EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000011394 (Gene tree)
Gene ID: 100932454
Gene Symbol: TSR1
Alias: FLJ10534
Full Name: TSR1%2C ribosome maturation factor
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 9272 bases
Position: chrGL857007.1:843953-853224
Accession: 100932454
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000013327	AARP2CN	PF08142.12	9.7e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000013437	TSR1-201	2642	XM_012549864	ENSSHAP00000013327	803 (aa)	XP_012405318	G3WD22

Gene Model

Click here to download ENSSHAG00000011394's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000011394's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000011394	TSR1	99	77.917	ENSG00000167721	TSR1	99	78.043	Homo_sapiens
ENSSHAG00000011394	TSR1	99	56.086	ENSAPOG00000020891	tsr1	99	56.563	Acanthochromis_polyacanthus
ENSSHAG00000011394	TSR1	100	76.132	ENSAMEG00000007599	TSR1	99	75.765	Ailuropoda_melanoleuca
ENSSHAG00000011394	TSR1	99	57.740	ENSACIG00000007090	tsr1	99	57.843	Amphilophus_citrinellus
ENSSHAG00000011394	TSR1	99	56.469	ENSAOCG00000023284	tsr1	98	56.485	Amphiprion_ocellaris
ENSSHAG00000011394	TSR1	94	56.401	ENSAPEG00000008452	tsr1	100	56.417	Amphiprion_percula
ENSSHAG00000011394	TSR1	99	55.317	ENSATEG00000021961	tsr1	99	55.795	Anabas_testudineus
ENSSHAG00000011394	TSR1	92	70.604	ENSAPLG00000013422	TSR1	100	70.147	Anas_platyrhynchos
ENSSHAG00000011394	TSR1	71	58.803	ENSACAG00000000859	TSR1	92	58.632	Anolis_carolinensis
ENSSHAG00000011394	TSR1	99	77.541	ENSANAG00000031071	TSR1	99	77.164	Aotus_nancymaae
ENSSHAG00000011394	TSR1	99	56.438	ENSACLG00000007595	tsr1	98	56.679	Astatotilapia_calliptera
ENSSHAG00000011394	TSR1	51	52.267	ENSAMXG00000008470	tsr1	87	52.267	Astyanax_mexicanus
ENSSHAG00000011394	TSR1	100	78.067	ENSBTAG00000004225	TSR1	100	78.094	Bos_taurus
ENSSHAG00000011394	TSR1	97	39.825	WBGene00006497	tag-151	96	39.451	Caenorhabditis_elegans
ENSSHAG00000011394	TSR1	98	77.244	ENSCJAG00000012456	TSR1	98	76.865	Callithrix_jacchus
ENSSHAG00000011394	TSR1	90	74.176	ENSCAFG00000019273	-	100	76.818	Canis_familiaris
ENSSHAG00000011394	TSR1	100	75.465	ENSCAFG00000002106	-	100	75.743	Canis_familiaris
ENSSHAG00000011394	TSR1	100	74.969	ENSCAFG00020009728	TSR1	100	75.248	Canis_lupus_dingo
ENSSHAG00000011394	TSR1	100	77.695	ENSCHIG00000023935	TSR1	100	77.723	Capra_hircus
ENSSHAG00000011394	TSR1	100	76.923	ENSTSYG00000005468	TSR1	100	76.398	Carlito_syrichta
ENSSHAG00000011394	TSR1	93	76.235	ENSCPOG00000014833	TSR1	99	76.533	Cavia_porcellus
ENSSHAG00000011394	TSR1	93	77.139	ENSCCAG00000028962	TSR1	98	76.738	Cebus_capucinus
