000011115	LARP1	99	84.277	ENSCATG00000030675	LARP1	93	84.277	Cercocebus_atys
ENSSHAG00000011115	LARP1	99	84.414	ENSCLAG00000012755	LARP1	99	82.427	Chinchilla_lanigera
ENSSHAG00000011115	LARP1	93	81.411	ENSCSAG00000010800	LARP1	100	81.411	Chlorocebus_sabaeus
ENSSHAG00000011115	LARP1	92	78.267	ENSCHOG00000012716	LARP1	96	71.789	Choloepus_hoffmanni
ENSSHAG00000011115	LARP1	100	85.774	ENSCPBG00000002173	LARP1	94	86.287	Chrysemys_picta_bellii
ENSSHAG00000011115	LARP1	99	84.172	ENSCANG00000037418	LARP1	93	84.172	Colobus_angolensis_palliatus
ENSSHAG00000011115	LARP1	100	84.551	ENSCGRG00001016913	Larp1	89	84.551	Cricetulus_griseus_chok1gshd
ENSSHAG00000011115	LARP1	96	81.719	ENSCGRG00000009916	Larp1	99	81.719	Cricetulus_griseus_crigri
ENSSHAG00000011115	LARP1	98	70.397	ENSCSEG00000016431	larp1	88	69.498	Cynoglossus_semilaevis
ENSSHAG00000011115	LARP1	99	68.711	ENSCVAG00000022687	larp1	87	70.582	Cyprinodon_variegatus
ENSSHAG00000011115	LARP1	99	66.952	ENSDARG00000101722	larp1	92	66.952	Danio_rerio
ENSSHAG00000011115	LARP1	100	84.254	ENSDNOG00000012073	LARP1	87	84.254	Dasypus_novemcinctus
ENSSHAG00000011115	LARP1	99	81.609	ENSDORG00000002897	Larp1	99	81.714	Dipodomys_ordii
ENSSHAG00000011115	LARP1	92	85.698	ENSETEG00000020251	LARP1	100	85.698	Echinops_telfairi
ENSSHAG00000011115	LARP1	100	84.463	ENSEASG00005001070	LARP1	87	84.463	Equus_asinus_asinus
ENSSHAG00000011115	LARP1	100	84.463	ENSECAG00000017002	LARP1	69	84.463	Equus_caballus
ENSSHAG00000011115	LARP1	98	79.872	ENSEEUG00000001065	LARP1	100	79.979	Erinaceus_europaeus
ENSSHAG00000011115	LARP1	99	69.247	ENSELUG00000019403	larp1	87	70.084	Esox_lucius
ENSSHAG00000011115	LARP1	100	84.567	ENSFCAG00000000592	LARP1	94	83.210	Felis_catus
ENSSHAG00000011115	LARP1	88	85.988	ENSFALG00000008335	LARP1	100	86.347	Ficedula_albicollis
ENSSHAG00000011115	LARP1	99	84.591	ENSFDAG00000021125	LARP1	100	84.591	Fukomys_damarensis
ENSSHAG00000011115	LARP1	58	63.669	ENSFHEG00000020307	larp1	92	66.469	Fundulus_heteroclitus
ENSSHAG00000011115	LARP1	100	86.047	ENSGALG00000040109	LARP1	95	83.738	Gallus_gallus
ENSSHAG00000011115	LARP1	100	85.310	ENSGAGG00000025113	LARP1	99	86.173	Gopherus_agassizii
ENSSHAG00000011115	LARP1	99	84.277	ENSGGOG00000006048	LARP1	93	84.277	Gorilla_gorilla
ENSSHAG00000011115	LARP1	99	70.393	ENSHBUG00000020762	larp1	97	71.019	Haplochromis_burtoni
ENSSHAG00000011115	LARP1	98	84.188	ENSHGLG00000006267	LARP1	86	83.987	Heterocephalus_glaber_female
ENSSHAG00000011115	LARP1	99	70.940	ENSHGLG00100003395	-	87	71.185	Heterocephalus_glaber_male
