EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000011646 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 833 bases
Position: chrGL841421.1:882473-883305
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000013629	zf-met	PF12874.7	5.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000013741	-	792	-	ENSSHAP00000013629	264 (aa)	-	G3WDX4

Gene Model

Click here to download ENSSHAG00000011646's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000011646's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000011646	-	80	89.238	ENSSHAG00000011677	-	78	87.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000011646	-	77	88.372	ENSG00000104897	SF3A2	82	91.892	Homo_sapiens
ENSSHAG00000011646	-	78	80.455	ENSAPOG00000003916	sf3a2	65	85.417	Acanthochromis_polyacanthus
ENSSHAG00000011646	-	77	88.837	ENSAMEG00000005469	SF3A2	60	89.892	Ailuropoda_melanoleuca
ENSSHAG00000011646	-	77	80.556	ENSACIG00000018153	sf3a2	65	84.896	Amphilophus_citrinellus
ENSSHAG00000011646	-	78	80.455	ENSAOCG00000015960	sf3a2	65	85.417	Amphiprion_ocellaris
ENSSHAG00000011646	-	78	80.455	ENSAPEG00000012336	sf3a2	65	85.417	Amphiprion_percula
ENSSHAG00000011646	-	78	80.909	ENSATEG00000015449	sf3a2	65	84.896	Anabas_testudineus
ENSSHAG00000011646	-	56	84.472	ENSANAG00000034031	-	77	84.472	Aotus_nancymaae
ENSSHAG00000011646	-	85	78.481	ENSACLG00000002356	sf3a2	65	84.896	Astatotilapia_calliptera
ENSSHAG00000011646	-	79	81.448	ENSAMXG00000032428	sf3a2	64	85.417	Astyanax_mexicanus
ENSSHAG00000011646	-	70	69.036	WBGene00008683	repo-1	86	70.312	Caenorhabditis_elegans
ENSSHAG00000011646	-	55	85.443	ENSCAPG00000003402	-	78	85.443	Cavia_aperea
ENSSHAG00000011646	-	77	88.372	ENSCCAG00000009812	SF3A2	86	75.956	Cebus_capucinus
ENSSHAG00000011646	-	78	84.615	ENSCPBG00000018569	SF3A2	61	87.500	Chrysemys_picta_bellii
ENSSHAG00000011646	-	69	76.531	ENSCING00000003319	zf(matrin)-2	55	77.487	Ciona_intestinalis
ENSSHAG00000011646	-	71	75.000	ENSCSAVG00000007862	-	51	76.963	Ciona_savignyi
ENSSHAG00000011646	-	77	88.837	ENSCGRG00000011089	Sf3a2	81	85.443	Cricetulus_griseus_crigri
ENSSHAG00000011646	-	86	77.083	ENSCSEG00000014308	sf3a2	68	84.375	Cynoglossus_semilaevis
ENSSHAG00000011646	-	77	79.630	ENSCVAG00000021349	sf3a2	65	85.417	Cyprinodon_variegatus
ENSSHAG00000011646	-	78	80.909	ENSDARG00000021107	sf3a2	69	85.938	Danio_rerio
ENSSHAG00000011646	-	77	69.266	FBgn0036314	Sf3a2	73	75.521	Drosophila_melanogaster
ENSSHAG00000011646	-	77	82.028	ENSELUG00000008471	sf3a2	63	84.375	Esox_lucius
ENSSHAG00000011646	-	77	88.837	ENSFCAG00000030476	SF3A2	63	89.531	Felis_catus
