EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000011279 (Gene tree)
Gene ID: 100934850
Gene Symbol: -
Alias: CCDC101|FLJ32446|TDRD29
Full Name: SAGA complex associated factor 29
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 8071 bases
Position: chrGL841556.1:827158-835228
Accession: 100934850
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000013194	DUF1325	PF07039.11	6.4e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000013302	-	903	-	ENSSHAP00000013194	293 (aa)	XP_003762127	G3WCN9

Gene Model

Click here to download ENSSHAG00000011279's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000011279's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000011279	-	81	67.932	ENSSHAG00000002930	-	100	67.932

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000011279	-	100	97.270	ENSG00000176476	SGF29	100	97.270	Homo_sapiens
ENSSHAG00000011279	-	99	92.069	ENSAPOG00000007072	sgf29	100	92.069	Acanthochromis_polyacanthus
ENSSHAG00000011279	-	100	95.563	ENSAMEG00000015388	SGF29	100	95.563	Ailuropoda_melanoleuca
ENSSHAG00000011279	-	85	91.165	ENSACIG00000024432	sgf29	100	91.165	Amphilophus_citrinellus
ENSSHAG00000011279	-	99	92.069	ENSAOCG00000013494	sgf29	100	92.069	Amphiprion_ocellaris
ENSSHAG00000011279	-	86	91.667	ENSAPEG00000007284	sgf29	93	91.667	Amphiprion_percula
ENSSHAG00000011279	-	99	92.069	ENSATEG00000017566	sgf29	100	92.069	Anabas_testudineus
ENSSHAG00000011279	-	100	96.246	ENSACAG00000006595	SGF29	100	96.246	Anolis_carolinensis
ENSSHAG00000011279	-	100	76.792	ENSANAG00000032813	-	96	84.836	Aotus_nancymaae
ENSSHAG00000011279	-	100	97.270	ENSANAG00000037641	-	100	97.270	Aotus_nancymaae
ENSSHAG00000011279	-	99	82.877	ENSANAG00000023337	-	93	82.877	Aotus_nancymaae
ENSSHAG00000011279	-	99	90.690	ENSACLG00000016730	sgf29	100	90.690	Astatotilapia_calliptera
ENSSHAG00000011279	-	100	90.970	ENSAMXG00000003395	sgf29	100	90.970	Astyanax_mexicanus
ENSSHAG00000011279	-	100	98.294	ENSBTAG00000016883	SGF29	100	98.294	Bos_taurus
ENSSHAG00000011279	-	78	38.428	WBGene00021205	Y17G9B.8	89	38.428	Caenorhabditis_elegans
ENSSHAG00000011279	-	100	97.270	ENSCJAG00000006577	SGF29	100	97.270	Callithrix_jacchus
ENSSHAG00000011279	-	96	98.227	ENSCAFG00000017127	SGF29	92	98.227	Canis_familiaris
ENSSHAG00000011279	-	96	98.227	ENSCAFG00020017597	SGF29	92	98.227	Canis_lupus_dingo
ENSSHAG00000011279	-	100	98.294	ENSCHIG00000015325	SGF29	100	98.294	Capra_hircus
ENSSHAG00000011279	-	84	95.528	ENSTSYG00000003314	-	97	95.528	Carlito_syrichta
ENSSHAG00000011279	-	100	97.952	ENSTSYG00000025878	-	100	97.952	Carlito_syrichta