ENSSHAG00000011394	TSR1	99	77.820	ENSCATG00000044262	TSR1	99	78.070	Cercocebus_atys
ENSSHAG00000011394	TSR1	100	77.543	ENSCLAG00000005567	TSR1	100	77.047	Chinchilla_lanigera
ENSSHAG00000011394	TSR1	99	77.945	ENSCSAG00000013788	TSR1	99	78.195	Chlorocebus_sabaeus
ENSSHAG00000011394	TSR1	99	71.517	ENSCPBG00000020363	TSR1	97	71.023	Chrysemys_picta_bellii
ENSSHAG00000011394	TSR1	97	47.302	ENSCING00000020658	-	99	46.816	Ciona_intestinalis
ENSSHAG00000011394	TSR1	97	46.474	ENSCSAVG00000001875	-	100	45.365	Ciona_savignyi
ENSSHAG00000011394	TSR1	99	69.598	ENSCANG00000033056	TSR1	99	72.075	Colobus_angolensis_palliatus
ENSSHAG00000011394	TSR1	100	75.528	ENSCGRG00001023942	Tsr1	100	75.776	Cricetulus_griseus_chok1gshd
ENSSHAG00000011394	TSR1	100	70.522	ENSCGRG00000013015	Tsr1	100	72.139	Cricetulus_griseus_crigri
ENSSHAG00000011394	TSR1	99	56.401	ENSCSEG00000013009	tsr1	99	55.918	Cynoglossus_semilaevis
ENSSHAG00000011394	TSR1	99	57.126	ENSCVAG00000000506	tsr1	99	57.333	Cyprinodon_variegatus
ENSSHAG00000011394	TSR1	99	55.366	ENSDARG00000007744	tsr1	99	55.732	Danio_rerio
ENSSHAG00000011394	TSR1	100	76.923	ENSDNOG00000004715	TSR1	100	78.038	Dasypus_novemcinctus
ENSSHAG00000011394	TSR1	97	66.837	ENSDORG00000023234	-	100	66.581	Dipodomys_ordii
ENSSHAG00000011394	TSR1	100	76.704	ENSDORG00000016371	-	100	76.456	Dipodomys_ordii
ENSSHAG00000011394	TSR1	97	44.404	FBgn0037073	Tsr1	96	44.183	Drosophila_melanogaster
ENSSHAG00000011394	TSR1	100	71.801	ENSETEG00000017534	TSR1	89	84.590	Echinops_telfairi
ENSSHAG00000011394	TSR1	95	54.237	ENSEBUG00000013731	TSR1	97	52.934	Eptatretus_burgeri
ENSSHAG00000011394	TSR1	100	77.571	ENSEASG00005009302	TSR1	97	77.323	Equus_asinus_asinus
ENSSHAG00000011394	TSR1	100	77.819	ENSECAG00000009114	TSR1	100	77.571	Equus_caballus
ENSSHAG00000011394	TSR1	99	56.348	ENSELUG00000020984	tsr1	94	56.832	Esox_lucius
ENSSHAG00000011394	TSR1	100	77.323	ENSFCAG00000006313	TSR1	100	77.323	Felis_catus
ENSSHAG00000011394	TSR1	99	70.567	ENSFALG00000006532	TSR1	99	70.567	Ficedula_albicollis
ENSSHAG00000011394	TSR1	100	76.770	ENSFDAG00000006038	TSR1	100	76.244	Fukomys_damarensis
ENSSHAG00000011394	TSR1	99	55.861	ENSFHEG00000003626	tsr1	98	55.981	Fundulus_heteroclitus
ENSSHAG00000011394	TSR1	99	55.215	ENSGMOG00000010336	tsr1	99	55.202	Gadus_morhua
ENSSHAG00000011394	TSR1	99	55.847	ENSGAFG00000012993	tsr1	100	54.885	Gambusia_affinis
ENSSHAG00000011394	TSR1	99	56.687	ENSGACG00000010843	tsr1	99	56.196	Gasterosteus_aculeatus
ENSSHAG00000011394	TSR1	99	70.927	ENSGAGG00000025619	-	99	70.567	Gopherus_agassizii