ENSSHAG00000011646	-	55	85.443	ENSFDAG00000020911	-	81	85.443	Fukomys_damarensis
ENSSHAG00000011646	-	77	81.019	ENSFHEG00000002392	sf3a2	66	85.417	Fundulus_heteroclitus
ENSSHAG00000011646	-	77	79.724	ENSGMOG00000012186	sf3a2	64	84.896	Gadus_morhua
ENSSHAG00000011646	-	78	83.258	ENSGALG00000021679	SF3A2	61	87.500	Gallus_gallus
ENSSHAG00000011646	-	71	82.090	ENSGAFG00000008478	sf3a2	65	85.417	Gambusia_affinis
ENSSHAG00000011646	-	79	80.543	ENSGACG00000015255	sf3a2	66	85.417	Gasterosteus_aculeatus
ENSSHAG00000011646	-	70	83.417	ENSGAGG00000008500	SF3A2	63	86.471	Gopherus_agassizii
ENSSHAG00000011646	-	85	78.481	ENSHBUG00000021796	sf3a2	65	84.896	Haplochromis_burtoni
ENSSHAG00000011646	-	77	88.837	ENSHGLG00000015102	SF3A2	76	85.535	Heterocephalus_glaber_female
ENSSHAG00000011646	-	78	89.041	ENSHGLG00100000418	SF3A2	76	85.535	Heterocephalus_glaber_male
ENSSHAG00000011646	-	87	78.926	ENSHCOG00000001223	sf3a2	66	85.417	Hippocampus_comes
ENSSHAG00000011646	-	78	80.909	ENSIPUG00000019071	sf3a2	64	85.938	Ictalurus_punctatus
ENSSHAG00000011646	-	77	88.837	ENSSTOG00000007495	SF3A2	78	78.710	Ictidomys_tridecemlineatus
ENSSHAG00000011646	-	77	88.837	ENSJJAG00000010635	Sf3a2	82	85.443	Jaculus_jaculus
ENSSHAG00000011646	-	78	77.828	ENSKMAG00000006295	sf3a2	65	84.896	Kryptolebias_marmoratus
ENSSHAG00000011646	-	78	80.909	ENSLBEG00000000677	sf3a2	65	85.417	Labrus_bergylta
ENSSHAG00000011646	-	78	83.710	ENSLACG00000008744	SF3A2	61	87.500	Latimeria_chalumnae
ENSSHAG00000011646	-	74	82.212	ENSLOCG00000005835	sf3a2	62	85.417	Lepisosteus_oculatus
ENSSHAG00000011646	-	78	80.455	ENSMAMG00000009881	sf3a2	65	85.417	Mastacembelus_armatus
ENSSHAG00000011646	-	85	78.481	ENSMZEG00005025609	sf3a2	65	84.896	Maylandia_zebra
ENSSHAG00000011646	-	78	83.258	ENSMGAG00000001950	SF3A2	61	87.500	Meleagris_gallopavo
ENSSHAG00000011646	-	55	85.443	ENSMAUG00000005644	-	81	85.443	Mesocricetus_auratus
ENSSHAG00000011646	-	85	78.667	ENSMMOG00000010657	sf3a2	67	85.556	Mola_mola
ENSSHAG00000011646	-	100	91.697	ENSMODG00000004681	SF3A2	56	91.697	Monodelphis_domestica
ENSSHAG00000011646	-	78	80.455	ENSMALG00000020442	sf3a2	65	84.375	Monopterus_albus
ENSSHAG00000011646	-	77	88.837	MGP_CAROLIEiJ_G0015602	-	81	85.443	Mus_caroli
ENSSHAG00000011646	-	77	88.837	ENSMUSG00000020211	Sf3a2	81	85.443	Mus_musculus
ENSSHAG00000011646	-	77	88.837	MGP_PahariEiJ_G0031015	-	81	85.443	Mus_pahari
ENSSHAG00000011646	-	77	88.837	MGP_SPRETEiJ_G0016420	-	81	85.443	Mus_spretus
ENSSHAG00000011646	-	77	88.837	ENSMPUG00000006956	SF3A2	60	89.892	Mustela_putorius_furo