ENSSHAG00000011279	-	83	86.235	ENSCAPG00000000732	SGF29	96	86.235	Cavia_aperea
ENSSHAG00000011279	-	100	97.270	ENSCPOG00000027037	SGF29	100	97.270	Cavia_porcellus
ENSSHAG00000011279	-	99	72.945	ENSCCAG00000027313	-	66	72.945	Cebus_capucinus
ENSSHAG00000011279	-	100	97.270	ENSCCAG00000027359	-	100	97.270	Cebus_capucinus
ENSSHAG00000011279	-	100	97.270	ENSCATG00000034020	SGF29	100	97.270	Cercocebus_atys
ENSSHAG00000011279	-	100	97.952	ENSCLAG00000011510	SGF29	100	97.952	Chinchilla_lanigera
ENSSHAG00000011279	-	100	91.304	ENSCSAG00000006259	SGF29	100	91.304	Chlorocebus_sabaeus
ENSSHAG00000011279	-	87	64.706	ENSCHOG00000013831	-	100	64.706	Choloepus_hoffmanni
ENSSHAG00000011279	-	100	96.928	ENSCPBG00000012638	SGF29	85	96.928	Chrysemys_picta_bellii
ENSSHAG00000011279	-	99	61.938	ENSCING00000012953	-	99	61.938	Ciona_intestinalis
ENSSHAG00000011279	-	72	56.667	ENSCSAVG00000007328	-	87	56.667	Ciona_savignyi
ENSSHAG00000011279	-	85	97.189	ENSCANG00000039654	SGF29	100	97.189	Colobus_angolensis_palliatus
ENSSHAG00000011279	-	100	93.197	ENSCGRG00001014941	-	100	93.197	Cricetulus_griseus_chok1gshd
ENSSHAG00000011279	-	100	98.294	ENSCGRG00001016730	-	100	98.294	Cricetulus_griseus_chok1gshd
ENSSHAG00000011279	-	100	97.952	ENSCGRG00000003808	Sgf29	100	97.952	Cricetulus_griseus_crigri
ENSSHAG00000011279	-	82	90.871	ENSCSEG00000010575	sgf29	86	90.909	Cynoglossus_semilaevis
ENSSHAG00000011279	-	99	92.069	ENSCVAG00000014381	sgf29	100	92.069	Cyprinodon_variegatus
ENSSHAG00000011279	-	100	92.150	ENSDARG00000002339	sgf29	100	92.150	Danio_rerio
ENSSHAG00000011279	-	100	98.294	ENSDNOG00000048338	SGF29	99	98.294	Dasypus_novemcinctus
ENSSHAG00000011279	-	100	97.952	ENSDORG00000007002	Sgf29	100	97.952	Dipodomys_ordii
ENSSHAG00000011279	-	98	49.653	FBgn0050390	Sgf29	94	49.653	Drosophila_melanogaster
ENSSHAG00000011279	-	99	79.795	ENSEBUG00000008631	sgf29	98	79.795	Eptatretus_burgeri
ENSSHAG00000011279	-	92	98.141	ENSEASG00005014751	SGF29	91	98.141	Equus_asinus_asinus
ENSSHAG00000011279	-	100	98.294	ENSECAG00000011445	SGF29	95	98.294	Equus_caballus
ENSSHAG00000011279	-	91	98.134	ENSEEUG00000008521	SGF29	100	98.134	Erinaceus_europaeus
ENSSHAG00000011279	-	99	92.069	ENSELUG00000023888	sgf29	100	92.069	Esox_lucius
ENSSHAG00000011279	-	100	98.294	ENSFCAG00000012297	SGF29	100	98.294	Felis_catus
ENSSHAG00000011279	-	100	97.611	ENSFDAG00000012928	SGF29	100	97.611	Fukomys_damarensis
ENSSHAG00000011279	-	86	91.667	ENSFHEG00000022427	sgf29	93	91.667	Fundulus_heteroclitus
