EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000011600 (Gene tree)
Gene ID: 100932655
Gene Symbol: DDB1
Alias: -
Full Name: damage specific DNA binding protein 1
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 25694 bases
Position: chrGL864905.1:876284-901977
Accession: 2717
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000013570	CPSF_A	PF03178.15	6.1e-86	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000013682	DDB1-201	3816	-	ENSSHAP00000013570	1066 (aa)	-	G3WDR5

Gene Model

Click here to download ENSSHAG00000011600's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03420	Nucleotide excision repair	KEGG
shr04120	Ubiquitin mediated proteolysis	KEGG
shr05161	Hepatitis B	KEGG
shr05170	Human immunodeficiency virus 1 infection	KEGG
shr05203	Viral carcinogenesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000011600's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000011600	DDB1	100	96.916	ENSG00000167986	DDB1	92	99.338	Homo_sapiens
ENSSHAG00000011600	DDB1	97	89.070	ENSAPOG00000005036	ddb1	93	88.791	Acanthochromis_polyacanthus
ENSSHAG00000011600	DDB1	100	97.009	ENSAMEG00000016518	DDB1	94	97.009	Ailuropoda_melanoleuca
ENSSHAG00000011600	DDB1	85	89.231	ENSACIG00000020624	ddb1	93	89.231	Amphilophus_citrinellus
ENSSHAG00000011600	DDB1	100	88.785	ENSAOCG00000003066	ddb1	94	88.785	Amphiprion_ocellaris
ENSSHAG00000011600	DDB1	100	88.879	ENSAPEG00000000092	ddb1	94	88.879	Amphiprion_percula
ENSSHAG00000011600	DDB1	94	89.353	ENSATEG00000020571	ddb1	91	89.353	Anabas_testudineus
ENSSHAG00000011600	DDB1	100	95.527	ENSAPLG00000007174	DDB1	95	95.527	Anas_platyrhynchos
ENSSHAG00000011600	DDB1	100	95.327	ENSACAG00000017758	DDB1	94	95.327	Anolis_carolinensis
ENSSHAG00000011600	DDB1	100	96.916	ENSANAG00000021878	DDB1	94	96.916	Aotus_nancymaae
ENSSHAG00000011600	DDB1	100	89.252	ENSACLG00000012401	ddb1	94	89.252	Astatotilapia_calliptera
ENSSHAG00000011600	DDB1	100	97.009	ENSBTAG00000021569	DDB1	87	97.009	Bos_taurus
ENSSHAG00000011600	DDB1	99	37.054	WBGene00010890	ddb-1	93	36.962	Caenorhabditis_elegans
ENSSHAG00000011600	DDB1	100	96.916	ENSCJAG00000019319	DDB1	94	96.916	Callithrix_jacchus
ENSSHAG00000011600	DDB1	100	97.009	ENSCAFG00000016264	DDB1	94	97.009	Canis_familiaris
ENSSHAG00000011600	DDB1	94	96.517	ENSCAFG00020012722	DDB1	93	96.517	Canis_lupus_dingo
ENSSHAG00000011600	DDB1	100	97.009	ENSCHIG00000014969	DDB1	94	97.009	Capra_hircus
ENSSHAG00000011600	DDB1	100	96.542	ENSTSYG00000008027	DDB1	94	96.542	Carlito_syrichta
ENSSHAG00000011600	DDB1	100	96.355	ENSCAPG00000010786	DDB1	96	96.355	Cavia_aperea
ENSSHAG00000011600	DDB1	100	96.355	ENSCPOG00000009956	DDB1	94	96.355	Cavia_porcellus
ENSSHAG00000011600	DDB1	100	96.916	ENSCCAG00000035883	DDB1	94	96.916	Cebus_capucinus