ENSSHAG00000011394	TSR1	99	77.541	ENSGGOG00000001704	TSR1	99	78.168	Gorilla_gorilla
ENSSHAG00000011394	TSR1	99	56.318	ENSHBUG00000017904	tsr1	100	56.633	Haplochromis_burtoni
ENSSHAG00000011394	TSR1	100	76.828	ENSHGLG00000012806	-	100	76.733	Heterocephalus_glaber_female
ENSSHAG00000011394	TSR1	98	66.751	ENSHGLG00000015688	-	99	66.498	Heterocephalus_glaber_female
ENSSHAG00000011394	TSR1	100	76.828	ENSHGLG00100015392	TSR1	100	76.733	Heterocephalus_glaber_male
ENSSHAG00000011394	TSR1	99	58.693	ENSHCOG00000001432	tsr1	99	58.272	Hippocampus_comes
ENSSHAG00000011394	TSR1	99	56.077	ENSIPUG00000004618	tsr1	99	56.851	Ictalurus_punctatus
ENSSHAG00000011394	TSR1	100	76.143	ENSSTOG00000011819	TSR1	100	76.267	Ictidomys_tridecemlineatus
ENSSHAG00000011394	TSR1	92	71.235	ENSJJAG00000019505	Tsr1	95	70.963	Jaculus_jaculus
ENSSHAG00000011394	TSR1	99	56.543	ENSKMAG00000005763	tsr1	98	56.475	Kryptolebias_marmoratus
ENSSHAG00000011394	TSR1	99	54.850	ENSLBEG00000021823	tsr1	98	55.769	Labrus_bergylta
ENSSHAG00000011394	TSR1	99	64.670	ENSLACG00000002197	TSR1	99	64.068	Latimeria_chalumnae
ENSSHAG00000011394	TSR1	99	51.961	ENSLOCG00000006491	TSR1	98	52.083	Lepisosteus_oculatus
ENSSHAG00000011394	TSR1	99	77.945	ENSMFAG00000021330	TSR1	99	78.195	Macaca_fascicularis
ENSSHAG00000011394	TSR1	99	77.694	ENSMMUG00000017519	TSR1	99	77.945	Macaca_mulatta
ENSSHAG00000011394	TSR1	99	77.569	ENSMNEG00000031382	TSR1	99	77.820	Macaca_nemestrina
ENSSHAG00000011394	TSR1	99	77.694	ENSMLEG00000036733	TSR1	99	77.945	Mandrillus_leucophaeus
ENSSHAG00000011394	TSR1	99	55.991	ENSMAMG00000017918	tsr1	98	56.615	Mastacembelus_armatus
ENSSHAG00000011394	TSR1	99	56.611	ENSMZEG00005007477	tsr1	99	56.731	Maylandia_zebra
ENSSHAG00000011394	TSR1	99	69.250	ENSMGAG00000005576	TSR1	99	69.496	Meleagris_gallopavo
ENSSHAG00000011394	TSR1	100	77.323	ENSMICG00000012943	TSR1	100	77.323	Microcebus_murinus
ENSSHAG00000011394	TSR1	100	74.907	ENSMOCG00000022764	Tsr1	100	74.566	Microtus_ochrogaster
ENSSHAG00000011394	TSR1	99	56.590	ENSMMOG00000014280	tsr1	99	56.711	Mola_mola
ENSSHAG00000011394	TSR1	100	86.211	ENSMODG00000010658	TSR1	100	86.070	Monodelphis_domestica
ENSSHAG00000011394	TSR1	99	56.643	ENSMALG00000011681	tsr1	98	57.455	Monopterus_albus
ENSSHAG00000011394	TSR1	100	75.062	MGP_CAROLIEiJ_G0016727	Tsr1	100	75.062	Mus_caroli
ENSSHAG00000011394	TSR1	100	75.558	ENSMUSG00000038335	Tsr1	100	75.558	Mus_musculus
ENSSHAG00000011394	TSR1	100	75.434	MGP_PahariEiJ_G0017864	Tsr1	100	75.434	Mus_pahari
ENSSHAG00000011394	TSR1	100	75.806	MGP_SPRETEiJ_G0017570	Tsr1	100	75.806	Mus_spretus
