EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000011859 (Gene tree)
Gene ID: 100917961
Gene Symbol: RNPC3
Alias: FLJ20008|KIAA1839|RBM40|SNRNP65
Full Name: RNA binding region (RNP1%2C RRM) containing 3
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 22070 bases
Position: chrGL856984.1:920063-942132
Accession: 18666
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000013867	RRM_1	PF00076.22	6.1e-19	1	2
ENSSHAP00000013867	RRM_1	PF00076.22	6.1e-19	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000013984	RNPC3-201	1548	-	ENSSHAP00000013867	515 (aa)	-	G3WEL2

Gene Model

Click here to download ENSSHAG00000011859's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000011859's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000011859	RNPC3	99	78.876	ENSG00000185946	RNPC3	100	82.703	Homo_sapiens
ENSSHAG00000011859	RNPC3	95	56.487	ENSAPOG00000017371	rnpc3	97	57.287	Acanthochromis_polyacanthus
ENSSHAG00000011859	RNPC3	98	79.134	ENSAMEG00000001694	RNPC3	99	78.420	Ailuropoda_melanoleuca
ENSSHAG00000011859	RNPC3	95	53.800	ENSACIG00000021043	rnpc3	97	53.800	Amphilophus_citrinellus
ENSSHAG00000011859	RNPC3	95	56.238	ENSAOCG00000014052	rnpc3	95	56.800	Amphiprion_ocellaris
ENSSHAG00000011859	RNPC3	95	56.040	ENSAPEG00000008739	rnpc3	95	56.600	Amphiprion_percula
ENSSHAG00000011859	RNPC3	95	55.159	ENSATEG00000021263	rnpc3	97	55.159	Anabas_testudineus
ENSSHAG00000011859	RNPC3	88	70.705	ENSAPLG00000015605	RNPC3	100	71.366	Anas_platyrhynchos
ENSSHAG00000011859	RNPC3	94	68.930	ENSACAG00000002029	RNPC3	96	69.168	Anolis_carolinensis
ENSSHAG00000011859	RNPC3	99	77.713	ENSANAG00000019950	RNPC3	99	77.713	Aotus_nancymaae
ENSSHAG00000011859	RNPC3	95	55.466	ENSACLG00000014702	rnpc3	97	55.466	Astatotilapia_calliptera
ENSSHAG00000011859	RNPC3	95	54.397	ENSAMXG00000033372	rnpc3	96	56.033	Astyanax_mexicanus
ENSSHAG00000011859	RNPC3	99	78.488	ENSBTAG00000019091	RNPC3	99	78.488	Bos_taurus
ENSSHAG00000011859	RNPC3	99	75.969	ENSCJAG00000035686	RNPC3	99	76.550	Callithrix_jacchus
ENSSHAG00000011859	RNPC3	99	78.723	ENSCAFG00000019972	RNPC3	99	78.723	Canis_familiaris
ENSSHAG00000011859	RNPC3	99	78.917	ENSCAFG00020011300	RNPC3	99	78.917	Canis_lupus_dingo
ENSSHAG00000011859	RNPC3	99	78.101	ENSCHIG00000020361	RNPC3	99	78.101	Capra_hircus
ENSSHAG00000011859	RNPC3	99	76.357	ENSTSYG00000030256	RNPC3	99	76.357	Carlito_syrichta
ENSSHAG00000011859	RNPC3	84	67.890	ENSCAPG00000013600	RNPC3	97	68.213	Cavia_aperea
ENSSHAG00000011859	RNPC3	99	76.163	ENSCPOG00000031638	RNPC3	98	76.621	Cavia_porcellus
ENSSHAG00000011859	RNPC3	99	77.907	ENSCCAG00000024301	RNPC3	99	77.907	Cebus_capucinus