ENSSHAG00000011600	DDB1	100	94.270	ENSCATG00000044495	DDB1	94	94.270	Cercocebus_atys
ENSSHAG00000011600	DDB1	100	96.449	ENSCLAG00000004126	DDB1	94	96.449	Chinchilla_lanigera
ENSSHAG00000011600	DDB1	100	96.916	ENSCSAG00000006392	DDB1	94	96.916	Chlorocebus_sabaeus
ENSSHAG00000011600	DDB1	87	92.235	ENSCHOG00000011377	DDB1	83	92.235	Choloepus_hoffmanni
ENSSHAG00000011600	DDB1	100	96.168	ENSCPBG00000017728	DDB1	94	96.168	Chrysemys_picta_bellii
ENSSHAG00000011600	DDB1	100	60.074	ENSCING00000007437	-	94	59.982	Ciona_intestinalis
ENSSHAG00000011600	DDB1	100	58.764	ENSCSAVG00000004783	-	100	58.595	Ciona_savignyi
ENSSHAG00000011600	DDB1	100	96.916	ENSCANG00000019948	DDB1	94	96.916	Colobus_angolensis_palliatus
ENSSHAG00000011600	DDB1	100	97.009	ENSCGRG00001016599	Ddb1	94	97.009	Cricetulus_griseus_chok1gshd
ENSSHAG00000011600	DDB1	100	97.009	ENSCGRG00000013427	Ddb1	94	97.009	Cricetulus_griseus_crigri
ENSSHAG00000011600	DDB1	93	88.900	ENSCSEG00000012499	ddb1	91	88.053	Cynoglossus_semilaevis
ENSSHAG00000011600	DDB1	94	89.033	ENSCVAG00000019531	ddb1	93	89.033	Cyprinodon_variegatus
ENSSHAG00000011600	DDB1	100	86.007	ENSDARG00000074431	ddb1	94	86.140	Danio_rerio
ENSSHAG00000011600	DDB1	94	96.219	ENSDNOG00000014884	DDB1	91	96.219	Dasypus_novemcinctus
ENSSHAG00000011600	DDB1	83	99.338	ENSDORG00000000127	Ddb1	93	99.338	Dipodomys_ordii
ENSSHAG00000011600	DDB1	99	60.019	FBgn0260962	pic	94	59.795	Drosophila_melanogaster
ENSSHAG00000011600	DDB1	69	92.391	ENSETEG00000001053	-	65	92.391	Echinops_telfairi
ENSSHAG00000011600	DDB1	76	82.540	ENSEBUG00000014593	ddb1	90	82.540	Eptatretus_burgeri
ENSSHAG00000011600	DDB1	100	96.822	ENSEASG00005008184	DDB1	94	96.822	Equus_asinus_asinus
ENSSHAG00000011600	DDB1	100	96.916	ENSECAG00000012136	DDB1	94	96.916	Equus_caballus
ENSSHAG00000011600	DDB1	84	96.970	ENSEEUG00000003194	DDB1	79	96.970	Erinaceus_europaeus
ENSSHAG00000011600	DDB1	100	88.879	ENSELUG00000023868	ddb1	94	88.879	Esox_lucius
ENSSHAG00000011600	DDB1	100	97.009	ENSFCAG00000029716	DDB1	94	97.009	Felis_catus
ENSSHAG00000011600	DDB1	100	95.620	ENSFALG00000011981	DDB1	94	95.620	Ficedula_albicollis
ENSSHAG00000011600	DDB1	100	96.542	ENSFDAG00000005128	DDB1	94	96.542	Fukomys_damarensis
ENSSHAG00000011600	DDB1	91	90.980	ENSFHEG00000022133	ddb1	91	90.980	Fundulus_heteroclitus
ENSSHAG00000011600	DDB1	84	90.635	ENSGMOG00000019386	ddb1	94	90.635	Gadus_morhua
ENSSHAG00000011600	DDB1	100	95.607	ENSGALG00000042333	DDB1	94	95.607	Gallus_gallus
ENSSHAG00000011600	DDB1	94	88.734	ENSGAFG00000013142	ddb1	93	88.734	Gambusia_affinis
ENSSHAG00000011600	DDB1	95	88.247	ENSGACG00000017182	ddb1	94	88.247	Gasterosteus_aculeatus
