EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000011808 (Gene tree)
Gene ID: 100918187
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 15462 bases
Position: chrGL841556.1:911998-927459
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000013808	eIF-3c_N	PF05470.12	4.1e-267	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000013925	-	6469	-	ENSSHAP00000013808	881 (aa)	-	G3WEF3

Gene Model

Click here to download ENSSHAG00000011808's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000011808's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000011808	-	100	93.778	ENSG00000205609	EIF3CL	96	93.891	Homo_sapiens
ENSSHAG00000011808	-	100	94.677	ENSG00000184110	EIF3C	100	98.734	Homo_sapiens
ENSSHAG00000011808	-	99	75.805	ENSAPOG00000024092	eif3c	88	85.714	Acanthochromis_polyacanthus
ENSSHAG00000011808	-	100	94.677	ENSAMEG00000015454	-	96	94.677	Ailuropoda_melanoleuca
ENSSHAG00000011808	-	99	73.815	ENSACIG00000015082	eif3c	90	83.388	Amphilophus_citrinellus
ENSSHAG00000011808	-	99	76.080	ENSAOCG00000021466	eif3c	90	83.744	Amphiprion_ocellaris
ENSSHAG00000011808	-	99	76.080	ENSAPEG00000010521	eif3c	90	83.744	Amphiprion_percula
ENSSHAG00000011808	-	99	76.080	ENSATEG00000019001	eif3c	97	75.332	Anabas_testudineus
ENSSHAG00000011808	-	100	86.765	ENSACAG00000005937	-	96	86.199	Anolis_carolinensis
ENSSHAG00000011808	-	100	94.564	ENSANAG00000020640	-	96	94.564	Aotus_nancymaae
ENSSHAG00000011808	-	82	84.127	ENSACLG00000009322	eif3c	88	82.812	Astatotilapia_calliptera
ENSSHAG00000011808	-	82	84.921	ENSACLG00000009347	eif3c	86	83.594	Astatotilapia_calliptera
ENSSHAG00000011808	-	99	76.651	ENSAMXG00000020949	eif3c	96	76.444	Astyanax_mexicanus
ENSSHAG00000011808	-	100	92.752	ENSBTAG00000006543	EIF3CL	96	93.771	Bos_taurus
ENSSHAG00000011808	-	99	42.088	WBGene00001226	eif-3.C	66	46.204	Caenorhabditis_elegans
ENSSHAG00000011808	-	100	94.451	ENSCJAG00000006341	-	96	94.451	Callithrix_jacchus
ENSSHAG00000011808	-	100	94.451	ENSCAFG00000017143	-	96	94.451	Canis_familiaris
ENSSHAG00000011808	-	100	94.564	ENSCAFG00020017587	-	96	94.564	Canis_lupus_dingo
ENSSHAG00000011808	-	100	92.639	ENSCHIG00000024795	-	96	93.884	Capra_hircus
ENSSHAG00000011808	-	100	94.451	ENSTSYG00000003486	-	96	94.451	Carlito_syrichta
ENSSHAG00000011808	-	99	85.892	ENSCAPG00000015887	-	100	85.779	Cavia_aperea
ENSSHAG00000011808	-	100	94.790	ENSCPOG00000007533	-	96	94.790	Cavia_porcellus
ENSSHAG00000011808	-	99	78.677	ENSCCAG00000029099	-	95	78.563	Cebus_capucinus
ENSSHAG00000011808	-	100	89.468	ENSCCAG00000027724	-	96	88.675	Cebus_capucinus
ENSSHAG00000011808	-	100	93.431	ENSCCAG00000034928	-	96	93.431	Cebus_capucinus
ENSSHAG00000011808	-	100	94.564	ENSCATG00000032673	-	96	94.564	Cercocebus_atys
ENSSHAG00000011808	-	99	94.558	ENSCLAG00000011094	-	96	94.558	Chinchilla_lanigera
ENSSHAG00000011808	-	100	94.564	ENSCSAG00000006297	-	96	94.564	Chlorocebus_sabaeus
ENSSHAG00000011808	-	57	82.239	ENSCHOG00000003120	-	88	82.239	Choloepus_hoffmanni