ENSSHAG00000011859	RNPC3	98	61.265	ENSCATG00000035930	-	98	60.277	Cercocebus_atys
ENSSHAG00000011859	RNPC3	99	79.029	ENSCATG00000002086	RNPC3	99	79.029	Cercocebus_atys
ENSSHAG00000011859	RNPC3	99	75.000	ENSCLAG00000005169	RNPC3	99	73.643	Chinchilla_lanigera
ENSSHAG00000011859	RNPC3	99	79.029	ENSCSAG00000001519	RNPC3	99	79.029	Chlorocebus_sabaeus
ENSSHAG00000011859	RNPC3	96	72.691	ENSCPBG00000028311	RNPC3	96	73.092	Chrysemys_picta_bellii
ENSSHAG00000011859	RNPC3	94	37.698	ENSCING00000021276	-	99	38.294	Ciona_intestinalis
ENSSHAG00000011859	RNPC3	93	38.462	ENSCSAVG00000002800	-	100	38.046	Ciona_savignyi
ENSSHAG00000011859	RNPC3	99	78.641	ENSCANG00000031444	RNPC3	99	78.641	Colobus_angolensis_palliatus
ENSSHAG00000011859	RNPC3	99	77.907	ENSCGRG00001019276	Rnpc3	100	77.907	Cricetulus_griseus_chok1gshd
ENSSHAG00000011859	RNPC3	88	78.319	ENSCGRG00000000053	Rnpc3	100	78.319	Cricetulus_griseus_crigri
ENSSHAG00000011859	RNPC3	95	53.939	ENSCSEG00000013475	rnpc3	96	53.939	Cynoglossus_semilaevis
ENSSHAG00000011859	RNPC3	95	53.693	ENSCVAG00000002645	rnpc3	97	53.693	Cyprinodon_variegatus
ENSSHAG00000011859	RNPC3	96	56.064	ENSDARG00000011247	rnpc3	91	65.294	Danio_rerio
ENSSHAG00000011859	RNPC3	99	78.101	ENSDNOG00000044555	-	99	78.101	Dasypus_novemcinctus
ENSSHAG00000011859	RNPC3	99	77.519	ENSDNOG00000047498	-	99	77.519	Dasypus_novemcinctus
ENSSHAG00000011859	RNPC3	100	75.629	ENSDORG00000027343	Rnpc3	100	75.629	Dipodomys_ordii
ENSSHAG00000011859	RNPC3	95	48.310	ENSEBUG00000002068	rnpc3	97	48.708	Eptatretus_burgeri
ENSSHAG00000011859	RNPC3	99	78.488	ENSEASG00005015957	RNPC3	99	78.488	Equus_asinus_asinus
ENSSHAG00000011859	RNPC3	99	78.682	ENSECAG00000021148	RNPC3	99	78.682	Equus_caballus
ENSSHAG00000011859	RNPC3	95	52.941	ENSELUG00000002264	rnpc3	97	54.118	Esox_lucius
ENSSHAG00000011859	RNPC3	99	78.723	ENSFCAG00000024312	RNPC3	99	78.723	Felis_catus
ENSSHAG00000011859	RNPC3	88	73.187	ENSFALG00000002580	RNPC3	100	72.747	Ficedula_albicollis
ENSSHAG00000011859	RNPC3	99	76.938	ENSFDAG00000019948	RNPC3	100	76.938	Fukomys_damarensis
ENSSHAG00000011859	RNPC3	96	51.313	ENSFHEG00000020647	rnpc3	98	52.000	Fundulus_heteroclitus
ENSSHAG00000011859	RNPC3	96	53.254	ENSGMOG00000019213	rnpc3	96	54.092	Gadus_morhua
ENSSHAG00000011859	RNPC3	96	73.992	ENSGALG00000005162	RNPC3	89	73.589	Gallus_gallus
ENSSHAG00000011859	RNPC3	95	52.883	ENSGAFG00000017236	rnpc3	97	53.722	Gambusia_affinis
ENSSHAG00000011859	RNPC3	95	55.061	ENSGACG00000002048	rnpc3	97	55.030	Gasterosteus_aculeatus
ENSSHAG00000011859	RNPC3	96	72.490	ENSGAGG00000008438	RNPC3	95	72.691	Gopherus_agassizii
ENSSHAG00000011859	RNPC3	99	64.078	ENSGGOG00000026201	-	99	64.706	Gorilla_gorilla
