EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000012187 (Gene tree)
Gene ID: 100935273
Gene Symbol: CNOT1
Alias: AD-005|CDC39|KIAA1007|NOT1|NOT1H
Full Name: CCR4-NOT transcription complex subunit 1
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 83453 bases
Position: chrGL834777.1:985363-1068815
Accession: 100935273
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000014260	Not1	PF04054.15	3.6e-153	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000014379	CNOT1-201	8929	-	ENSSHAP00000014260	2378 (aa)	XP_012395907	G3WFQ5

Gene Model

Click here to download ENSSHAG00000012187's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000012187's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000012187	CNOT1	100	98.150	ENSG00000125107	CNOT1	100	100.000	Homo_sapiens
ENSSHAG00000012187	CNOT1	97	97.055	ENSAPOG00000005042	cnot1	100	97.055	Acanthochromis_polyacanthus
ENSSHAG00000012187	CNOT1	100	97.939	ENSAMEG00000017298	CNOT1	100	97.939	Ailuropoda_melanoleuca
ENSSHAG00000012187	CNOT1	90	89.935	ENSACIG00000016003	cnot1	100	89.935	Amphilophus_citrinellus
ENSSHAG00000012187	CNOT1	100	90.386	ENSAPEG00000022342	cnot1	100	90.344	Amphiprion_percula
ENSSHAG00000012187	CNOT1	97	97.195	ENSATEG00000012892	cnot1	100	97.195	Anabas_testudineus
ENSSHAG00000012187	CNOT1	100	97.565	ENSAPLG00000007162	CNOT1	100	97.565	Anas_platyrhynchos
ENSSHAG00000012187	CNOT1	91	96.339	ENSACAG00000001602	CNOT1	98	96.339	Anolis_carolinensis
ENSSHAG00000012187	CNOT1	100	95.270	ENSANAG00000038198	CNOT1	100	95.270	Aotus_nancymaae
ENSSHAG00000012187	CNOT1	97	97.195	ENSACLG00000014234	cnot1	100	97.195	Astatotilapia_calliptera
ENSSHAG00000012187	CNOT1	100	90.879	ENSAMXG00000013170	cnot1	100	91.429	Astyanax_mexicanus
ENSSHAG00000012187	CNOT1	100	98.150	ENSBTAG00000020782	CNOT1	100	98.204	Bos_taurus
ENSSHAG00000012187	CNOT1	81	40.625	WBGene00002845	let-711	92	54.430	Caenorhabditis_elegans
ENSSHAG00000012187	CNOT1	100	98.024	ENSCJAG00000011318	CNOT1	100	98.024	Callithrix_jacchus
ENSSHAG00000012187	CNOT1	100	97.818	ENSCAFG00000008426	CNOT1	100	97.818	Canis_familiaris
ENSSHAG00000012187	CNOT1	100	97.067	ENSCAFG00020010156	CNOT1	100	97.323	Canis_lupus_dingo
ENSSHAG00000012187	CNOT1	100	98.150	ENSCHIG00000010452	CNOT1	100	98.150	Capra_hircus
ENSSHAG00000012187	CNOT1	100	98.192	ENSTSYG00000006888	CNOT1	100	98.192	Carlito_syrichta
ENSSHAG00000012187	CNOT1	100	93.524	ENSCPOG00000013026	CNOT1	100	93.524	Cavia_porcellus
ENSSHAG00000012187	CNOT1	100	96.468	ENSCCAG00000026333	CNOT1	100	96.468	Cebus_capucinus
ENSSHAG00000012187	CNOT1	100	98.108	ENSCATG00000032625	CNOT1	100	98.108	Cercocebus_atys
ENSSHAG00000012187	CNOT1	100	98.066	ENSCLAG00000006289	CNOT1	100	98.066	Chinchilla_lanigera
ENSSHAG00000012187	CNOT1	100	98.108	ENSCSAG00000004731	CNOT1	100	98.108	Chlorocebus_sabaeus
ENSSHAG00000012187	CNOT1	81	98.940	ENSCHOG00000009712	CNOT1	83	98.940	Choloepus_hoffmanni
