EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000011715 (Gene tree)
Gene ID: 100931116
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 70041 bases
Position: chrGL841550.1:893235-963275
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000013702	MMR_HSR1	PF01926.23	1.9e-08	1	1
ENSSHAP00000013703	MMR_HSR1	PF01926.23	2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000013816	-	2676	-	ENSSHAP00000013703	891 (aa)	-	G3WE48
ENSSHAT00000013815	-	2825	-	ENSSHAP00000013702	937 (aa)	-	G3WE47

Gene Model

Click here to download ENSSHAG00000011715's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000011715's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000011715	-	51	95.787	ENSG00000185739	SRL	99	96.744	Homo_sapiens
ENSSHAG00000011715	-	51	83.111	ENSAPOG00000018093	srl	99	84.091	Acanthochromis_polyacanthus
ENSSHAG00000011715	-	61	94.989	ENSAMEG00000010862	SRL	71	96.476	Ailuropoda_melanoleuca
ENSSHAG00000011715	-	51	83.111	ENSACIG00000015799	srl	99	83.149	Amphilophus_citrinellus
ENSSHAG00000011715	-	50	76.072	ENSACIG00000015419	SRL	99	76.072	Amphilophus_citrinellus
ENSSHAG00000011715	-	51	75.658	ENSAOCG00000017049	SRL	99	75.658	Amphiprion_ocellaris
ENSSHAG00000011715	-	51	71.429	ENSAPEG00000006533	SRL	99	72.368	Amphiprion_percula
ENSSHAG00000011715	-	51	83.333	ENSAPEG00000006911	srl	96	82.819	Amphiprion_percula
ENSSHAG00000011715	-	58	66.979	ENSACLG00000024674	SRL	64	68.269	Astatotilapia_calliptera
ENSSHAG00000011715	-	51	83.111	ENSACLG00000027685	srl	99	82.927	Astatotilapia_calliptera
ENSSHAG00000011715	-	53	68.008	ENSAMXG00000038693	SRL	99	73.230	Astyanax_mexicanus
ENSSHAG00000011715	-	51	82.444	ENSAMXG00000018789	srl	89	82.159	Astyanax_mexicanus
ENSSHAG00000011715	-	58	95.614	ENSBTAG00000001078	SRL	97	95.595	Bos_taurus
ENSSHAG00000011715	-	50	96.380	ENSCJAG00000019750	SRL	97	94.748	Callithrix_jacchus
ENSSHAG00000011715	-	55	95.815	ENSCAFG00000019233	SRL	85	95.624	Canis_familiaris
ENSSHAG00000011715	-	64	88.409	ENSCAFG00020025024	SRL	83	87.692	Canis_lupus_dingo
ENSSHAG00000011715	-	73	95.186	ENSCHIG00000017927	SRL	89	96.044	Capra_hircus
ENSSHAG00000011715	-	51	97.118	ENSTSYG00000007919	SRL	99	97.674	Carlito_syrichta
ENSSHAG00000011715	-	51	96.272	ENSCPOG00000012643	SRL	97	96.272	Cavia_porcellus
ENSSHAG00000011715	-	50	90.271	ENSCCAG00000032646	SRL	99	97.354	Cebus_capucinus
ENSSHAG00000011715	-	99	60.183	ENSCATG00000032227	-	97	94.967	Cercocebus_atys
ENSSHAG00000011715	-	51	96.053	ENSCLAG00000016242	SRL	97	96.053	Chinchilla_lanigera
ENSSHAG00000011715	-	52	93.926	ENSCSAG00000009635	-	80	94.348	Chlorocebus_sabaeus
ENSSHAG00000011715	-	51	97.409	ENSCHOG00000001618	SRL	89	97.409	Choloepus_hoffmanni
ENSSHAG00000011715	-	67	93.316	ENSCPBG00000026371	SRL	96	89.417	Chrysemys_picta_bellii
ENSSHAG00000011715	-	51	95.787	ENSCANG00000035872	SRL	99	96.744	Colobus_angolensis_palliatus