ENSSHAG00000011808	-	69	91.456	ENSCPBG00000012407	-	94	79.924	Chrysemys_picta_bellii
ENSSHAG00000011808	-	82	55.802	ENSCSAVG00000006744	-	93	56.469	Ciona_savignyi
ENSSHAG00000011808	-	100	94.564	ENSCANG00000033626	-	96	94.564	Colobus_angolensis_palliatus
ENSSHAG00000011808	-	100	93.658	ENSCGRG00001015265	EIF3C	96	93.658	Cricetulus_griseus_chok1gshd
ENSSHAG00000011808	-	99	75.367	ENSCSEG00000017770	eif3c	97	74.183	Cynoglossus_semilaevis
ENSSHAG00000011808	-	99	75.333	ENSCVAG00000005402	eif3c	97	75.277	Cyprinodon_variegatus
ENSSHAG00000011808	-	100	76.333	ENSDARG00000016443	eif3c	96	75.885	Danio_rerio
ENSSHAG00000011808	-	100	94.790	ENSDNOG00000031497	-	96	94.790	Dasypus_novemcinctus
ENSSHAG00000011808	-	100	94.677	ENSDORG00000016471	Eif3c	96	94.677	Dipodomys_ordii
ENSSHAG00000011808	-	98	50.058	FBgn0034258	eIF3c	67	54.386	Drosophila_melanogaster
ENSSHAG00000011808	-	91	95.928	ENSETEG00000013527	-	88	95.928	Echinops_telfairi
ENSSHAG00000011808	-	99	63.140	ENSEBUG00000001629	eif3c	96	63.252	Eptatretus_burgeri
ENSSHAG00000011808	-	100	94.677	ENSECAG00000008746	-	96	94.677	Equus_caballus
ENSSHAG00000011808	-	65	64.049	ENSEEUG00000000726	-	64	63.621	Erinaceus_europaeus
ENSSHAG00000011808	-	90	93.358	ENSEEUG00000006148	-	100	93.358	Erinaceus_europaeus
ENSSHAG00000011808	-	99	76.749	ENSELUG00000022257	eif3c	88	85.938	Esox_lucius
ENSSHAG00000011808	-	100	94.451	ENSFCAG00000015782	-	96	94.451	Felis_catus
ENSSHAG00000011808	-	100	94.564	ENSFDAG00000003588	-	96	94.564	Fukomys_damarensis
ENSSHAG00000011808	-	99	75.823	ENSFHEG00000014154	EIF3C	97	75.138	Fundulus_heteroclitus
ENSSHAG00000011808	-	96	75.263	ENSGMOG00000016885	eif3c	96	74.622	Gadus_morhua
ENSSHAG00000011808	-	96	77.686	ENSGACG00000007652	eif3c	96	76.190	Gasterosteus_aculeatus
ENSSHAG00000011808	-	96	85.714	ENSGAGG00000006666	-	100	84.770	Gopherus_agassizii
ENSSHAG00000011808	-	100	94.451	ENSGGOG00000026919	EIF3C	100	94.558	Gorilla_gorilla
ENSSHAG00000011808	-	55	95.753	ENSGGOG00000022677	-	99	95.753	Gorilla_gorilla
ENSSHAG00000011808	-	100	94.451	ENSHGLG00000011445	EIF3C	96	94.451	Heterocephalus_glaber_female
ENSSHAG00000011808	-	100	94.451	ENSHGLG00100000217	EIF3C	96	94.451	Heterocephalus_glaber_male
ENSSHAG00000011808	-	99	75.111	ENSHCOG00000019694	eif3c	96	75.278	Hippocampus_comes
ENSSHAG00000011808	-	100	75.111	ENSIPUG00000016878	eif3c	96	75.885	Ictalurus_punctatus
ENSSHAG00000011808	-	100	94.451	ENSSTOG00000021278	-	96	94.451	Ictidomys_tridecemlineatus
ENSSHAG00000011808	-	100	93.545	ENSJJAG00000012722	Eif3c	96	93.545	Jaculus_jaculus
ENSSHAG00000011808	-	98	77.509	ENSKMAG00000021662	eif3c	97	73.472	Kryptolebias_marmoratus
ENSSHAG00000011808	-	98	76.728	ENSLBEG00000023370	eif3c	96	75.055	Labrus_bergylta
ENSSHAG00000011808	-	98	79.931	ENSLACG00000000770	eif3c	96	80.631	Latimeria_chalumnae
ENSSHAG00000011808	-	99	94.211	ENSLAFG00000027426	-	96	94.211	Loxodonta_africana
ENSSHAG00000011808	-	100	94.564	ENSMFAG00000041930	-	96	94.564	Macaca_fascicularis