ENSSHAG00000011115	LARP1	99	84.414	ENSHGLG00100014230	-	100	84.414	Heterocephalus_glaber_male
ENSSHAG00000011115	LARP1	89	80.048	ENSHCOG00000010786	larp1	86	80.048	Hippocampus_comes
ENSSHAG00000011115	LARP1	97	66.775	ENSIPUG00000019105	Larp1	91	68.501	Ictalurus_punctatus
ENSSHAG00000011115	LARP1	99	82.199	ENSSTOG00000005678	LARP1	99	82.113	Ictidomys_tridecemlineatus
ENSSHAG00000011115	LARP1	100	78.706	ENSJJAG00000016950	Larp1	90	78.706	Jaculus_jaculus
ENSSHAG00000011115	LARP1	96	71.429	ENSKMAG00000018468	larp1	98	69.057	Kryptolebias_marmoratus
ENSSHAG00000011115	LARP1	97	71.041	ENSLBEG00000027172	larp1	85	71.041	Labrus_bergylta
ENSSHAG00000011115	LARP1	93	77.449	ENSLOCG00000012457	larp1	90	77.790	Lepisosteus_oculatus
ENSSHAG00000011115	LARP1	100	83.299	ENSLAFG00000008991	LARP1	89	83.299	Loxodonta_africana
ENSSHAG00000011115	LARP1	99	84.067	ENSMFAG00000031651	LARP1	93	84.067	Macaca_fascicularis
ENSSHAG00000011115	LARP1	99	81.303	ENSMMUG00000009411	LARP1	100	83.333	Macaca_mulatta
ENSSHAG00000011115	LARP1	96	83.099	ENSMNEG00000039294	LARP1	100	83.893	Macaca_nemestrina
ENSSHAG00000011115	LARP1	99	84.382	ENSMLEG00000035142	LARP1	93	84.382	Mandrillus_leucophaeus
ENSSHAG00000011115	LARP1	99	70.031	ENSMAMG00000021788	larp1	84	73.034	Mastacembelus_armatus
ENSSHAG00000011115	LARP1	99	69.579	ENSMZEG00005009345	larp1	98	68.416	Maylandia_zebra
ENSSHAG00000011115	LARP1	99	85.519	ENSMGAG00000005696	LARP1	100	85.624	Meleagris_gallopavo
ENSSHAG00000011115	LARP1	100	84.551	ENSMAUG00000001385	Larp1	89	84.551	Mesocricetus_auratus
ENSSHAG00000011115	LARP1	100	83.264	ENSMICG00000000837	LARP1	99	88.394	Microcebus_murinus
ENSSHAG00000011115	LARP1	100	84.864	ENSMOCG00000008920	Larp1	89	84.864	Microtus_ochrogaster
ENSSHAG00000011115	LARP1	94	55.293	ENSMMOG00000013364	larp1	78	63.824	Mola_mola
ENSSHAG00000011115	LARP1	100	97.155	ENSMODG00000008663	LARP1	99	97.155	Monodelphis_domestica
ENSSHAG00000011115	LARP1	99	69.427	ENSMALG00000017180	larp1	98	69.003	Monopterus_albus
ENSSHAG00000011115	LARP1	100	84.551	MGP_CAROLIEiJ_G0016383	Larp1	89	84.551	Mus_caroli
ENSSHAG00000011115	LARP1	100	84.551	ENSMUSG00000037331	Larp1	89	84.551	Mus_musculus
ENSSHAG00000011115	LARP1	100	84.551	MGP_PahariEiJ_G0017518	Larp1	89	84.551	Mus_pahari
ENSSHAG00000011115	LARP1	100	84.551	MGP_SPRETEiJ_G0017225	Larp1	89	84.551	Mus_spretus
ENSSHAG00000011115	LARP1	79	84.121	ENSMPUG00000013564	LARP1	84	84.121	Mustela_putorius_furo
ENSSHAG00000011115	LARP1	99	80.858	ENSMLUG00000002608	LARP1	100	80.858	Myotis_lucifugus
ENSSHAG00000011115	LARP1	99	81.571	ENSNGAG00000001098	Larp1	99	81.571	Nannospalax_galili