ENSSHAG00000011715	-	99	65.406	ENSCGRG00001016630	Srl	97	95.614	Cricetulus_griseus_chok1gshd
ENSSHAG00000011715	-	99	65.406	ENSCGRG00000005458	Srl	97	95.614	Cricetulus_griseus_crigri
ENSSHAG00000011715	-	51	83.333	ENSCSEG00000016151	srl	97	82.637	Cynoglossus_semilaevis
ENSSHAG00000011715	-	51	71.903	ENSCSEG00000011866	SRL	91	72.124	Cynoglossus_semilaevis
ENSSHAG00000011715	-	51	84.667	ENSDARG00000104587	srl	96	84.667	Danio_rerio
ENSSHAG00000011715	-	79	95.991	ENSDNOG00000011643	SRL	99	87.719	Dasypus_novemcinctus
ENSSHAG00000011715	-	51	95.787	ENSDORG00000014807	Srl	97	94.956	Dipodomys_ordii
ENSSHAG00000011715	-	76	95.778	ENSEASG00005000942	SRL	55	95.154	Equus_asinus_asinus
ENSSHAG00000011715	-	58	97.608	ENSECAG00000024219	SRL	97	94.978	Equus_caballus
ENSSHAG00000011715	-	51	78.602	ENSELUG00000015616	srl	97	79.025	Esox_lucius
ENSSHAG00000011715	-	99	63.982	ENSFCAG00000022075	SRL	97	95.405	Felis_catus
ENSSHAG00000011715	-	51	91.170	ENSFALG00000004328	SRL	65	90.611	Ficedula_albicollis
ENSSHAG00000011715	-	51	96.896	ENSFDAG00000006199	SRL	97	96.053	Fukomys_damarensis
ENSSHAG00000011715	-	51	91.353	ENSGALG00000038884	SRL	96	91.353	Gallus_gallus
ENSSHAG00000011715	-	50	83.784	ENSGAFG00000000010	srl	99	82.237	Gambusia_affinis
ENSSHAG00000011715	-	99	61.222	ENSGGOG00000011312	-	96	95.385	Gorilla_gorilla
ENSSHAG00000011715	-	51	73.060	ENSHBUG00000015710	SRL	64	68.077	Haplochromis_burtoni
ENSSHAG00000011715	-	51	83.111	ENSHBUG00000007581	srl	99	82.927	Haplochromis_burtoni
ENSSHAG00000011715	-	51	96.272	ENSHGLG00000015271	SRL	97	96.272	Heterocephalus_glaber_female
ENSSHAG00000011715	-	51	96.272	ENSHGLG00100019378	SRL	97	96.272	Heterocephalus_glaber_male
ENSSHAG00000011715	-	51	82.889	ENSHCOG00000008687	srl	98	83.900	Hippocampus_comes
ENSSHAG00000011715	-	56	64.428	ENSHCOG00000001012	SRL	58	65.789	Hippocampus_comes
ENSSHAG00000011715	-	51	80.702	ENSIPUG00000012513	srl	97	80.702	Ictalurus_punctatus
ENSSHAG00000011715	-	99	64.255	ENSSTOG00000021151	-	97	95.833	Ictidomys_tridecemlineatus
ENSSHAG00000011715	-	51	96.674	ENSJJAG00000016400	Srl	97	95.833	Jaculus_jaculus
ENSSHAG00000011715	-	50	82.960	ENSKMAG00000014115	srl	93	85.952	Kryptolebias_marmoratus
ENSSHAG00000011715	-	51	82.198	ENSLBEG00000026643	srl	97	82.198	Labrus_bergylta
ENSSHAG00000011715	-	51	85.556	ENSLACG00000002825	SRL	99	85.588	Latimeria_chalumnae
ENSSHAG00000011715	-	51	84.176	ENSLOCG00000002644	srl	97	84.176	Lepisosteus_oculatus
ENSSHAG00000011715	-	99	66.186	ENSLAFG00000006329	SRL	51	96.460	Loxodonta_africana
ENSSHAG00000011715	-	85	93.709	ENSMNEG00000019236	-	96	95.374	Macaca_nemestrina
ENSSHAG00000011715	-	51	87.805	ENSMLEG00000032156	SRL	96	87.225	Mandrillus_leucophaeus
ENSSHAG00000011715	-	58	66.979	ENSMZEG00005004010	SRL	65	68.269	Maylandia_zebra
ENSSHAG00000011715	-	51	83.111	ENSMZEG00005004548	srl	99	82.927	Maylandia_zebra