ENSSHAG00000011859	RNPC3	79	67.500	ENSHBUG00000015966	rnpc3	83	67.500	Haplochromis_burtoni
ENSSHAG00000011859	RNPC3	99	76.550	ENSHGLG00000001708	RNPC3	99	76.550	Heterocephalus_glaber_female
ENSSHAG00000011859	RNPC3	99	76.550	ENSHGLG00100003005	RNPC3	99	76.550	Heterocephalus_glaber_male
ENSSHAG00000011859	RNPC3	97	54.076	ENSHCOG00000017135	rnpc3	98	54.309	Hippocampus_comes
ENSSHAG00000011859	RNPC3	94	56.315	ENSIPUG00000002916	rnpc3	96	56.289	Ictalurus_punctatus
ENSSHAG00000011859	RNPC3	99	77.713	ENSSTOG00000025020	RNPC3	99	77.713	Ictidomys_tridecemlineatus
ENSSHAG00000011859	RNPC3	99	75.728	ENSJJAG00000010203	Rnpc3	100	75.728	Jaculus_jaculus
ENSSHAG00000011859	RNPC3	96	55.110	ENSKMAG00000017358	rnpc3	98	53.226	Kryptolebias_marmoratus
ENSSHAG00000011859	RNPC3	95	55.332	ENSLBEG00000024901	rnpc3	95	55.221	Labrus_bergylta
ENSSHAG00000011859	RNPC3	95	62.626	ENSLACG00000005720	RNPC3	90	62.020	Latimeria_chalumnae
ENSSHAG00000011859	RNPC3	96	58.097	ENSLOCG00000007986	rnpc3	97	60.282	Lepisosteus_oculatus
ENSSHAG00000011859	RNPC3	99	78.101	ENSLAFG00000032342	RNPC3	100	78.101	Loxodonta_africana
ENSSHAG00000011859	RNPC3	99	78.835	ENSMFAG00000002004	RNPC3	99	78.835	Macaca_fascicularis
ENSSHAG00000011859	RNPC3	98	58.812	ENSMFAG00000002917	-	98	57.822	Macaca_fascicularis
ENSSHAG00000011859	RNPC3	81	72.642	ENSMMUG00000002098	-	89	72.642	Macaca_mulatta
ENSSHAG00000011859	RNPC3	99	78.641	ENSMMUG00000018039	RNPC3	99	78.641	Macaca_mulatta
ENSSHAG00000011859	RNPC3	99	74.369	ENSMNEG00000033950	RNPC3	99	74.369	Macaca_nemestrina
ENSSHAG00000011859	RNPC3	77	62.278	ENSMNEG00000029209	-	98	57.228	Macaca_nemestrina
ENSSHAG00000011859	RNPC3	99	79.029	ENSMLEG00000033628	RNPC3	99	79.029	Mandrillus_leucophaeus
ENSSHAG00000011859	RNPC3	98	59.804	ENSMLEG00000034644	-	98	59.375	Mandrillus_leucophaeus
ENSSHAG00000011859	RNPC3	95	51.587	ENSMAMG00000007496	rnpc3	96	47.810	Mastacembelus_armatus
ENSSHAG00000011859	RNPC3	95	54.743	ENSMZEG00005020233	rnpc3	97	54.743	Maylandia_zebra
ENSSHAG00000011859	RNPC3	88	72.807	ENSMGAG00000006381	RNPC3	100	73.026	Meleagris_gallopavo
ENSSHAG00000011859	RNPC3	96	78.543	ENSMAUG00000001358	Rnpc3	100	77.132	Mesocricetus_auratus
ENSSHAG00000011859	RNPC3	99	78.876	ENSMICG00000029591	RNPC3	99	78.876	Microcebus_murinus
ENSSHAG00000011859	RNPC3	96	78.745	ENSMOCG00000013423	Rnpc3	100	76.923	Microtus_ochrogaster
ENSSHAG00000011859	RNPC3	95	50.813	ENSMMOG00000005309	rnpc3	96	51.423	Mola_mola
ENSSHAG00000011859	RNPC3	100	96.117	ENSMODG00000002946	RNPC3	100	96.117	Monodelphis_domestica
ENSSHAG00000011859	RNPC3	95	53.069	ENSMALG00000015471	rnpc3	97	53.069	Monopterus_albus