ENSSHAG00000011600	DDB1	100	96.262	ENSGAGG00000014124	DDB1	99	96.262	Gopherus_agassizii
ENSSHAG00000011600	DDB1	100	96.916	ENSGGOG00000004052	DDB1	94	96.916	Gorilla_gorilla
ENSSHAG00000011600	DDB1	100	89.252	ENSHBUG00000008873	ddb1	99	89.252	Haplochromis_burtoni
ENSSHAG00000011600	DDB1	100	96.262	ENSHGLG00000018430	DDB1	94	96.262	Heterocephalus_glaber_female
ENSSHAG00000011600	DDB1	100	95.140	ENSHGLG00100014475	DDB1	94	95.140	Heterocephalus_glaber_male
ENSSHAG00000011600	DDB1	94	88.569	ENSHCOG00000018670	ddb1	92	88.569	Hippocampus_comes
ENSSHAG00000011600	DDB1	100	88.224	ENSIPUG00000005612	DDB1	94	88.224	Ictalurus_punctatus
ENSSHAG00000011600	DDB1	100	96.916	ENSSTOG00000007552	DDB1	94	96.916	Ictidomys_tridecemlineatus
ENSSHAG00000011600	DDB1	100	96.916	ENSJJAG00000017769	Ddb1	94	96.916	Jaculus_jaculus
ENSSHAG00000011600	DDB1	94	88.833	ENSKMAG00000002315	ddb1	93	88.833	Kryptolebias_marmoratus
ENSSHAG00000011600	DDB1	85	89.011	ENSLBEG00000017065	ddb1	94	89.011	Labrus_bergylta
ENSSHAG00000011600	DDB1	100	91.791	ENSLACG00000017611	DDB1	94	91.791	Latimeria_chalumnae
ENSSHAG00000011600	DDB1	90	80.900	ENSLOCG00000000012	ddb1	93	80.900	Lepisosteus_oculatus
ENSSHAG00000011600	DDB1	100	96.729	ENSLAFG00000011513	DDB1	94	96.729	Loxodonta_africana
ENSSHAG00000011600	DDB1	100	96.916	ENSMFAG00000042035	DDB1	94	96.916	Macaca_fascicularis
ENSSHAG00000011600	DDB1	99	96.890	ENSMMUG00000002691	DDB1	94	96.890	Macaca_mulatta
ENSSHAG00000011600	DDB1	100	96.916	ENSMNEG00000031559	DDB1	94	96.916	Macaca_nemestrina
ENSSHAG00000011600	DDB1	100	96.916	ENSMLEG00000044136	DDB1	94	96.916	Mandrillus_leucophaeus
ENSSHAG00000011600	DDB1	100	89.252	ENSMAMG00000014372	ddb1	94	89.252	Mastacembelus_armatus
ENSSHAG00000011600	DDB1	100	89.159	ENSMZEG00005013835	ddb1	94	89.159	Maylandia_zebra
ENSSHAG00000011600	DDB1	100	95.247	ENSMGAG00000004990	DDB1	99	95.247	Meleagris_gallopavo
ENSSHAG00000011600	DDB1	100	97.009	ENSMAUG00000012926	Ddb1	94	97.009	Mesocricetus_auratus
ENSSHAG00000011600	DDB1	100	96.916	ENSMICG00000013703	DDB1	94	96.916	Microcebus_murinus
ENSSHAG00000011600	DDB1	100	96.822	ENSMOCG00000020499	Ddb1	94	96.822	Microtus_ochrogaster
ENSSHAG00000011600	DDB1	85	88.901	ENSMMOG00000001758	ddb1	93	88.901	Mola_mola
ENSSHAG00000011600	DDB1	99	87.153	ENSMODG00000020353	DDB1	94	87.153	Monodelphis_domestica
ENSSHAG00000011600	DDB1	100	89.159	ENSMALG00000014071	ddb1	94	89.159	Monopterus_albus
ENSSHAG00000011600	DDB1	100	97.009	MGP_CAROLIEiJ_G0022695	Ddb1	94	97.009	Mus_caroli
ENSSHAG00000011600	DDB1	100	97.009	ENSMUSG00000024740	Ddb1	94	97.009	Mus_musculus
ENSSHAG00000011600	DDB1	100	97.009	MGP_PahariEiJ_G0014189	Ddb1	94	97.009	Mus_pahari
ENSSHAG00000011600	DDB1	100	97.103	MGP_SPRETEiJ_G0023609	Ddb1	94	97.103	Mus_spretus