ENSSHAG00000011715	-	51	91.353	ENSMGAG00000009342	SRL	95	93.085	Meleagris_gallopavo
ENSSHAG00000011715	-	93	77.888	ENSMICG00000032307	SRL	97	95.186	Microcebus_murinus
ENSSHAG00000011715	-	51	95.787	ENSMOCG00000008208	Srl	97	94.956	Microtus_ochrogaster
ENSSHAG00000011715	-	50	82.812	ENSMMOG00000013970	srl	99	82.812	Mola_mola
ENSSHAG00000011715	-	100	82.116	ENSMODG00000016380	-	100	81.356	Monodelphis_domestica
ENSSHAG00000011715	-	51	82.301	ENSMALG00000005039	srl	99	82.301	Monopterus_albus
ENSSHAG00000011715	-	99	65.618	MGP_CAROLIEiJ_G0020400	Srl	97	95.614	Mus_caroli
ENSSHAG00000011715	-	99	65.574	ENSMUSG00000022519	Srl	97	95.614	Mus_musculus
ENSSHAG00000011715	-	99	64.833	MGP_PahariEiJ_G0016108	Srl	99	63.174	Mus_pahari
ENSSHAG00000011715	-	99	64.339	MGP_SPRETEiJ_G0021294	Srl	97	95.614	Mus_spretus
ENSSHAG00000011715	-	99	64.136	ENSMPUG00000015025	SRL	55	95.815	Mustela_putorius_furo
ENSSHAG00000011715	-	74	80.993	ENSMLUG00000030733	SRL	99	86.476	Myotis_lucifugus
ENSSHAG00000011715	-	51	96.009	ENSNGAG00000019741	Srl	97	95.175	Nannospalax_galili
ENSSHAG00000011715	-	51	83.111	ENSNBRG00000023775	srl	96	83.111	Neolamprologus_brichardi
ENSSHAG00000011715	-	57	67.173	ENSNBRG00000002422	SRL	64	68.269	Neolamprologus_brichardi
ENSSHAG00000011715	-	51	89.135	ENSNLEG00000029051	SRL	96	88.571	Nomascus_leucogenys
ENSSHAG00000011715	-	71	90.044	ENSOPRG00000000477	-	81	90.044	Ochotona_princeps
ENSSHAG00000011715	-	51	96.231	ENSODEG00000013256	SRL	97	95.395	Octodon_degus
ENSSHAG00000011715	-	51	82.927	ENSONIG00000005192	srl	96	82.927	Oreochromis_niloticus
ENSSHAG00000011715	-	51	96.026	ENSOCUG00000025140	SRL	50	96.026	Oryctolagus_cuniculus
ENSSHAG00000011715	-	53	80.128	ENSORLG00000008291	srl	91	86.528	Oryzias_latipes
ENSSHAG00000011715	-	51	74.945	ENSORLG00000015064	SRL	99	74.945	Oryzias_latipes
ENSSHAG00000011715	-	51	75.166	ENSORLG00020018173	SRL	99	75.166	Oryzias_latipes_hni
ENSSHAG00000011715	-	53	79.915	ENSORLG00020019784	srl	79	86.269	Oryzias_latipes_hni
ENSSHAG00000011715	-	51	75.388	ENSORLG00015019063	SRL	99	75.388	Oryzias_latipes_hsok
ENSSHAG00000011715	-	53	79.487	ENSORLG00015009342	srl	96	79.487	Oryzias_latipes_hsok
ENSSHAG00000011715	-	53	80.128	ENSOMEG00000010006	srl	97	83.827	Oryzias_melastigma
ENSSHAG00000011715	-	50	72.826	ENSOMEG00000005682	SRL	53	72.826	Oryzias_melastigma
ENSSHAG00000011715	-	80	77.888	ENSOGAG00000029266	SRL	99	87.084	Otolemur_garnettii
ENSSHAG00000011715	-	59	95.186	ENSOARG00000003074	SRL	84	96.044	Ovis_aries
ENSSHAG00000011715	-	99	61.082	ENSPPAG00000024919	-	99	96.744	Pan_paniscus
ENSSHAG00000011715	-	50	96.833	ENSPPRG00000010274	SRL	99	97.209	Panthera_pardus
ENSSHAG00000011715	-	50	96.833	ENSPTIG00000015162	SRL	99	97.209	Panthera_tigris_altaica
ENSSHAG00000011715	-	99	61.175	ENSPTRG00000007712	SRL	99	96.744	Pan_troglodytes
