EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000011486 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 5349 bases
Position: chrGL841507.1:856361-861709
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000013436	zf-C2H2	PF00096.26	1.4e-78	1	13
ENSSHAP00000013436	zf-C2H2	PF00096.26	1.4e-78	2	13
ENSSHAP00000013436	zf-C2H2	PF00096.26	1.4e-78	3	13
ENSSHAP00000013436	zf-C2H2	PF00096.26	1.4e-78	4	13
ENSSHAP00000013436	zf-C2H2	PF00096.26	1.4e-78	5	13
ENSSHAP00000013436	zf-C2H2	PF00096.26	1.4e-78	6	13
ENSSHAP00000013436	zf-C2H2	PF00096.26	1.4e-78	7	13
ENSSHAP00000013436	zf-C2H2	PF00096.26	1.4e-78	8	13
ENSSHAP00000013436	zf-C2H2	PF00096.26	1.4e-78	9	13
ENSSHAP00000013436	zf-C2H2	PF00096.26	1.4e-78	10	13
ENSSHAP00000013436	zf-C2H2	PF00096.26	1.4e-78	11	13
ENSSHAP00000013436	zf-C2H2	PF00096.26	1.4e-78	12	13
ENSSHAP00000013436	zf-C2H2	PF00096.26	1.4e-78	13	13
ENSSHAP00000013436	zf-met	PF12874.7	2.2e-08	1	3
ENSSHAP00000013436	zf-met	PF12874.7	2.2e-08	2	3
ENSSHAP00000013436	zf-met	PF12874.7	2.2e-08	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000013547	-	1800	-	ENSSHAP00000013436	600 (aa)	-	G3WDD1

Gene Model

Click here to download ENSSHAG00000011486's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000011486's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000011486	-	99	34.731	ENSSHAG00000003250	PRDM5	79	32.661
ENSSHAG00000011486	-	99	35.423	ENSSHAG00000011347	ZNF668	98	36.522
ENSSHAG00000011486	-	73	37.037	ENSSHAG00000012248	-	67	37.037
ENSSHAG00000011486	-	99	32.051	ENSSHAG00000003090	-	85	32.051
ENSSHAG00000011486	-	99	34.140	ENSSHAG00000014216	-	95	34.140
ENSSHAG00000011486	-	99	32.708	ENSSHAG00000001415	-	86	33.117
ENSSHAG00000011486	-	99	35.616	ENSSHAG00000004205	SNAI2	91	35.616
ENSSHAG00000011486	-	99	33.514	ENSSHAG00000015330	ZNF384	53	34.444
ENSSHAG00000011486	-	99	34.825	ENSSHAG00000003284	-	75	34.825
ENSSHAG00000011486	-	99	35.455	ENSSHAG00000016096	-	52	36.161
ENSSHAG00000011486	-	72	32.215	ENSSHAG00000003850	ZIC2	54	30.714
ENSSHAG00000011486	-	99	40.000	ENSSHAG00000011015	SNAI1	69	40.000
ENSSHAG00000011486	-	99	34.901	ENSSHAG00000018106	-	80	34.901
ENSSHAG00000011486	-	90	35.366	ENSSHAG00000004332	-	94	35.366
ENSSHAG00000011486	-	99	32.683	ENSSHAG00000009882	ZBTB16	88	32.222
ENSSHAG00000011486	-	99	37.387	ENSSHAG00000011906	-	64	37.387
ENSSHAG00000011486	-	99	37.993	ENSSHAG00000008255	ZNF768	77	38.012
ENSSHAG00000011486	-	99	37.387	ENSSHAG00000011714	-	61	37.168
ENSSHAG00000011486	-	99	39.683	ENSSHAG00000005922	-	51	40.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000011486	-	100	83.333	ENSAMEG00000007292	ZNF646	90	83.333	Ailuropoda_melanoleuca
ENSSHAG00000011486	-	99	47.858	ENSACAG00000007108	-	100	43.098	Anolis_carolinensis
ENSSHAG00000011486	-	100	87.037	ENSBTAG00000051572	ZNF646	90	84.483	Bos_taurus
ENSSHAG00000011486	-	100	85.185	ENSCAFG00000016793	ZNF646	98	42.511	Canis_familiaris
ENSSHAG00000011486	-	100	85.185	ENSCAFG00020018148	ZNF646	98	42.511	Canis_lupus_dingo
ENSSHAG00000011486	-	100	85.185	ENSCHIG00000017805	ZNF646	98	82.759	Capra_hircus