ENSSHAG00000012187	CNOT1	95	98.472	ENSCPBG00000026222	CNOT1	99	98.472	Chrysemys_picta_bellii
ENSSHAG00000012187	CNOT1	100	58.838	ENSCING00000009149	-	100	58.502	Ciona_intestinalis
ENSSHAG00000012187	CNOT1	89	62.728	ENSCSAVG00000002414	-	95	78.146	Ciona_savignyi
ENSSHAG00000012187	CNOT1	100	95.992	ENSCANG00000040534	CNOT1	100	95.992	Colobus_angolensis_palliatus
ENSSHAG00000012187	CNOT1	100	97.729	ENSCGRG00001016365	Cnot1	100	97.729	Cricetulus_griseus_chok1gshd
ENSSHAG00000012187	CNOT1	100	97.729	ENSCGRG00000001714	Cnot1	100	97.729	Cricetulus_griseus_crigri
ENSSHAG00000012187	CNOT1	97	96.494	ENSCVAG00000018930	cnot1	100	96.494	Cyprinodon_variegatus
ENSSHAG00000012187	CNOT1	100	89.782	ENSDARG00000004174	cnot1	100	90.159	Danio_rerio
ENSSHAG00000012187	CNOT1	100	95.586	ENSDNOG00000013250	CNOT1	100	95.586	Dasypus_novemcinctus
ENSSHAG00000012187	CNOT1	99	46.323	FBgn0085436	Not1	99	48.217	Drosophila_melanogaster
ENSSHAG00000012187	CNOT1	84	97.139	ENSETEG00000012806	CNOT1	84	97.139	Echinops_telfairi
ENSSHAG00000012187	CNOT1	81	76.923	ENSEBUG00000011534	cnot1	95	76.923	Eptatretus_burgeri
ENSSHAG00000012187	CNOT1	97	97.778	ENSEASG00005005819	CNOT1	100	98.204	Equus_asinus_asinus
ENSSHAG00000012187	CNOT1	100	98.192	ENSECAG00000009889	CNOT1	100	98.192	Equus_caballus
ENSSHAG00000012187	CNOT1	90	97.887	ENSEEUG00000006015	CNOT1	90	97.887	Erinaceus_europaeus
ENSSHAG00000012187	CNOT1	100	89.495	ENSELUG00000014085	cnot1	100	89.537	Esox_lucius
ENSSHAG00000012187	CNOT1	100	97.904	ENSFCAG00000025155	CNOT1	100	97.904	Felis_catus
ENSSHAG00000012187	CNOT1	100	97.645	ENSFALG00000007285	CNOT1	100	97.645	Ficedula_albicollis
ENSSHAG00000012187	CNOT1	100	97.981	ENSFDAG00000013399	CNOT1	100	97.981	Fukomys_damarensis
ENSSHAG00000012187	CNOT1	100	90.046	ENSFHEG00000020574	cnot1	100	90.088	Fundulus_heteroclitus
ENSSHAG00000012187	CNOT1	91	89.125	ENSGMOG00000012864	cnot1	100	89.496	Gadus_morhua
ENSSHAG00000012187	CNOT1	100	97.687	ENSGALG00000002301	CNOT1	100	97.687	Gallus_gallus
ENSSHAG00000012187	CNOT1	100	88.959	ENSGAFG00000015005	cnot1	100	89.001	Gambusia_affinis
ENSSHAG00000012187	CNOT1	91	89.963	ENSGACG00000002606	cnot1	100	95.510	Gasterosteus_aculeatus
ENSSHAG00000012187	CNOT1	100	97.730	ENSGAGG00000022646	CNOT1	100	97.730	Gopherus_agassizii
ENSSHAG00000012187	CNOT1	100	98.108	ENSGGOG00000009547	CNOT1	100	98.108	Gorilla_gorilla
ENSSHAG00000012187	CNOT1	97	97.195	ENSHBUG00000001729	cnot1	100	97.195	Haplochromis_burtoni
ENSSHAG00000012187	CNOT1	100	97.939	ENSHGLG00000014322	CNOT1	100	97.939	Heterocephalus_glaber_female
ENSSHAG00000012187	CNOT1	100	89.172	ENSHCOG00000006501	cnot1	100	89.311	Hippocampus_comes
ENSSHAG00000012187	CNOT1	100	88.768	ENSIPUG00000011915	cnot1	100	89.355	Ictalurus_punctatus
ENSSHAG00000012187	CNOT1	100	98.066	ENSSTOG00000005490	CNOT1	100	98.066	Ictidomys_tridecemlineatus
ENSSHAG00000012187	CNOT1	100	97.393	ENSJJAG00000000633	Cnot1	100	97.393	Jaculus_jaculus