ENSSHAG00000011600	DDB1	100	93.458	ENSMPUG00000014200	DDB1	94	93.458	Mustela_putorius_furo
ENSSHAG00000011600	DDB1	100	96.916	ENSMLUG00000013232	DDB1	94	96.916	Myotis_lucifugus
ENSSHAG00000011600	DDB1	100	96.729	ENSNGAG00000009384	Ddb1	94	96.729	Nannospalax_galili
ENSSHAG00000011600	DDB1	100	89.346	ENSNBRG00000019581	ddb1	94	89.346	Neolamprologus_brichardi
ENSSHAG00000011600	DDB1	100	93.623	ENSNLEG00000002022	DDB1	94	93.623	Nomascus_leucogenys
ENSSHAG00000011600	DDB1	92	100.000	ENSMEUG00000001099	DDB1	88	100.000	Notamacropus_eugenii
ENSSHAG00000011600	DDB1	96	88.458	ENSOPRG00000008254	DDB1	90	88.458	Ochotona_princeps
ENSSHAG00000011600	DDB1	100	96.262	ENSODEG00000002419	DDB1	94	96.262	Octodon_degus
ENSSHAG00000011600	DDB1	100	89.252	ENSONIG00000005804	ddb1	94	89.252	Oreochromis_niloticus
ENSSHAG00000011600	DDB1	96	96.221	ENSOANG00000004897	DDB1	100	96.221	Ornithorhynchus_anatinus
ENSSHAG00000011600	DDB1	100	96.916	ENSOCUG00000001667	DDB1	94	96.916	Oryctolagus_cuniculus
ENSSHAG00000011600	DDB1	95	87.855	ENSORLG00000001399	ddb1	91	89.083	Oryzias_latipes
ENSSHAG00000011600	DDB1	95	87.855	ENSORLG00020001277	ddb1	91	87.855	Oryzias_latipes_hni
ENSSHAG00000011600	DDB1	94	88.955	ENSORLG00015002080	ddb1	92	88.955	Oryzias_latipes_hsok
ENSSHAG00000011600	DDB1	96	87.537	ENSOMEG00000006181	ddb1	93	87.537	Oryzias_melastigma
ENSSHAG00000011600	DDB1	100	96.916	ENSOGAG00000016103	DDB1	94	96.916	Otolemur_garnettii
ENSSHAG00000011600	DDB1	98	96.961	ENSOARG00000011716	DDB1	91	96.961	Ovis_aries
ENSSHAG00000011600	DDB1	100	96.916	ENSPPAG00000035343	DDB1	94	96.916	Pan_paniscus
ENSSHAG00000011600	DDB1	100	97.009	ENSPPRG00000013300	DDB1	94	97.009	Panthera_pardus
ENSSHAG00000011600	DDB1	100	97.009	ENSPTIG00000006909	DDB1	94	97.009	Panthera_tigris_altaica
ENSSHAG00000011600	DDB1	100	96.916	ENSPTRG00000003737	DDB1	94	96.916	Pan_troglodytes
ENSSHAG00000011600	DDB1	100	96.916	ENSPANG00000000242	DDB1	94	96.916	Papio_anubis
ENSSHAG00000011600	DDB1	94	88.933	ENSPKIG00000019213	ddb1	88	88.933	Paramormyrops_kingsleyae
ENSSHAG00000011600	DDB1	100	95.709	ENSPSIG00000013275	DDB1	95	95.709	Pelodiscus_sinensis
ENSSHAG00000011600	DDB1	85	88.901	ENSPMGG00000021179	ddb1	93	88.901	Periophthalmus_magnuspinnatus
ENSSHAG00000011600	DDB1	100	97.009	ENSPEMG00000012241	Ddb1	94	97.009	Peromyscus_maniculatus_bairdii
ENSSHAG00000011600	DDB1	90	84.917	ENSPMAG00000008479	ddb1	95	84.917	Petromyzon_marinus
ENSSHAG00000011600	DDB1	100	97.196	ENSPCIG00000002643	DDB1	94	97.196	Phascolarctos_cinereus
ENSSHAG00000011600	DDB1	100	88.515	ENSPFOG00000002768	ddb1	94	88.515	Poecilia_formosa
ENSSHAG00000011600	DDB1	100	88.318	ENSPLAG00000017227	ddb1	94	88.318	Poecilia_latipinna