ENSSHAG00000011808	-	100	94.564	ENSMMUG00000011798	-	96	94.564	Macaca_mulatta
ENSSHAG00000011808	-	100	94.564	ENSMNEG00000023915	-	96	94.564	Macaca_nemestrina
ENSSHAG00000011808	-	100	94.564	ENSMLEG00000027529	-	96	94.564	Mandrillus_leucophaeus
ENSSHAG00000011808	-	99	75.748	ENSMAMG00000012512	eif3c	92	83.633	Mastacembelus_armatus
ENSSHAG00000011808	-	83	84.127	ENSMZEG00005013685	eif3c	88	82.812	Maylandia_zebra
ENSSHAG00000011808	-	99	72.645	ENSMZEG00005013699	eif3c	85	83.594	Maylandia_zebra
ENSSHAG00000011808	-	100	93.658	ENSMAUG00000010621	Eif3c	96	93.658	Mesocricetus_auratus
ENSSHAG00000011808	-	100	94.564	ENSMICG00000036748	-	96	94.564	Microcebus_murinus
ENSSHAG00000011808	-	98	93.380	ENSMOCG00000004204	Eif3c	94	93.380	Microtus_ochrogaster
ENSSHAG00000011808	-	99	72.841	ENSMMOG00000001572	eif3c	72	82.594	Mola_mola
ENSSHAG00000011808	-	100	98.865	ENSMODG00000015579	-	96	98.865	Monodelphis_domestica
ENSSHAG00000011808	-	83	85.600	ENSMALG00000008907	eif3c	88	85.039	Monopterus_albus
ENSSHAG00000011808	-	100	93.318	MGP_CAROLIEiJ_G0030451	Eif3c	96	92.525	Mus_caroli
ENSSHAG00000011808	-	100	93.318	ENSMUSG00000030738	Eif3c	96	92.525	Mus_musculus
ENSSHAG00000011808	-	100	92.639	MGP_PahariEiJ_G0013661	Eif3c	96	91.846	Mus_pahari
ENSSHAG00000011808	-	100	93.318	MGP_SPRETEiJ_G0031565	Eif3c	96	92.525	Mus_spretus
ENSSHAG00000011808	-	100	94.564	ENSMPUG00000012732	-	100	94.564	Mustela_putorius_furo
ENSSHAG00000011808	-	100	92.299	ENSMLUG00000015558	-	96	93.318	Myotis_lucifugus
ENSSHAG00000011808	-	76	72.024	ENSNGAG00000010901	-	82	72.619	Nannospalax_galili
ENSSHAG00000011808	-	100	94.224	ENSNGAG00000007177	-	96	94.224	Nannospalax_galili
ENSSHAG00000011808	-	100	79.710	ENSNLEG00000001425	-	96	78.595	Nomascus_leucogenys
ENSSHAG00000011808	-	92	64.557	ENSMEUG00000005317	-	95	74.138	Notamacropus_eugenii
ENSSHAG00000011808	-	99	80.774	ENSMEUG00000009939	-	96	81.023	Notamacropus_eugenii
ENSSHAG00000011808	-	100	94.224	ENSOPRG00000000931	-	96	94.224	Ochotona_princeps
ENSSHAG00000011808	-	100	94.337	ENSODEG00000013508	-	96	94.337	Octodon_degus
ENSSHAG00000011808	-	68	62.541	ENSONIG00000011434	eif3c	99	62.541	Oreochromis_niloticus
ENSSHAG00000011808	-	100	93.980	ENSOANG00000011410	-	96	93.980	Ornithorhynchus_anatinus
ENSSHAG00000011808	-	100	94.564	ENSOCUG00000022489	-	96	94.564	Oryctolagus_cuniculus
ENSSHAG00000011808	-	98	75.694	ENSORLG00000006318	eif3c	92	74.773	Oryzias_latipes
ENSSHAG00000011808	-	98	75.694	ENSORLG00020015713	eif3c	87	82.799	Oryzias_latipes_hni
ENSSHAG00000011808	-	98	75.810	ENSORLG00015013772	eif3c	97	73.585	Oryzias_latipes_hsok
ENSSHAG00000011808	-	99	75.167	ENSOMEG00000020450	eif3c	97	74.667	Oryzias_melastigma
ENSSHAG00000011808	-	100	94.337	ENSOGAG00000012737	-	96	94.337	Otolemur_garnettii
ENSSHAG00000011808	-	100	92.639	ENSOARG00000002892	-	96	93.884	Ovis_aries
ENSSHAG00000011808	-	100	94.451	ENSPPRG00000012336	-	96	94.451	Panthera_pardus