ENSSHAG00000011859	RNPC3	99	76.969	MGP_CAROLIEiJ_G0025555	Rnpc3	100	76.969	Mus_caroli
ENSSHAG00000011859	RNPC3	99	77.670	ENSMUSG00000027981	Rnpc3	100	77.670	Mus_musculus
ENSSHAG00000011859	RNPC3	99	77.559	MGP_PahariEiJ_G0027001	Rnpc3	100	77.559	Mus_pahari
ENSSHAG00000011859	RNPC3	99	77.362	MGP_SPRETEiJ_G0026505	Rnpc3	100	77.362	Mus_spretus
ENSSHAG00000011859	RNPC3	99	78.337	ENSMPUG00000007349	RNPC3	99	78.337	Mustela_putorius_furo
ENSSHAG00000011859	RNPC3	99	76.550	ENSMLUG00000028743	RNPC3	99	76.550	Myotis_lucifugus
ENSSHAG00000011859	RNPC3	99	76.699	ENSNGAG00000010939	Rnpc3	100	76.699	Nannospalax_galili
ENSSHAG00000011859	RNPC3	95	55.466	ENSNBRG00000012196	rnpc3	94	55.466	Neolamprologus_brichardi
ENSSHAG00000011859	RNPC3	99	78.488	ENSNLEG00000012013	RNPC3	99	78.488	Nomascus_leucogenys
ENSSHAG00000011859	RNPC3	99	75.194	ENSODEG00000007612	RNPC3	99	75.194	Octodon_degus
ENSSHAG00000011859	RNPC3	95	56.301	ENSONIG00000004770	rnpc3	99	56.707	Oreochromis_niloticus
ENSSHAG00000011859	RNPC3	90	77.516	ENSOANG00000008220	RNPC3	100	76.660	Ornithorhynchus_anatinus
ENSSHAG00000011859	RNPC3	99	77.326	ENSOCUG00000004016	RNPC3	99	77.027	Oryctolagus_cuniculus
ENSSHAG00000011859	RNPC3	95	54.065	ENSORLG00000005694	rnpc3	97	54.065	Oryzias_latipes
ENSSHAG00000011859	RNPC3	95	54.141	ENSORLG00020005513	rnpc3	97	54.141	Oryzias_latipes_hni
ENSSHAG00000011859	RNPC3	95	54.065	ENSORLG00015002179	rnpc3	97	54.065	Oryzias_latipes_hsok
ENSSHAG00000011859	RNPC3	95	53.455	ENSOMEG00000017737	rnpc3	97	53.455	Oryzias_melastigma
ENSSHAG00000011859	RNPC3	99	78.252	ENSOGAG00000026182	RNPC3	99	78.252	Otolemur_garnettii
ENSSHAG00000011859	RNPC3	99	78.295	ENSOARG00000018719	RNPC3	99	78.295	Ovis_aries
ENSSHAG00000011859	RNPC3	99	78.530	ENSPPAG00000037459	RNPC3	99	78.530	Pan_paniscus
ENSSHAG00000011859	RNPC3	99	65.049	ENSPPAG00000030278	-	99	65.882	Pan_paniscus
ENSSHAG00000011859	RNPC3	99	79.110	ENSPPRG00000020246	RNPC3	99	79.110	Panthera_pardus
ENSSHAG00000011859	RNPC3	98	79.290	ENSPTIG00000009887	RNPC3	99	79.290	Panthera_tigris_altaica
ENSSHAG00000011859	RNPC3	98	64.822	ENSPTRG00000044227	-	98	64.822	Pan_troglodytes
ENSSHAG00000011859	RNPC3	99	78.682	ENSPTRG00000033902	RNPC3	99	78.682	Pan_troglodytes
ENSSHAG00000011859	RNPC3	98	62.919	ENSPANG00000029957	-	99	62.722	Papio_anubis
ENSSHAG00000011859	RNPC3	99	79.029	ENSPANG00000012137	RNPC3	99	79.029	Papio_anubis
ENSSHAG00000011859	RNPC3	95	53.024	ENSPKIG00000008828	rnpc3	96	54.032	Paramormyrops_kingsleyae
ENSSHAG00000011859	RNPC3	63	72.673	ENSPSIG00000007396	RNPC3	100	70.270	Pelodiscus_sinensis
ENSSHAG00000011859	RNPC3	96	50.696	ENSPMGG00000011742	rnpc3	98	51.292	Periophthalmus_magnuspinnatus
