EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000011677 (Gene tree)
Gene ID: 100918863
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 12233 bases
Position: chrGL841421.1:887863-900095
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000013663	zf-met	PF12874.7	5.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000013775	-	741	-	ENSSHAP00000013663	247 (aa)	-	G3WE08

Gene Model

Click here to download ENSSHAG00000011677's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000011677's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000011677	-	78	87.500	ENSSHAG00000011646	-	80	89.238

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000011677	-	100	98.381	ENSG00000104897	SF3A2	100	99.259	Homo_sapiens
ENSSHAG00000011677	-	99	88.934	ENSAPOG00000003916	sf3a2	83	88.211	Acanthochromis_polyacanthus
ENSSHAG00000011677	-	100	98.785	ENSAMEG00000005469	SF3A2	53	98.785	Ailuropoda_melanoleuca
ENSSHAG00000011677	-	97	89.583	ENSACIG00000018153	sf3a2	73	94.444	Amphilophus_citrinellus
ENSSHAG00000011677	-	99	88.934	ENSAOCG00000015960	sf3a2	83	87.805	Amphiprion_ocellaris
ENSSHAG00000011677	-	99	88.934	ENSAPEG00000012336	sf3a2	83	87.805	Amphiprion_percula
ENSSHAG00000011677	-	99	89.754	ENSATEG00000015449	sf3a2	83	88.211	Anabas_testudineus
ENSSHAG00000011677	-	75	97.838	ENSANAG00000034031	-	89	97.838	Aotus_nancymaae
ENSSHAG00000011677	-	99	87.747	ENSACLG00000002356	sf3a2	73	94.907	Astatotilapia_calliptera
ENSSHAG00000011677	-	99	90.612	ENSAMXG00000032428	sf3a2	81	88.980	Astyanax_mexicanus
ENSSHAG00000011677	-	100	98.785	ENSBTAG00000025452	SF3A2	52	98.785	Bos_taurus
ENSSHAG00000011677	-	89	76.923	WBGene00008683	repo-1	97	78.241	Caenorhabditis_elegans
ENSSHAG00000011677	-	100	98.381	ENSCJAG00000013206	-	53	98.381	Callithrix_jacchus
ENSSHAG00000011677	-	100	98.785	ENSCAFG00000019414	SF3A2	52	98.785	Canis_familiaris
ENSSHAG00000011677	-	100	98.785	ENSCAFG00020018153	SF3A2	52	98.785	Canis_lupus_dingo
ENSSHAG00000011677	-	100	98.785	ENSCHIG00000018323	SF3A2	52	98.785	Capra_hircus
ENSSHAG00000011677	-	74	99.451	ENSCAPG00000003402	-	90	99.451	Cavia_aperea
ENSSHAG00000011677	-	100	98.785	ENSCPOG00000032868	SF3A2	55	98.785	Cavia_porcellus
ENSSHAG00000011677	-	100	98.381	ENSCCAG00000009812	SF3A2	98	88.942	Cebus_capucinus
ENSSHAG00000011677	-	100	98.381	ENSCATG00000038453	SF3A2	53	98.381	Cercocebus_atys
ENSSHAG00000011677	-	100	98.785	ENSCLAG00000008987	SF3A2	55	98.785	Chinchilla_lanigera
ENSSHAG00000011677	-	100	98.381	ENSCSAG00000011717	SF3A2	52	98.381	Chlorocebus_sabaeus
ENSSHAG00000011677	-	100	96.371	ENSCPBG00000018569	SF3A2	78	96.371	Chrysemys_picta_bellii
ENSSHAG00000011677	-	89	84.091	ENSCING00000003319	zf(matrin)-2	62	85.116	Ciona_intestinalis