ENSSHAG00000011394	TSR1	82	77.390	ENSMPUG00000013000	TSR1	100	77.576	Mustela_putorius_furo
ENSSHAG00000011394	TSR1	100	78.288	ENSMLUG00000003505	TSR1	100	78.164	Myotis_lucifugus
ENSSHAG00000011394	TSR1	99	57.332	ENSNBRG00000020728	tsr1	98	57.572	Neolamprologus_brichardi
ENSSHAG00000011394	TSR1	99	71.608	ENSNLEG00000017184	TSR1	99	73.208	Nomascus_leucogenys
ENSSHAG00000011394	TSR1	100	81.219	ENSMEUG00000015828	TSR1	100	82.711	Notamacropus_eugenii
ENSSHAG00000011394	TSR1	99	56.832	ENSONIG00000013131	tsr1	99	56.235	Oreochromis_niloticus
ENSSHAG00000011394	TSR1	96	74.422	ENSOANG00000008637	TSR1	100	74.293	Ornithorhynchus_anatinus
ENSSHAG00000011394	TSR1	100	77.200	ENSOCUG00000014256	TSR1	100	77.228	Oryctolagus_cuniculus
ENSSHAG00000011394	TSR1	99	55.516	ENSORLG00000004926	tsr1	98	55.529	Oryzias_latipes
ENSSHAG00000011394	TSR1	99	55.582	ENSORLG00020008792	tsr1	98	55.342	Oryzias_latipes_hni
ENSSHAG00000011394	TSR1	99	55.516	ENSORLG00015013838	tsr1	98	55.596	Oryzias_latipes_hsok
ENSSHAG00000011394	TSR1	99	56.355	ENSOMEG00000004830	tsr1	98	56.197	Oryzias_melastigma
ENSSHAG00000011394	TSR1	100	77.245	ENSOGAG00000004492	TSR1	100	77.245	Otolemur_garnettii
ENSSHAG00000011394	TSR1	100	77.571	ENSOARG00000015437	TSR1	97	77.599	Ovis_aries
ENSSHAG00000011394	TSR1	99	78.043	ENSPPAG00000036355	TSR1	99	78.168	Pan_paniscus
ENSSHAG00000011394	TSR1	100	76.952	ENSPPRG00000015519	-	100	76.952	Panthera_pardus
ENSSHAG00000011394	TSR1	100	77.076	ENSPTIG00000010608	TSR1	100	77.076	Panthera_tigris_altaica
ENSSHAG00000011394	TSR1	99	78.043	ENSPTRG00000008547	TSR1	99	78.168	Pan_troglodytes
ENSSHAG00000011394	TSR1	99	74.687	ENSPANG00000024463	TSR1	99	74.687	Papio_anubis
ENSSHAG00000011394	TSR1	99	55.583	ENSPKIG00000013972	tsr1	99	55.266	Paramormyrops_kingsleyae
ENSSHAG00000011394	TSR1	88	69.565	ENSPSIG00000018258	TSR1	100	69.101	Pelodiscus_sinensis
ENSSHAG00000011394	TSR1	99	58.831	ENSPMGG00000011577	tsr1	98	58.582	Periophthalmus_magnuspinnatus
ENSSHAG00000011394	TSR1	100	75.558	ENSPEMG00000018033	Tsr1	100	75.186	Peromyscus_maniculatus_bairdii
ENSSHAG00000011394	TSR1	100	89.441	ENSPCIG00000009357	TSR1	98	89.193	Phascolarctos_cinereus
ENSSHAG00000011394	TSR1	99	55.932	ENSPFOG00000004483	TSR1	99	56.695	Poecilia_formosa
ENSSHAG00000011394	TSR1	99	56.319	ENSPLAG00000022320	tsr1	99	56.196	Poecilia_latipinna
ENSSHAG00000011394	TSR1	99	55.648	ENSPMEG00000004577	tsr1	98	55.781	Poecilia_mexicana
ENSSHAG00000011394	TSR1	99	54.819	ENSPREG00000010354	tsr1	94	55.760	Poecilia_reticulata
ENSSHAG00000011394	TSR1	99	71.197	ENSPPYG00000007792	TSR1	99	71.446	Pongo_abelii
ENSSHAG00000011394	TSR1	53	81.818	ENSPCAG00000012973	-	70	82.857	Procavia_capensis