ENSSHAG00000011808	-	100	94.451	ENSPTIG00000011712	-	96	94.451	Panthera_tigris_altaica
ENSSHAG00000011808	-	100	94.564	ENSPANG00000021151	-	96	94.564	Papio_anubis
ENSSHAG00000011808	-	99	75.390	ENSPKIG00000002049	eif3c	96	75.390	Paramormyrops_kingsleyae
ENSSHAG00000011808	-	89	83.443	ENSPMGG00000005409	eif3c	91	83.443	Periophthalmus_magnuspinnatus
ENSSHAG00000011808	-	100	92.299	ENSPEMG00000010899	Eif3c	96	92.299	Peromyscus_maniculatus_bairdii
ENSSHAG00000011808	-	100	98.751	ENSPCIG00000025206	-	96	98.751	Phascolarctos_cinereus
ENSSHAG00000011808	-	99	75.831	ENSPFOG00000004476	eif3c	97	74.004	Poecilia_formosa
ENSSHAG00000011808	-	93	81.679	ENSPLAG00000017480	eif3c	100	73.618	Poecilia_latipinna
ENSSHAG00000011808	-	99	76.027	ENSPMEG00000019512	eif3c	97	74.197	Poecilia_mexicana
ENSSHAG00000011808	-	97	75.948	ENSPREG00000023139	eif3c	85	83.168	Poecilia_reticulata
ENSSHAG00000011808	-	100	91.619	ENSPPYG00000007227	-	96	91.619	Pongo_abelii
ENSSHAG00000011808	-	69	96.358	ENSPCAG00000012710	-	100	96.358	Procavia_capensis
ENSSHAG00000011808	-	100	94.904	ENSPCOG00000019289	-	96	94.904	Propithecus_coquereli
ENSSHAG00000011808	-	100	94.337	ENSPVAG00000005804	-	96	94.337	Pteropus_vampyrus
ENSSHAG00000011808	-	99	77.211	ENSPNAG00000024040	eif3c	96	76.570	Pygocentrus_nattereri
ENSSHAG00000011808	-	100	92.865	ENSRNOG00000018761	Eif3c	96	92.072	Rattus_norvegicus
ENSSHAG00000011808	-	96	94.601	ENSRBIG00000044009	-	94	90.492	Rhinopithecus_bieti
ENSSHAG00000011808	-	100	94.564	ENSRROG00000043626	-	96	94.564	Rhinopithecus_roxellana
ENSSHAG00000011808	-	73	30.755	YMR309C	-	82	30.727	Saccharomyces_cerevisiae
ENSSHAG00000011808	-	100	94.337	ENSSBOG00000032155	-	96	94.337	Saimiri_boliviensis_boliviensis
ENSSHAG00000011808	-	99	76.596	ENSSFOG00015021823	eif3c	96	77.018	Scleropages_formosus
ENSSHAG00000011808	-	96	78.012	ENSSMAG00000016638	eif3c	93	77.246	Scophthalmus_maximus
ENSSHAG00000011808	-	99	75.942	ENSSDUG00000023117	eif3c	97	75.277	Seriola_dumerili
ENSSHAG00000011808	-	99	75.610	ENSSLDG00000009706	eif3c	89	85.714	Seriola_lalandi_dorsalis
ENSSHAG00000011808	-	100	84.371	ENSSPUG00000016470	-	96	85.164	Sphenodon_punctatus
ENSSHAG00000011808	-	99	76.914	ENSSPAG00000000426	eif3c	96	76.351	Stegastes_partitus
ENSSHAG00000011808	-	100	94.451	ENSSSCG00000034927	-	96	94.451	Sus_scrofa
ENSSHAG00000011808	-	99	75.503	ENSTRUG00000008951	eif3c	95	75.362	Takifugu_rubripes
ENSSHAG00000011808	-	99	75.621	ENSTNIG00000015210	eif3c	96	75.366	Tetraodon_nigroviridis
ENSSHAG00000011808	-	100	94.224	ENSTTRG00000005880	-	96	94.224	Tursiops_truncatus
ENSSHAG00000011808	-	74	96.928	ENSUAMG00000001127	-	91	98.418	Ursus_americanus
ENSSHAG00000011808	-	100	94.790	ENSUMAG00000010927	-	96	94.790	Ursus_maritimus
ENSSHAG00000011808	-	100	92.978	ENSVVUG00000025970	-	96	92.978	Vulpes_vulpes
ENSSHAG00000011808	-	100	79.306	ENSXETG00000002941	eif3c	96	79.306	Xenopus_tropicalis
ENSSHAG00000011808	-	99	77.104	ENSXMAG00000013796	eif3c	97	75.335	Xiphophorus_maculatus