ENSSHAG00000011677	-	91	82.589	ENSCSAVG00000007862	-	57	84.651	Ciona_savignyi
ENSSHAG00000011677	-	100	98.381	ENSCANG00000024451	SF3A2	53	98.381	Colobus_angolensis_palliatus
ENSSHAG00000011677	-	100	98.785	ENSCGRG00001001802	Sf3a2	51	98.785	Cricetulus_griseus_chok1gshd
ENSSHAG00000011677	-	100	98.785	ENSCGRG00000011089	Sf3a2	94	99.451	Cricetulus_griseus_crigri
ENSSHAG00000011677	-	99	87.600	ENSCSEG00000014308	sf3a2	76	93.981	Cynoglossus_semilaevis
ENSSHAG00000011677	-	97	88.750	ENSCVAG00000021349	sf3a2	89	81.369	Cyprinodon_variegatus
ENSSHAG00000011677	-	99	89.344	ENSDARG00000021107	sf3a2	78	94.907	Danio_rerio
ENSSHAG00000011677	-	100	98.381	ENSDORG00000014445	Sf3a2	53	98.381	Dipodomys_ordii
ENSSHAG00000011677	-	87	85.185	FBgn0036314	Sf3a2	82	85.185	Drosophila_melanogaster
ENSSHAG00000011677	-	100	98.785	ENSEASG00005021972	SF3A2	53	98.785	Equus_asinus_asinus
ENSSHAG00000011677	-	98	91.701	ENSELUG00000008471	sf3a2	80	88.618	Esox_lucius
ENSSHAG00000011677	-	100	98.381	ENSFCAG00000030476	SF3A2	56	98.381	Felis_catus
ENSSHAG00000011677	-	76	98.396	ENSFALG00000013785	-	57	92.166	Ficedula_albicollis
ENSSHAG00000011677	-	74	99.451	ENSFDAG00000020911	-	93	99.451	Fukomys_damarensis
ENSSHAG00000011677	-	97	89.583	ENSFHEG00000002392	sf3a2	74	94.444	Fundulus_heteroclitus
ENSSHAG00000011677	-	98	88.797	ENSGMOG00000012186	sf3a2	81	87.805	Gadus_morhua
ENSSHAG00000011677	-	100	96.774	ENSGALG00000021679	SF3A2	79	96.774	Gallus_gallus
ENSSHAG00000011677	-	91	91.111	ENSGAFG00000008478	sf3a2	73	94.444	Gambusia_affinis
ENSSHAG00000011677	-	99	89.796	ENSGACG00000015255	sf3a2	74	95.370	Gasterosteus_aculeatus
ENSSHAG00000011677	-	80	93.467	ENSGAGG00000008500	SF3A2	75	93.069	Gopherus_agassizii
ENSSHAG00000011677	-	100	98.381	ENSGGOG00000006613	SF3A2	53	98.381	Gorilla_gorilla
ENSSHAG00000011677	-	99	87.747	ENSHBUG00000021796	sf3a2	73	94.907	Haplochromis_burtoni
ENSSHAG00000011677	-	100	98.785	ENSHGLG00000015102	SF3A2	88	99.454	Heterocephalus_glaber_female
ENSSHAG00000011677	-	98	98.765	ENSHGLG00100000418	SF3A2	88	99.454	Heterocephalus_glaber_male
ENSSHAG00000011677	-	99	89.388	ENSHCOG00000001223	sf3a2	74	94.907	Hippocampus_comes
ENSSHAG00000011677	-	99	89.344	ENSIPUG00000019071	sf3a2	72	94.907	Ictalurus_punctatus
ENSSHAG00000011677	-	100	98.785	ENSSTOG00000007495	SF3A2	96	86.224	Ictidomys_tridecemlineatus
ENSSHAG00000011677	-	100	98.785	ENSJJAG00000010635	Sf3a2	96	98.378	Jaculus_jaculus
ENSSHAG00000011677	-	99	86.939	ENSKMAG00000006295	sf3a2	73	94.444	Kryptolebias_marmoratus
ENSSHAG00000011677	-	99	90.164	ENSLBEG00000000677	sf3a2	83	88.618	Labrus_bergylta
ENSSHAG00000011677	-	99	92.653	ENSLACG00000008744	SF3A2	79	93.117	Latimeria_chalumnae