ENSSHAG00000011715	-	51	94.956	ENSPANG00000013804	SRL	98	95.595	Papio_anubis
ENSSHAG00000011715	-	58	64.909	ENSPKIG00000024974	SRL	88	75.510	Paramormyrops_kingsleyae
ENSSHAG00000011715	-	51	82.781	ENSPKIG00000006405	srl	96	82.781	Paramormyrops_kingsleyae
ENSSHAG00000011715	-	100	57.068	ENSPSIG00000008586	SRL	51	90.708	Pelodiscus_sinensis
ENSSHAG00000011715	-	51	83.556	ENSPMGG00000021081	srl	97	83.556	Periophthalmus_magnuspinnatus
ENSSHAG00000011715	-	51	96.231	ENSPEMG00000015842	Srl	97	95.395	Peromyscus_maniculatus_bairdii
ENSSHAG00000011715	-	51	98.448	ENSPCIG00000012128	SRL	100	97.812	Phascolarctos_cinereus
ENSSHAG00000011715	-	50	81.579	ENSPFOG00000011408	srl	96	80.514	Poecilia_formosa
ENSSHAG00000011715	-	51	82.018	ENSPLAG00000008017	srl	99	82.018	Poecilia_latipinna
ENSSHAG00000011715	-	50	83.559	ENSPMEG00000006745	srl	99	82.018	Poecilia_mexicana
ENSSHAG00000011715	-	50	83.333	ENSPREG00000007751	srl	98	83.333	Poecilia_reticulata
ENSSHAG00000011715	-	62	93.939	ENSPCAG00000003378	-	85	94.760	Procavia_capensis
ENSSHAG00000011715	-	51	96.231	ENSPCOG00000023135	SRL	99	97.442	Propithecus_coquereli
ENSSHAG00000011715	-	65	97.118	ENSPVAG00000006586	SRL	91	88.359	Pteropus_vampyrus
ENSSHAG00000011715	-	51	83.111	ENSPNYG00000001200	srl	99	82.927	Pundamilia_nyererei
ENSSHAG00000011715	-	58	66.979	ENSPNYG00000003423	SRL	64	68.269	Pundamilia_nyererei
ENSSHAG00000011715	-	51	81.333	ENSPNAG00000023106	srl	96	81.333	Pygocentrus_nattereri
ENSSHAG00000011715	-	70	79.621	ENSRNOG00000005269	Srl	98	64.554	Rattus_norvegicus
ENSSHAG00000011715	-	99	62.833	ENSRBIG00000042358	SRL	98	61.506	Rhinopithecus_bieti
ENSSHAG00000011715	-	99	62.378	ENSSBOG00000029273	SRL	97	94.748	Saimiri_boliviensis_boliviensis
ENSSHAG00000011715	-	59	67.864	ENSSFOG00015021327	SRL	53	72.727	Scleropages_formosus
ENSSHAG00000011715	-	50	82.812	ENSSMAG00000016274	srl	98	82.812	Scophthalmus_maximus
ENSSHAG00000011715	-	51	83.556	ENSSLDG00000022024	srl	97	83.705	Seriola_lalandi_dorsalis
ENSSHAG00000011715	-	51	90.466	ENSSPUG00000016859	SRL	99	90.508	Sphenodon_punctatus
ENSSHAG00000011715	-	86	72.214	ENSSSCG00000007949	SRL	100	95.768	Sus_scrofa
ENSSHAG00000011715	-	51	91.574	ENSTGUG00000003951	-	99	91.611	Taeniopygia_guttata
ENSSHAG00000011715	-	51	81.978	ENSTRUG00000006005	srl	97	81.978	Takifugu_rubripes
ENSSHAG00000011715	-	51	82.444	ENSTNIG00000009739	srl	97	81.758	Tetraodon_nigroviridis
ENSSHAG00000011715	-	71	95.227	ENSTTRG00000002709	-	69	95.227	Tursiops_truncatus
ENSSHAG00000011715	-	58	96.256	ENSUAMG00000005701	SRL	90	89.084	Ursus_americanus
ENSSHAG00000011715	-	58	96.035	ENSUMAG00000002574	SRL	90	88.889	Ursus_maritimus
ENSSHAG00000011715	-	64	88.016	ENSVVUG00000016331	-	87	64.189	Vulpes_vulpes
ENSSHAG00000011715	-	51	89.111	ENSXETG00000017313	srl	99	89.111	Xenopus_tropicalis
ENSSHAG00000011715	-	50	83.784	ENSXMAG00000004625	srl	90	83.784	Xiphophorus_maculatus