ENSSHAG00000011115	LARP1	96	71.101	ENSNBRG00000008963	larp1	91	71.101	Neolamprologus_brichardi
ENSSHAG00000011115	LARP1	99	83.053	ENSNLEG00000016588	LARP1	99	81.158	Nomascus_leucogenys
ENSSHAG00000011115	LARP1	99	88.605	ENSMEUG00000002957	LARP1	100	89.031	Notamacropus_eugenii
ENSSHAG00000011115	LARP1	99	84.293	ENSOPRG00000013014	LARP1	100	84.293	Ochotona_princeps
ENSSHAG00000011115	LARP1	100	84.150	ENSODEG00000010824	LARP1	100	84.205	Octodon_degus
ENSSHAG00000011115	LARP1	99	70.907	ENSONIG00000017308	larp1	87	70.907	Oreochromis_niloticus
ENSSHAG00000011115	LARP1	99	88.808	ENSOANG00000005096	LARP1	98	89.223	Ornithorhynchus_anatinus
ENSSHAG00000011115	LARP1	100	84.969	ENSOCUG00000013066	LARP1	89	84.969	Oryctolagus_cuniculus
ENSSHAG00000011115	LARP1	99	68.966	ENSORLG00000000824	larp1	98	71.739	Oryzias_latipes
ENSSHAG00000011115	LARP1	99	68.861	ENSORLG00020022241	larp1	87	68.757	Oryzias_latipes_hni
ENSSHAG00000011115	LARP1	99	66.876	ENSORLG00015007538	larp1	87	68.652	Oryzias_latipes_hsok
ENSSHAG00000011115	LARP1	99	66.701	ENSOMEG00000003134	larp1	88	68.619	Oryzias_melastigma
ENSSHAG00000011115	LARP1	99	84.712	ENSOGAG00000016750	LARP1	100	84.712	Otolemur_garnettii
ENSSHAG00000011115	LARP1	99	82.285	ENSOARG00000009893	LARP1	99	82.495	Ovis_aries
ENSSHAG00000011115	LARP1	99	84.277	ENSPPAG00000042993	LARP1	93	84.277	Pan_paniscus
ENSSHAG00000011115	LARP1	100	83.420	ENSPPRG00000009780	LARP1	94	83.420	Panthera_pardus
ENSSHAG00000011115	LARP1	100	83.212	ENSPTIG00000007013	LARP1	94	83.212	Panthera_tigris_altaica
ENSSHAG00000011115	LARP1	99	84.277	ENSPTRG00000017447	LARP1	93	84.277	Pan_troglodytes
ENSSHAG00000011115	LARP1	99	84.277	ENSPANG00000008080	LARP1	93	84.277	Papio_anubis
ENSSHAG00000011115	LARP1	99	72.000	ENSPKIG00000010096	larp1	88	72.421	Paramormyrops_kingsleyae
ENSSHAG00000011115	LARP1	96	67.760	ENSPKIG00000017153	-	85	68.950	Paramormyrops_kingsleyae
ENSSHAG00000011115	LARP1	95	68.847	ENSPMGG00000011599	larp1	90	68.958	Periophthalmus_magnuspinnatus
ENSSHAG00000011115	LARP1	99	82.094	ENSPEMG00000022523	Larp1	99	82.094	Peromyscus_maniculatus_bairdii
ENSSHAG00000011115	LARP1	99	95.610	ENSPCIG00000019242	LARP1	80	95.610	Phascolarctos_cinereus
ENSSHAG00000011115	LARP1	96	69.579	ENSPFOG00000005836	larp1	87	68.443	Poecilia_formosa
ENSSHAG00000011115	LARP1	96	70.311	ENSPLAG00000008936	larp1	87	69.239	Poecilia_latipinna
ENSSHAG00000011115	LARP1	96	69.767	ENSPMEG00000013656	larp1	87	68.410	Poecilia_mexicana
ENSSHAG00000011115	LARP1	96	69.368	ENSPREG00000005726	larp1	98	67.854	Poecilia_reticulata