ENSSHAG00000011677	-	94	92.241	ENSLOCG00000005835	sf3a2	79	90.244	Lepisosteus_oculatus
ENSSHAG00000011677	-	100	98.381	ENSMFAG00000002638	SF3A2	53	98.381	Macaca_fascicularis
ENSSHAG00000011677	-	100	98.381	ENSMMUG00000010111	SF3A2	54	98.381	Macaca_mulatta
ENSSHAG00000011677	-	100	98.381	ENSMNEG00000036916	SF3A2	52	98.381	Macaca_nemestrina
ENSSHAG00000011677	-	99	88.934	ENSMAMG00000009881	sf3a2	83	88.211	Mastacembelus_armatus
ENSSHAG00000011677	-	99	87.747	ENSMZEG00005025609	sf3a2	73	94.907	Maylandia_zebra
ENSSHAG00000011677	-	100	96.774	ENSMGAG00000001950	SF3A2	79	96.774	Meleagris_gallopavo
ENSSHAG00000011677	-	74	99.451	ENSMAUG00000005644	-	94	99.451	Mesocricetus_auratus
ENSSHAG00000011677	-	100	98.381	ENSMICG00000015443	SF3A2	53	98.381	Microcebus_murinus
ENSSHAG00000011677	-	100	98.785	ENSMOCG00000007216	Sf3a2	54	98.785	Microtus_ochrogaster
ENSSHAG00000011677	-	99	80.488	ENSMMOG00000010657	sf3a2	77	85.714	Mola_mola
ENSSHAG00000011677	-	100	99.595	ENSMODG00000004681	SF3A2	50	99.595	Monodelphis_domestica
ENSSHAG00000011677	-	99	89.344	ENSMALG00000020442	sf3a2	83	87.805	Monopterus_albus
ENSSHAG00000011677	-	100	98.785	MGP_CAROLIEiJ_G0015602	-	94	99.451	Mus_caroli
ENSSHAG00000011677	-	100	98.785	ENSMUSG00000020211	Sf3a2	94	99.451	Mus_musculus
ENSSHAG00000011677	-	100	98.785	MGP_PahariEiJ_G0031015	-	94	99.451	Mus_pahari
ENSSHAG00000011677	-	100	98.785	MGP_SPRETEiJ_G0016420	-	94	99.451	Mus_spretus
ENSSHAG00000011677	-	100	97.976	ENSMPUG00000006956	SF3A2	53	97.976	Mustela_putorius_furo
ENSSHAG00000011677	-	100	98.381	ENSMLUG00000004426	-	56	98.381	Myotis_lucifugus
ENSSHAG00000011677	-	74	98.901	ENSNGAG00000023309	-	94	98.901	Nannospalax_galili
ENSSHAG00000011677	-	98	89.712	ENSNBRG00000019872	sf3a2	73	94.907	Neolamprologus_brichardi
ENSSHAG00000011677	-	76	97.326	ENSODEG00000013722	-	100	97.326	Octodon_degus
ENSSHAG00000011677	-	98	89.300	ENSONIG00000010198	sf3a2	73	94.444	Oreochromis_niloticus
ENSSHAG00000011677	-	83	98.544	ENSOANG00000013649	-	98	98.544	Ornithorhynchus_anatinus
ENSSHAG00000011677	-	99	84.231	ENSORLG00000015301	sf3a2	74	93.519	Oryzias_latipes
ENSSHAG00000011677	-	99	84.231	ENSORLG00020017235	sf3a2	74	93.519	Oryzias_latipes_hni
ENSSHAG00000011677	-	97	88.333	ENSORLG00015017116	sf3a2	74	93.519	Oryzias_latipes_hsok
ENSSHAG00000011677	-	97	88.750	ENSOMEG00000020860	sf3a2	74	93.981	Oryzias_melastigma
ENSSHAG00000011677	-	100	98.381	ENSOGAG00000033389	SF3A2	53	98.381	Otolemur_garnettii
ENSSHAG00000011677	-	100	98.785	ENSOARG00000014357	SF3A2	61	98.785	Ovis_aries
ENSSHAG00000011677	-	100	84.211	ENSPPAG00000037864	-	52	84.211	Pan_paniscus
ENSSHAG00000011677	-	100	98.381	ENSPPRG00000007798	SF3A2	52	98.381	Panthera_pardus
ENSSHAG00000011677	-	100	98.381	ENSPTRG00000010227	SF3A2	53	98.381	Pan_troglodytes