ENSSHAG00000011646	-	55	85.443	ENSNGAG00000023309	-	81	85.443	Nannospalax_galili
ENSSHAG00000011646	-	78	80.365	ENSNBRG00000019872	sf3a2	65	84.896	Neolamprologus_brichardi
ENSSHAG00000011646	-	57	83.436	ENSODEG00000013722	-	87	83.436	Octodon_degus
ENSSHAG00000011646	-	78	80.365	ENSONIG00000010198	sf3a2	65	84.896	Oreochromis_niloticus
ENSSHAG00000011646	-	64	86.740	ENSOANG00000013649	-	87	86.264	Ornithorhynchus_anatinus
ENSSHAG00000011646	-	87	76.860	ENSORLG00000015301	sf3a2	66	84.896	Oryzias_latipes
ENSSHAG00000011646	-	87	76.860	ENSORLG00020017235	sf3a2	66	84.896	Oryzias_latipes_hni
ENSSHAG00000011646	-	77	80.093	ENSORLG00015017116	sf3a2	66	84.896	Oryzias_latipes_hsok
ENSSHAG00000011646	-	77	80.093	ENSOMEG00000020860	sf3a2	66	84.896	Oryzias_melastigma
ENSSHAG00000011646	-	77	88.837	ENSOARG00000014357	SF3A2	53	88.837	Ovis_aries
ENSSHAG00000011646	-	78	82.727	ENSPKIG00000009487	sf3a2	61	85.938	Paramormyrops_kingsleyae
ENSSHAG00000011646	-	78	83.408	ENSPSIG00000010839	SF3A2	61	86.598	Pelodiscus_sinensis
ENSSHAG00000011646	-	68	84.375	ENSPMGG00000017249	sf3a2	71	82.967	Periophthalmus_magnuspinnatus
ENSSHAG00000011646	-	69	83.590	ENSPFOG00000015945	sf3a2	65	84.896	Poecilia_formosa
ENSSHAG00000011646	-	68	84.456	ENSPLAG00000010052	sf3a2	65	84.896	Poecilia_latipinna
ENSSHAG00000011646	-	69	83.590	ENSPMEG00000000184	sf3a2	65	84.896	Poecilia_mexicana
ENSSHAG00000011646	-	68	84.456	ENSPREG00000017808	sf3a2	65	84.896	Poecilia_reticulata
ENSSHAG00000011646	-	85	78.481	ENSPNYG00000006928	sf3a2	65	84.896	Pundamilia_nyererei
ENSSHAG00000011646	-	78	80.909	ENSPNAG00000027582	sf3a2	64	85.417	Pygocentrus_nattereri
ENSSHAG00000011646	-	84	79.574	ENSSFOG00015010920	sf3a2	55	85.417	Scleropages_formosus
ENSSHAG00000011646	-	78	80.822	ENSSMAG00000002629	sf3a2	67	84.896	Scophthalmus_maximus
ENSSHAG00000011646	-	81	79.736	ENSSDUG00000015810	sf3a2	66	85.417	Seriola_dumerili
ENSSHAG00000011646	-	81	79.736	ENSSLDG00000010874	sf3a2	66	85.417	Seriola_lalandi_dorsalis
ENSSHAG00000011646	-	78	81.364	ENSSPAG00000004960	sf3a2	65	85.417	Stegastes_partitus
ENSSHAG00000011646	-	64	86.740	ENSTGUG00000000305	SF3A2	88	86.740	Taeniopygia_guttata
ENSSHAG00000011646	-	77	80.645	ENSTRUG00000009045	sf3a2	66	85.417	Takifugu_rubripes
ENSSHAG00000011646	-	77	80.645	ENSTNIG00000015318	sf3a2	66	84.896	Tetraodon_nigroviridis
ENSSHAG00000011646	-	71	81.592	ENSXCOG00000008222	sf3a2	66	84.896	Xiphophorus_couchianus
ENSSHAG00000011646	-	71	81.592	ENSXMAG00000029068	sf3a2	66	84.896	Xiphophorus_maculatus