ENSSHAG00000011859	RNPC3	89	76.805	ENSPEMG00000020112	Rnpc3	100	77.434	Peromyscus_maniculatus_bairdii
ENSSHAG00000011859	RNPC3	50	47.191	ENSPMAG00000003778	rnpc3	97	46.705	Petromyzon_marinus
ENSSHAG00000011859	RNPC3	100	96.505	ENSPCIG00000004415	-	100	96.505	Phascolarctos_cinereus
ENSSHAG00000011859	RNPC3	95	53.521	ENSPFOG00000009895	rnpc3	97	53.521	Poecilia_formosa
ENSSHAG00000011859	RNPC3	95	53.521	ENSPLAG00000012023	rnpc3	97	53.521	Poecilia_latipinna
ENSSHAG00000011859	RNPC3	95	53.815	ENSPMEG00000003663	rnpc3	97	53.722	Poecilia_mexicana
ENSSHAG00000011859	RNPC3	95	53.414	ENSPREG00000010206	rnpc3	97	53.414	Poecilia_reticulata
ENSSHAG00000011859	RNPC3	84	74.827	ENSPPYG00000001102	RNPC3	99	74.827	Pongo_abelii
ENSSHAG00000011859	RNPC3	95	55.263	ENSPNYG00000020603	rnpc3	97	55.263	Pundamilia_nyererei
ENSSHAG00000011859	RNPC3	95	52.174	ENSPNAG00000000524	rnpc3	90	51.690	Pygocentrus_nattereri
ENSSHAG00000011859	RNPC3	99	76.163	ENSRNOG00000017310	Rnpc3	100	76.163	Rattus_norvegicus
ENSSHAG00000011859	RNPC3	99	73.837	ENSRBIG00000043897	RNPC3	99	73.837	Rhinopithecus_bieti
ENSSHAG00000011859	RNPC3	99	78.835	ENSRROG00000032334	RNPC3	99	78.835	Rhinopithecus_roxellana
ENSSHAG00000011859	RNPC3	99	77.519	ENSSBOG00000024473	RNPC3	99	77.519	Saimiri_boliviensis_boliviensis
ENSSHAG00000011859	RNPC3	96	58.621	ENSSFOG00015013055	rnpc3	99	58.418	Scleropages_formosus
ENSSHAG00000011859	RNPC3	95	53.892	ENSSMAG00000020346	rnpc3	97	53.892	Scophthalmus_maximus
ENSSHAG00000011859	RNPC3	95	55.336	ENSSDUG00000006600	rnpc3	97	55.336	Seriola_dumerili
ENSSHAG00000011859	RNPC3	95	55.534	ENSSLDG00000007979	rnpc3	97	55.534	Seriola_lalandi_dorsalis
ENSSHAG00000011859	RNPC3	95	68.154	ENSSPUG00000003872	-	92	68.966	Sphenodon_punctatus
ENSSHAG00000011859	RNPC3	94	74.227	ENSSPUG00000008539	-	92	75.464	Sphenodon_punctatus
ENSSHAG00000011859	RNPC3	95	49.803	ENSSPAG00000005633	rnpc3	97	54.545	Stegastes_partitus
ENSSHAG00000011859	RNPC3	99	78.101	ENSSSCG00000037254	RNPC3	99	77.519	Sus_scrofa
ENSSHAG00000011859	RNPC3	88	72.848	ENSTGUG00000004795	-	100	72.185	Taeniopygia_guttata
ENSSHAG00000011859	RNPC3	95	55.758	ENSTNIG00000018963	rnpc3	97	55.758	Tetraodon_nigroviridis
ENSSHAG00000011859	RNPC3	98	79.487	ENSUMAG00000007775	RNPC3	99	79.487	Ursus_maritimus
ENSSHAG00000011859	RNPC3	99	78.917	ENSVVUG00000000331	RNPC3	99	78.917	Vulpes_vulpes
ENSSHAG00000011859	RNPC3	95	52.381	ENSXETG00000025027	rnpc3	97	52.381	Xenopus_tropicalis
ENSSHAG00000011859	RNPC3	95	50.781	ENSXCOG00000005013	rnpc3	97	52.539	Xiphophorus_couchianus
ENSSHAG00000011859	RNPC3	95	52.590	ENSXMAG00000006495	rnpc3	97	53.200	Xiphophorus_maculatus