ENSSHAG00000011677	-	100	98.381	ENSPANG00000007949	SF3A2	53	98.381	Papio_anubis
ENSSHAG00000011677	-	99	91.393	ENSPKIG00000009487	sf3a2	78	89.837	Paramormyrops_kingsleyae
ENSSHAG00000011677	-	99	93.522	ENSPSIG00000010839	SF3A2	79	93.200	Pelodiscus_sinensis
ENSSHAG00000011677	-	87	93.981	ENSPMGG00000017249	sf3a2	80	93.204	Periophthalmus_magnuspinnatus
ENSSHAG00000011677	-	100	98.785	ENSPEMG00000021288	Sf3a2	53	98.785	Peromyscus_maniculatus_bairdii
ENSSHAG00000011677	-	87	94.444	ENSPFOG00000015945	sf3a2	73	94.444	Poecilia_formosa
ENSSHAG00000011677	-	87	94.444	ENSPLAG00000010052	sf3a2	73	94.444	Poecilia_latipinna
ENSSHAG00000011677	-	87	94.444	ENSPMEG00000000184	sf3a2	73	94.444	Poecilia_mexicana
ENSSHAG00000011677	-	87	94.444	ENSPREG00000017808	sf3a2	73	94.444	Poecilia_reticulata
ENSSHAG00000011677	-	100	98.381	ENSPPYG00000009342	SF3A2	54	98.381	Pongo_abelii
ENSSHAG00000011677	-	79	98.469	ENSPCAG00000014513	SF3A2	53	88.259	Procavia_capensis
ENSSHAG00000011677	-	100	98.381	ENSPCOG00000020295	SF3A2	55	98.381	Propithecus_coquereli
ENSSHAG00000011677	-	99	87.747	ENSPNYG00000006928	sf3a2	73	94.907	Pundamilia_nyererei
ENSSHAG00000011677	-	99	90.164	ENSPNAG00000027582	sf3a2	81	89.024	Pygocentrus_nattereri
ENSSHAG00000011677	-	100	98.381	ENSRNOG00000019349	Sf3a2	52	98.381	Rattus_norvegicus
ENSSHAG00000011677	-	100	98.381	ENSRBIG00000026709	SF3A2	54	98.381	Rhinopithecus_bieti
ENSSHAG00000011677	-	100	98.381	ENSRROG00000034440	SF3A2	53	98.381	Rhinopithecus_roxellana
ENSSHAG00000011677	-	99	90.244	ENSSFOG00015010920	sf3a2	70	89.024	Scleropages_formosus
ENSSHAG00000011677	-	98	90.123	ENSSMAG00000002629	sf3a2	75	94.907	Scophthalmus_maximus
ENSSHAG00000011677	-	99	90.164	ENSSDUG00000015810	sf3a2	74	94.907	Seriola_dumerili
ENSSHAG00000011677	-	99	90.164	ENSSLDG00000010874	sf3a2	74	94.907	Seriola_lalandi_dorsalis
ENSSHAG00000011677	-	99	89.754	ENSSPAG00000004960	sf3a2	83	88.618	Stegastes_partitus
ENSSHAG00000011677	-	100	97.976	ENSSSCG00000039757	SF3A2	53	97.976	Sus_scrofa
ENSSHAG00000011677	-	83	98.049	ENSTGUG00000000305	SF3A2	100	98.049	Taeniopygia_guttata
ENSSHAG00000011677	-	98	89.212	ENSTRUG00000009045	sf3a2	75	94.444	Takifugu_rubripes
ENSSHAG00000011677	-	98	89.212	ENSTNIG00000015318	sf3a2	75	93.981	Tetraodon_nigroviridis
ENSSHAG00000011677	-	91	82.301	ENSTTRG00000010177	-	53	83.806	Tursiops_truncatus
ENSSHAG00000011677	-	100	98.785	ENSVVUG00000002578	SF3A2	52	98.785	Vulpes_vulpes
ENSSHAG00000011677	-	99	93.033	ENSXETG00000024943	sf3a2	60	92.713	Xenopus_tropicalis
ENSSHAG00000011677	-	91	91.111	ENSXCOG00000008222	sf3a2	74	94.444	Xiphophorus_couchianus
ENSSHAG00000011677	-	91	91.111	ENSXMAG00000029068	sf3a2	74	94.444	Xiphophorus_maculatus