ENSSHAG00000011279	-	99	89.691	ENSGMOG00000000328	sgf29	100	89.691	Gadus_morhua
ENSSHAG00000011279	-	100	93.174	ENSGALG00000020590	SGF29	100	93.174	Gallus_gallus
ENSSHAG00000011279	-	99	92.069	ENSGAFG00000020626	sgf29	100	92.069	Gambusia_affinis
ENSSHAG00000011279	-	99	88.966	ENSGACG00000015001	sgf29	100	88.966	Gasterosteus_aculeatus
ENSSHAG00000011279	-	100	97.270	ENSGAGG00000012655	SGF29	100	97.270	Gopherus_agassizii
ENSSHAG00000011279	-	100	96.928	ENSGGOG00000000807	-	100	96.928	Gorilla_gorilla
ENSSHAG00000011279	-	76	79.111	ENSHBUG00000013677	sgf29	91	79.111	Haplochromis_burtoni
ENSSHAG00000011279	-	100	97.952	ENSHGLG00000014468	SGF29	100	97.952	Heterocephalus_glaber_female
ENSSHAG00000011279	-	100	97.952	ENSHGLG00100000132	SGF29	100	97.952	Heterocephalus_glaber_male
ENSSHAG00000011279	-	99	91.724	ENSHCOG00000002018	sgf29	100	91.724	Hippocampus_comes
ENSSHAG00000011279	-	100	91.809	ENSIPUG00000001851	sgf29	100	91.809	Ictalurus_punctatus
ENSSHAG00000011279	-	100	98.294	ENSSTOG00000013258	SGF29	100	98.294	Ictidomys_tridecemlineatus
ENSSHAG00000011279	-	100	98.294	ENSJJAG00000009013	Sgf29	100	98.294	Jaculus_jaculus
ENSSHAG00000011279	-	99	90.000	ENSKMAG00000004341	sgf29	99	90.000	Kryptolebias_marmoratus
ENSSHAG00000011279	-	85	91.200	ENSLBEG00000006754	sgf29	100	91.200	Labrus_bergylta
ENSSHAG00000011279	-	83	79.835	ENSLACG00000005336	SGF29	99	79.835	Latimeria_chalumnae
ENSSHAG00000011279	-	100	98.294	ENSLAFG00000028439	SGF29	100	98.294	Loxodonta_africana
ENSSHAG00000011279	-	100	97.270	ENSMFAG00000038040	SGF29	100	97.270	Macaca_fascicularis
ENSSHAG00000011279	-	100	97.270	ENSMMUG00000011370	SGF29	100	97.270	Macaca_mulatta
ENSSHAG00000011279	-	100	96.928	ENSMNEG00000043534	SGF29	100	96.928	Macaca_nemestrina
ENSSHAG00000011279	-	100	97.270	ENSMLEG00000031039	SGF29	100	97.270	Mandrillus_leucophaeus
ENSSHAG00000011279	-	99	91.724	ENSMAMG00000017907	sgf29	100	91.724	Mastacembelus_armatus
ENSSHAG00000011279	-	99	90.690	ENSMZEG00005001194	sgf29	100	90.690	Maylandia_zebra
ENSSHAG00000011279	-	99	90.690	ENSMZEG00005002947	sgf29	100	90.690	Maylandia_zebra
ENSSHAG00000011279	-	100	93.174	ENSMGAG00000012201	SGF29	100	93.174	Meleagris_gallopavo
ENSSHAG00000011279	-	100	98.294	ENSMAUG00000011063	Sgf29	100	98.294	Mesocricetus_auratus
ENSSHAG00000011279	-	100	97.952	ENSMICG00000009973	SGF29	100	97.952	Microcebus_murinus
ENSSHAG00000011279	-	100	98.294	ENSMOCG00000021358	Sgf29	100	98.294	Microtus_ochrogaster
ENSSHAG00000011279	-	85	89.328	ENSMMOG00000012706	sgf29	100	89.328	Mola_mola