ENSSHAG00000011486	-	100	84.483	ENSTSYG00000032488	ZNF646	98	84.483	Carlito_syrichta
ENSSHAG00000011486	-	100	34.716	ENSCAPG00000006001	ZNF646	99	77.273	Cavia_aperea
ENSSHAG00000011486	-	100	41.111	ENSCPOG00000034707	ZNF646	92	36.211	Cavia_porcellus
ENSSHAG00000011486	-	99	87.037	ENSCCAG00000032171	ZNF646	97	81.667	Cebus_capucinus
ENSSHAG00000011486	-	100	39.874	ENSCLAG00000011313	ZNF646	99	42.208	Chinchilla_lanigera
ENSSHAG00000011486	-	99	56.863	ENSCPBG00000009878	ZNF646	97	49.333	Chrysemys_picta_bellii
ENSSHAG00000011486	-	100	87.037	ENSDNOG00000031266	ZNF646	98	84.483	Dasypus_novemcinctus
ENSSHAG00000011486	-	99	55.319	ENSDORG00000002988	Zfp646	98	42.529	Dipodomys_ordii
ENSSHAG00000011486	-	99	81.481	ENSEEUG00000007108	-	57	79.310	Erinaceus_europaeus
ENSSHAG00000011486	-	100	65.000	ENSFDAG00000013867	ZNF646	96	41.479	Fukomys_damarensis
ENSSHAG00000011486	-	99	48.780	ENSGAGG00000018925	ZNF646	96	48.780	Gopherus_agassizii
ENSSHAG00000011486	-	99	55.769	ENSHGLG00000021435	ZNF646	99	41.649	Heterocephalus_glaber_female
ENSSHAG00000011486	-	99	57.143	ENSLAFG00000032716	-	100	63.248	Loxodonta_africana
ENSSHAG00000011486	-	100	87.037	ENSMICG00000001613	ZNF646	99	84.483	Microcebus_murinus
ENSSHAG00000011486	-	100	53.642	ENSMODG00000001808	ZNF646	99	46.880	Monodelphis_domestica
ENSSHAG00000011486	-	99	52.941	MGP_CAROLIEiJ_G0030525	Zfp646	99	47.883	Mus_caroli
ENSSHAG00000011486	-	99	52.941	ENSMUSG00000049739	Zfp646	99	52.941	Mus_musculus
ENSSHAG00000011486	-	99	52.941	MGP_PahariEiJ_G0013732	Zfp646	99	52.941	Mus_pahari
ENSSHAG00000011486	-	100	57.143	MGP_SPRETEiJ_G0031639	Zfp646	99	57.143	Mus_spretus
ENSSHAG00000011486	-	100	83.333	ENSMPUG00000011652	ZNF646	98	78.333	Mustela_putorius_furo
ENSSHAG00000011486	-	99	61.538	ENSMLUG00000004755	ZNF646	87	41.722	Myotis_lucifugus
ENSSHAG00000011486	-	99	48.182	ENSNGAG00000002579	Zfp646	91	81.148	Nannospalax_galili
ENSSHAG00000011486	-	100	98.148	ENSMEUG00000007504	ZNF646	98	48.870	Notamacropus_eugenii
ENSSHAG00000011486	-	100	76.471	ENSOPRG00000016125	ZNF646	89	58.602	Ochotona_princeps
ENSSHAG00000011486	-	100	91.228	ENSOANG00000010373	-	98	45.482	Ornithorhynchus_anatinus
ENSSHAG00000011486	-	100	48.193	ENSOCUG00000014377	ZNF646	98	43.617	Oryctolagus_cuniculus
ENSSHAG00000011486	-	99	90.244	ENSOARG00000008496	ZNF646	99	82.759	Ovis_aries
ENSSHAG00000011486	-	100	85.185	ENSPTIG00000011248	ZNF646	89	82.759	Panthera_tigris_altaica
ENSSHAG00000011486	-	99	53.565	ENSPSIG00000005522	ZNF646	100	53.968	Pelodiscus_sinensis
ENSSHAG00000011486	-	100	100.000	ENSPCIG00000016711	ZNF646	91	58.228	Phascolarctos_cinereus
ENSSHAG00000011486	-	100	85.185	ENSSSCG00000026817	ZNF646	98	85.185	Sus_scrofa
ENSSHAG00000011486	-	100	87.037	ENSTTRG00000015538	ZNF646	91	84.483	Tursiops_truncatus
ENSSHAG00000011486	-	100	85.185	ENSUAMG00000008738	ZNF646	90	82.759	Ursus_americanus
ENSSHAG00000011486	-	99	85.185	ENSUMAG00000014051	ZNF646	90	82.759	Ursus_maritimus
ENSSHAG00000011486	-	100	41.542	ENSVVUG00000027718	ZNF646	98	43.697	Vulpes_vulpes
ENSSHAG00000011486	-	99	56.140	ENSXETG00000001910	znf646	100	56.140	Xenopus_tropicalis