ENSSHAG00000012187	CNOT1	100	90.213	ENSKMAG00000006149	cnot1	100	90.092	Kryptolebias_marmoratus
ENSSHAG00000012187	CNOT1	95	96.607	ENSLBEG00000004740	cnot1	100	96.607	Labrus_bergylta
ENSSHAG00000012187	CNOT1	100	95.122	ENSLACG00000010869	CNOT1	100	95.122	Latimeria_chalumnae
ENSSHAG00000012187	CNOT1	100	92.833	ENSLOCG00000006324	cnot1	100	92.875	Lepisosteus_oculatus
ENSSHAG00000012187	CNOT1	100	98.025	ENSLAFG00000000098	CNOT1	100	98.025	Loxodonta_africana
ENSSHAG00000012187	CNOT1	100	97.897	ENSMFAG00000035888	CNOT1	100	97.897	Macaca_fascicularis
ENSSHAG00000012187	CNOT1	100	98.066	ENSMMUG00000014625	CNOT1	100	98.066	Macaca_mulatta
ENSSHAG00000012187	CNOT1	100	95.346	ENSMNEG00000031820	CNOT1	100	98.087	Macaca_nemestrina
ENSSHAG00000012187	CNOT1	100	96.720	ENSMLEG00000040933	CNOT1	100	96.720	Mandrillus_leucophaeus
ENSSHAG00000012187	CNOT1	100	88.917	ENSMAMG00000016524	cnot1	100	89.043	Mastacembelus_armatus
ENSSHAG00000012187	CNOT1	97	97.195	ENSMZEG00005016210	cnot1	100	97.195	Maylandia_zebra
ENSSHAG00000012187	CNOT1	100	97.477	ENSMGAG00000001908	CNOT1	100	97.477	Meleagris_gallopavo
ENSSHAG00000012187	CNOT1	100	98.108	ENSMICG00000007071	CNOT1	100	98.108	Microcebus_murinus
ENSSHAG00000012187	CNOT1	100	97.771	ENSMOCG00000017969	Cnot1	100	97.771	Microtus_ochrogaster
ENSSHAG00000012187	CNOT1	97	93.829	ENSMMOG00000019134	cnot1	100	93.829	Mola_mola
ENSSHAG00000012187	CNOT1	100	99.412	ENSMODG00000014199	CNOT1	100	99.412	Monodelphis_domestica
ENSSHAG00000012187	CNOT1	100	90.172	ENSMALG00000008645	cnot1	100	90.214	Monopterus_albus
ENSSHAG00000012187	CNOT1	95	99.048	MGP_CAROLIEiJ_G0031430	Cnot1	92	99.048	Mus_caroli
ENSSHAG00000012187	CNOT1	100	97.813	ENSMUSG00000036550	Cnot1	100	97.813	Mus_musculus
ENSSHAG00000012187	CNOT1	100	97.771	MGP_PahariEiJ_G0023028	Cnot1	100	97.771	Mus_pahari
ENSSHAG00000012187	CNOT1	100	97.813	MGP_SPRETEiJ_G0032549	Cnot1	100	97.813	Mus_spretus
ENSSHAG00000012187	CNOT1	100	98.192	ENSMPUG00000004830	CNOT1	100	98.192	Mustela_putorius_furo
ENSSHAG00000012187	CNOT1	100	97.603	ENSMLUG00000003728	CNOT1	100	97.603	Myotis_lucifugus
ENSSHAG00000012187	CNOT1	100	98.066	ENSNGAG00000018628	Cnot1	100	98.066	Nannospalax_galili
ENSSHAG00000012187	CNOT1	94	97.195	ENSNBRG00000019358	cnot1	100	97.195	Neolamprologus_brichardi
ENSSHAG00000012187	CNOT1	100	98.066	ENSNLEG00000003566	CNOT1	100	98.066	Nomascus_leucogenys
ENSSHAG00000012187	CNOT1	87	100.000	ENSMEUG00000006145	CNOT1	88	100.000	Notamacropus_eugenii
ENSSHAG00000012187	CNOT1	86	100.000	ENSOPRG00000005604	CNOT1	86	100.000	Ochotona_princeps
ENSSHAG00000012187	CNOT1	100	97.939	ENSODEG00000016337	CNOT1	100	97.939	Octodon_degus
ENSSHAG00000012187	CNOT1	100	90.410	ENSONIG00000007358	cnot1	100	90.088	Oreochromis_niloticus
ENSSHAG00000012187	CNOT1	91	98.235	ENSOANG00000012109	CNOT1	100	98.544	Ornithorhynchus_anatinus
ENSSHAG00000012187	CNOT1	100	98.108	ENSOCUG00000006911	CNOT1	100	98.108	Oryctolagus_cuniculus
ENSSHAG00000012187	CNOT1	100	90.185	ENSORLG00000013734	cnot1	100	90.185	Oryzias_latipes