ENSSHAG00000011279	-	100	98.294	ENSMODG00000015642	SGF29	100	98.294	Monodelphis_domestica
ENSSHAG00000011279	-	99	92.069	ENSMALG00000000231	sgf29	96	92.069	Monopterus_albus
ENSSHAG00000011279	-	100	97.611	MGP_CAROLIEiJ_G0030456	Sgf29	100	97.611	Mus_caroli
ENSSHAG00000011279	-	100	97.611	ENSMUSG00000030714	Sgf29	100	97.611	Mus_musculus
ENSSHAG00000011279	-	100	97.611	MGP_PahariEiJ_G0013666	Sgf29	100	97.611	Mus_pahari
ENSSHAG00000011279	-	100	97.611	MGP_SPRETEiJ_G0031570	Sgf29	100	97.611	Mus_spretus
ENSSHAG00000011279	-	100	98.294	ENSMPUG00000012669	SGF29	100	98.294	Mustela_putorius_furo
ENSSHAG00000011279	-	100	98.294	ENSMLUG00000022554	SGF29	100	98.294	Myotis_lucifugus
ENSSHAG00000011279	-	100	97.952	ENSNGAG00000022634	Sgf29	100	97.952	Nannospalax_galili
ENSSHAG00000011279	-	85	90.763	ENSNBRG00000020775	sgf29	100	90.763	Neolamprologus_brichardi
ENSSHAG00000011279	-	99	86.986	ENSNLEG00000001604	SGF29	99	86.986	Nomascus_leucogenys
ENSSHAG00000011279	-	76	100.000	ENSMEUG00000006221	SGF29	76	100.000	Notamacropus_eugenii
ENSSHAG00000011279	-	100	97.952	ENSOPRG00000009316	SGF29	100	97.952	Ochotona_princeps
ENSSHAG00000011279	-	100	97.270	ENSODEG00000013702	SGF29	100	97.270	Octodon_degus
ENSSHAG00000011279	-	99	90.722	ENSONIG00000009377	sgf29	100	90.722	Oreochromis_niloticus
ENSSHAG00000011279	-	68	98.485	ENSOANG00000009696	SGF29	100	98.485	Ornithorhynchus_anatinus
ENSSHAG00000011279	-	92	97.778	ENSOCUG00000025361	-	100	97.778	Oryctolagus_cuniculus
ENSSHAG00000011279	-	83	75.410	ENSOCUG00000021684	-	100	75.410	Oryctolagus_cuniculus
ENSSHAG00000011279	-	99	91.034	ENSORLG00000027873	sgf29	100	91.034	Oryzias_latipes
ENSSHAG00000011279	-	99	91.034	ENSORLG00020020976	-	100	91.034	Oryzias_latipes_hni
ENSSHAG00000011279	-	99	91.034	ENSORLG00015011795	sgf29	100	91.034	Oryzias_latipes_hsok
ENSSHAG00000011279	-	99	91.379	ENSOMEG00000020118	sgf29	100	91.379	Oryzias_melastigma
ENSSHAG00000011279	-	100	91.126	ENSOGAG00000015794	-	100	91.126	Otolemur_garnettii
ENSSHAG00000011279	-	100	64.286	ENSOGAG00000034571	-	100	64.286	Otolemur_garnettii
ENSSHAG00000011279	-	100	98.294	ENSOARG00000003226	SGF29	100	98.294	Ovis_aries
ENSSHAG00000011279	-	96	97.153	ENSPPAG00000039380	SGF29	99	95.473	Pan_paniscus
ENSSHAG00000011279	-	100	98.294	ENSPPRG00000006831	SGF29	100	98.294	Panthera_pardus
ENSSHAG00000011279	-	100	98.294	ENSPTIG00000014381	SGF29	100	98.294	Panthera_tigris_altaica
ENSSHAG00000011279	-	100	72.355	ENSPTRG00000007925	SGF29	100	72.241	Pan_troglodytes
ENSSHAG00000011279	-	100	97.270	ENSPANG00000019684	SGF29	100	97.270	Papio_anubis