ENSSHAG00000011600	DDB1	100	88.318	ENSPMEG00000011398	ddb1	94	88.318	Poecilia_mexicana
ENSSHAG00000011600	DDB1	94	88.856	ENSPREG00000004440	ddb1	91	88.856	Poecilia_reticulata
ENSSHAG00000011600	DDB1	100	91.914	ENSPPYG00000003193	DDB1	94	91.914	Pongo_abelii
ENSSHAG00000011600	DDB1	84	98.955	ENSPCAG00000011040	DDB1	79	98.955	Procavia_capensis
ENSSHAG00000011600	DDB1	100	95.336	ENSPCOG00000015176	DDB1	94	95.336	Propithecus_coquereli
ENSSHAG00000011600	DDB1	100	96.822	ENSPVAG00000003847	DDB1	94	96.822	Pteropus_vampyrus
ENSSHAG00000011600	DDB1	52	90.214	ENSPNYG00000010482	ddb1	100	90.214	Pundamilia_nyererei
ENSSHAG00000011600	DDB1	94	88.933	ENSPNAG00000006635	ddb1	91	88.933	Pygocentrus_nattereri
ENSSHAG00000011600	DDB1	100	96.916	ENSRNOG00000020715	Ddb1	94	96.916	Rattus_norvegicus
ENSSHAG00000011600	DDB1	100	96.916	ENSRBIG00000033611	DDB1	94	96.916	Rhinopithecus_bieti
ENSSHAG00000011600	DDB1	100	96.916	ENSRROG00000041407	DDB1	94	96.916	Rhinopithecus_roxellana
ENSSHAG00000011600	DDB1	100	97.009	ENSSBOG00000019775	DDB1	94	97.009	Saimiri_boliviensis_boliviensis
ENSSHAG00000011600	DDB1	94	89.066	ENSSFOG00015011151	ddb1	90	89.066	Scleropages_formosus
ENSSHAG00000011600	DDB1	100	88.785	ENSSMAG00000009495	ddb1	94	88.785	Scophthalmus_maximus
ENSSHAG00000011600	DDB1	100	89.065	ENSSDUG00000004642	ddb1	94	89.065	Seriola_dumerili
ENSSHAG00000011600	DDB1	100	89.065	ENSSLDG00000015804	ddb1	94	89.065	Seriola_lalandi_dorsalis
ENSSHAG00000011600	DDB1	68	100.000	ENSSARG00000003290	-	66	100.000	Sorex_araneus
ENSSHAG00000011600	DDB1	100	95.981	ENSSPUG00000019338	DDB1	94	95.981	Sphenodon_punctatus
ENSSHAG00000011600	DDB1	94	89.154	ENSSPAG00000009888	ddb1	93	89.154	Stegastes_partitus
ENSSHAG00000011600	DDB1	100	95.888	ENSSSCG00000013094	DDB1	94	95.888	Sus_scrofa
ENSSHAG00000011600	DDB1	100	95.421	ENSTGUG00000006414	DDB1	94	95.421	Taeniopygia_guttata
ENSSHAG00000011600	DDB1	94	87.737	ENSTRUG00000016682	ddb1	92	87.737	Takifugu_rubripes
ENSSHAG00000011600	DDB1	93	82.934	ENSTNIG00000009565	ddb1	99	82.934	Tetraodon_nigroviridis
ENSSHAG00000011600	DDB1	94	92.820	ENSTTRG00000011055	DDB1	90	92.820	Tursiops_truncatus
ENSSHAG00000011600	DDB1	94	96.517	ENSUAMG00000017793	DDB1	87	96.517	Ursus_americanus
ENSSHAG00000011600	DDB1	94	96.517	ENSUMAG00000011788	DDB1	92	96.517	Ursus_maritimus
ENSSHAG00000011600	DDB1	91	100.000	ENSVPAG00000007963	DDB1	87	100.000	Vicugna_pacos
ENSSHAG00000011600	DDB1	100	96.916	ENSVVUG00000004987	DDB1	94	96.916	Vulpes_vulpes
ENSSHAG00000011600	DDB1	100	90.968	ENSXETG00000008820	ddb1	94	90.968	Xenopus_tropicalis
ENSSHAG00000011600	DDB1	85	88.571	ENSXCOG00000013956	ddb1	93	88.571	Xiphophorus_couchianus
ENSSHAG00000011600	DDB1	94	88.734	ENSXMAG00000000022	ddb1	93	88.734	Xiphophorus_maculatus