ENSSHAG00000011394	TSR1	100	76.952	ENSPCOG00000017928	TSR1	100	76.952	Propithecus_coquereli
ENSSHAG00000011394	TSR1	100	77.419	ENSPVAG00000002162	TSR1	100	77.667	Pteropus_vampyrus
ENSSHAG00000011394	TSR1	99	56.679	ENSPNYG00000016163	tsr1	98	56.919	Pundamilia_nyererei
ENSSHAG00000011394	TSR1	99	56.340	ENSPNAG00000008659	tsr1	99	56.033	Pygocentrus_nattereri
ENSSHAG00000011394	TSR1	100	74.566	ENSRNOG00000002980	Tsr1	100	74.814	Rattus_norvegicus
ENSSHAG00000011394	TSR1	99	78.098	ENSRBIG00000040016	TSR1	99	78.070	Rhinopithecus_bieti
ENSSHAG00000011394	TSR1	99	78.098	ENSRROG00000030361	TSR1	99	78.070	Rhinopithecus_roxellana
ENSSHAG00000011394	TSR1	96	31.970	YDL060W	-	98	31.722	Saccharomyces_cerevisiae
ENSSHAG00000011394	TSR1	99	77.415	ENSSBOG00000020785	TSR1	99	77.039	Saimiri_boliviensis_boliviensis
ENSSHAG00000011394	TSR1	99	57.369	ENSSFOG00015005455	tsr1	99	57.021	Scleropages_formosus
ENSSHAG00000011394	TSR1	99	55.861	ENSSMAG00000009504	tsr1	99	56.459	Scophthalmus_maximus
ENSSHAG00000011394	TSR1	99	56.954	ENSSDUG00000012074	tsr1	98	57.914	Seriola_dumerili
ENSSHAG00000011394	TSR1	99	57.006	ENSSLDG00000002031	tsr1	98	57.725	Seriola_lalandi_dorsalis
ENSSHAG00000011394	TSR1	100	65.675	ENSSARG00000000759	TSR1	100	65.551	Sorex_araneus
ENSSHAG00000011394	TSR1	99	69.202	ENSSPUG00000007042	TSR1	99	69.325	Sphenodon_punctatus
ENSSHAG00000011394	TSR1	99	56.048	ENSSPAG00000021951	tsr1	99	56.563	Stegastes_partitus
ENSSHAG00000011394	TSR1	100	77.323	ENSSSCG00000038534	TSR1	100	77.599	Sus_scrofa
ENSSHAG00000011394	TSR1	90	71.995	ENSTGUG00000005883	TSR1	100	71.721	Taeniopygia_guttata
ENSSHAG00000011394	TSR1	99	57.022	ENSTRUG00000004665	tsr1	99	57.264	Takifugu_rubripes
ENSSHAG00000011394	TSR1	99	57.631	ENSTNIG00000016196	tsr1	99	57.509	Tetraodon_nigroviridis
ENSSHAG00000011394	TSR1	67	86.047	ENSTBEG00000015275	-	67	86.047	Tupaia_belangeri
ENSSHAG00000011394	TSR1	100	77.200	ENSTTRG00000001177	TSR1	100	77.351	Tursiops_truncatus
ENSSHAG00000011394	TSR1	100	76.980	ENSUAMG00000025160	TSR1	99	76.609	Ursus_americanus
ENSSHAG00000011394	TSR1	97	76.081	ENSUMAG00000009294	TSR1	99	75.700	Ursus_maritimus
ENSSHAG00000011394	TSR1	84	72.929	ENSVPAG00000000228	TSR1	100	73.117	Vicugna_pacos
ENSSHAG00000011394	TSR1	100	75.371	ENSVVUG00000021767	TSR1	100	75.649	Vulpes_vulpes
ENSSHAG00000011394	TSR1	99	58.557	ENSXETG00000023797	tsr1	100	58.653	Xenopus_tropicalis
ENSSHAG00000011394	TSR1	99	56.379	ENSXCOG00000009635	tsr1	99	56.622	Xiphophorus_couchianus
ENSSHAG00000011394	TSR1	99	55.516	ENSXMAG00000001397	tsr1	96	55.755	Xiphophorus_maculatus