ENSSHAG00000011279	-	100	88.396	ENSPKIG00000018503	sgf29	100	88.396	Paramormyrops_kingsleyae
ENSSHAG00000011279	-	99	84.828	ENSPMGG00000006683	sgf29	99	84.828	Periophthalmus_magnuspinnatus
ENSSHAG00000011279	-	100	100.000	ENSPCIG00000025200	SGF29	100	100.000	Phascolarctos_cinereus
ENSSHAG00000011279	-	99	92.414	ENSPFOG00000010035	sgf29	99	92.414	Poecilia_formosa
ENSSHAG00000011279	-	99	92.414	ENSPLAG00000000559	sgf29	100	92.414	Poecilia_latipinna
ENSSHAG00000011279	-	99	92.414	ENSPMEG00000007026	sgf29	100	92.414	Poecilia_mexicana
ENSSHAG00000011279	-	99	92.069	ENSPREG00000011868	sgf29	100	92.069	Poecilia_reticulata
ENSSHAG00000011279	-	100	97.270	ENSPPYG00000007233	SGF29	100	97.270	Pongo_abelii
ENSSHAG00000011279	-	100	97.952	ENSPCOG00000028233	SGF29	100	97.952	Propithecus_coquereli
ENSSHAG00000011279	-	86	90.476	ENSPNYG00000012353	sgf29	100	90.763	Pundamilia_nyererei
ENSSHAG00000011279	-	85	92.369	ENSPNAG00000014651	sgf29	100	92.369	Pygocentrus_nattereri
ENSSHAG00000011279	-	100	97.952	ENSRNOG00000019245	Sgf29	100	97.952	Rattus_norvegicus
ENSSHAG00000011279	-	100	97.270	ENSRBIG00000041003	SGF29	100	97.270	Rhinopithecus_bieti
ENSSHAG00000011279	-	100	97.270	ENSRROG00000044894	SGF29	100	97.270	Rhinopithecus_roxellana
ENSSHAG00000011279	-	91	96.992	ENSSBOG00000008004	SGF29	100	97.189	Saimiri_boliviensis_boliviensis
ENSSHAG00000011279	-	100	88.396	ENSSFOG00015001254	sgf29	100	88.396	Scleropages_formosus
ENSSHAG00000011279	-	99	92.414	ENSSMAG00000016613	sgf29	100	92.414	Scophthalmus_maximus
ENSSHAG00000011279	-	99	92.069	ENSSDUG00000005977	sgf29	100	92.069	Seriola_dumerili
ENSSHAG00000011279	-	99	92.069	ENSSLDG00000012446	sgf29	100	92.069	Seriola_lalandi_dorsalis
ENSSHAG00000011279	-	100	96.587	ENSSPUG00000010121	SGF29	100	96.587	Sphenodon_punctatus
ENSSHAG00000011279	-	99	92.069	ENSSPAG00000018994	sgf29	100	92.069	Stegastes_partitus
ENSSHAG00000011279	-	100	98.294	ENSSSCG00000022778	SGF29	100	98.294	Sus_scrofa
ENSSHAG00000011279	-	96	90.780	ENSTNIG00000006496	SGF29	100	90.780	Tetraodon_nigroviridis
ENSSHAG00000011279	-	99	91.034	ENSTNIG00000001984	sgf29	99	91.034	Tetraodon_nigroviridis
ENSSHAG00000011279	-	97	96.842	ENSUAMG00000010172	SGF29	85	98.141	Ursus_americanus
ENSSHAG00000011279	-	88	97.287	ENSUMAG00000010966	SGF29	79	97.287	Ursus_maritimus
ENSSHAG00000011279	-	100	96.246	ENSXETG00000033185	sgf29	100	96.246	Xenopus_tropicalis
ENSSHAG00000011279	-	99	92.096	ENSXCOG00000011501	sgf29	100	92.096	Xiphophorus_couchianus
ENSSHAG00000011279	-	99	92.414	ENSXMAG00000010932	sgf29	100	92.414	Xiphophorus_maculatus