ENSSHAG00000011115	LARP1	99	81.447	ENSPCAG00000006407	LARP1	100	81.447	Procavia_capensis
ENSSHAG00000011115	LARP1	99	76.963	ENSPCOG00000016949	LARP1	100	79.791	Propithecus_coquereli
ENSSHAG00000011115	LARP1	100	84.134	ENSPVAG00000002262	LARP1	87	84.134	Pteropus_vampyrus
ENSSHAG00000011115	LARP1	99	69.681	ENSPNYG00000007938	larp1	98	68.517	Pundamilia_nyererei
ENSSHAG00000011115	LARP1	99	70.299	ENSPNAG00000021427	larp1	88	72.222	Pygocentrus_nattereri
ENSSHAG00000011115	LARP1	99	82.094	ENSRNOG00000031544	Larp1	99	82.094	Rattus_norvegicus
ENSSHAG00000011115	LARP1	99	84.382	ENSRBIG00000038005	LARP1	93	84.382	Rhinopithecus_bieti
ENSSHAG00000011115	LARP1	99	84.382	ENSRROG00000034073	LARP1	100	84.340	Rhinopithecus_roxellana
ENSSHAG00000011115	LARP1	99	84.575	ENSSBOG00000019816	LARP1	100	81.885	Saimiri_boliviensis_boliviensis
ENSSHAG00000011115	LARP1	99	70.363	ENSSFOG00015020304	larp1	95	69.060	Scleropages_formosus
ENSSHAG00000011115	LARP1	98	71.537	ENSSFOG00015018058	-	87	70.488	Scleropages_formosus
ENSSHAG00000011115	LARP1	93	70.295	ENSSMAG00000007468	larp1	84	72.222	Scophthalmus_maximus
ENSSHAG00000011115	LARP1	99	69.583	ENSSDUG00000000268	larp1	97	71.445	Seriola_dumerili
ENSSHAG00000011115	LARP1	91	72.133	ENSSLDG00000016505	larp1	97	71.445	Seriola_lalandi_dorsalis
ENSSHAG00000011115	LARP1	64	88.693	ENSSARG00000013907	-	89	88.693	Sorex_araneus
ENSSHAG00000011115	LARP1	100	86.105	ENSSPUG00000012179	-	85	86.211	Sphenodon_punctatus
ENSSHAG00000011115	LARP1	99	70.298	ENSSPAG00000003910	larp1	87	70.298	Stegastes_partitus
ENSSHAG00000011115	LARP1	100	84.463	ENSSSCG00000017069	LARP1	100	84.521	Sus_scrofa
ENSSHAG00000011115	LARP1	96	86.105	ENSTGUG00000000704	LARP1	100	86.871	Taeniopygia_guttata
ENSSHAG00000011115	LARP1	99	70.064	ENSTRUG00000009470	larp1	86	70.064	Takifugu_rubripes
ENSSHAG00000011115	LARP1	93	83.802	ENSTBEG00000003381	LARP1	100	83.973	Tupaia_belangeri
ENSSHAG00000011115	LARP1	98	83.970	ENSTTRG00000015934	LARP1	100	83.979	Tursiops_truncatus
ENSSHAG00000011115	LARP1	100	84.463	ENSUAMG00000019334	LARP1	87	84.463	Ursus_americanus
ENSSHAG00000011115	LARP1	98	82.503	ENSUMAG00000002934	LARP1	98	82.503	Ursus_maritimus
ENSSHAG00000011115	LARP1	93	84.615	ENSVVUG00000004644	LARP1	100	84.615	Vulpes_vulpes
ENSSHAG00000011115	LARP1	99	78.964	ENSXETG00000008413	larp1	91	78.964	Xenopus_tropicalis
ENSSHAG00000011115	LARP1	77	74.008	ENSXCOG00000004022	larp1	79	73.907	Xiphophorus_couchianus
ENSSHAG00000011115	LARP1	96	69.231	ENSXMAG00000018780	larp1	87	68.172	Xiphophorus_maculatus