ENSSHAG00000012187	CNOT1	100	88.702	ENSORLG00020017012	cnot1	100	88.339	Oryzias_latipes_hni
ENSSHAG00000012187	CNOT1	100	88.618	ENSORLG00015007091	cnot1	100	88.255	Oryzias_latipes_hsok
ENSSHAG00000012187	CNOT1	100	87.998	ENSOMEG00000015124	cnot1	100	88.287	Oryzias_melastigma
ENSSHAG00000012187	CNOT1	100	98.108	ENSOGAG00000000543	CNOT1	100	98.108	Otolemur_garnettii
ENSSHAG00000012187	CNOT1	100	98.150	ENSOARG00000001567	CNOT1	100	98.150	Ovis_aries
ENSSHAG00000012187	CNOT1	100	98.150	ENSPPAG00000022013	CNOT1	100	98.150	Pan_paniscus
ENSSHAG00000012187	CNOT1	100	98.192	ENSPPRG00000004867	CNOT1	100	98.192	Panthera_pardus
ENSSHAG00000012187	CNOT1	100	98.192	ENSPTIG00000012589	CNOT1	100	98.192	Panthera_tigris_altaica
ENSSHAG00000012187	CNOT1	100	97.862	ENSPTRG00000008183	CNOT1	100	97.862	Pan_troglodytes
ENSSHAG00000012187	CNOT1	100	94.805	ENSPANG00000020901	CNOT1	100	94.889	Papio_anubis
ENSSHAG00000012187	CNOT1	97	93.399	ENSPKIG00000002914	CNOT1	99	93.399	Paramormyrops_kingsleyae
ENSSHAG00000012187	CNOT1	100	91.908	ENSPKIG00000023538	CNOT1	100	92.117	Paramormyrops_kingsleyae
ENSSHAG00000012187	CNOT1	100	97.603	ENSPSIG00000005499	CNOT1	100	97.603	Pelodiscus_sinensis
ENSSHAG00000012187	CNOT1	100	80.889	ENSPMAG00000009381	cnot1	100	80.789	Petromyzon_marinus
ENSSHAG00000012187	CNOT1	100	98.582	ENSPCIG00000007343	CNOT1	100	99.260	Phascolarctos_cinereus
ENSSHAG00000012187	CNOT1	99	89.556	ENSPFOG00000003497	cnot1	100	89.565	Poecilia_formosa
ENSSHAG00000012187	CNOT1	95	96.208	ENSPLAG00000014018	cnot1	100	96.208	Poecilia_latipinna
ENSSHAG00000012187	CNOT1	95	96.208	ENSPMEG00000005868	cnot1	100	96.208	Poecilia_mexicana
ENSSHAG00000012187	CNOT1	95	96.208	ENSPREG00000018793	cnot1	100	96.208	Poecilia_reticulata
ENSSHAG00000012187	CNOT1	100	98.192	ENSPPYG00000007410	CNOT1	100	98.192	Pongo_abelii
ENSSHAG00000012187	CNOT1	90	96.173	ENSPCAG00000003241	CNOT1	90	96.173	Procavia_capensis
ENSSHAG00000012187	CNOT1	100	97.778	ENSPCOG00000027139	CNOT1	100	97.778	Propithecus_coquereli
ENSSHAG00000012187	CNOT1	100	95.542	ENSPVAG00000004243	CNOT1	100	95.542	Pteropus_vampyrus
ENSSHAG00000012187	CNOT1	97	97.195	ENSPNYG00000012919	cnot1	100	97.195	Pundamilia_nyererei
ENSSHAG00000012187	CNOT1	100	89.702	ENSPNAG00000000246	cnot1	100	90.248	Pygocentrus_nattereri
ENSSHAG00000012187	CNOT1	100	97.729	ENSRNOG00000012271	Cnot1	100	97.729	Rattus_norvegicus
ENSSHAG00000012187	CNOT1	100	95.891	ENSRBIG00000044598	CNOT1	100	95.891	Rhinopithecus_bieti
ENSSHAG00000012187	CNOT1	100	98.108	ENSRROG00000000906	CNOT1	100	98.108	Rhinopithecus_roxellana
ENSSHAG00000012187	CNOT1	56	30.882	YCR093W	CDC39	68	34.815	Saccharomyces_cerevisiae
ENSSHAG00000012187	CNOT1	100	93.601	ENSSBOG00000029155	CNOT1	100	93.685	Saimiri_boliviensis_boliviensis
ENSSHAG00000012187	CNOT1	100	90.197	ENSSFOG00015017614	cnot1	100	89.983	Scleropages_formosus
ENSSHAG00000012187	CNOT1	97	97.195	ENSSMAG00000013844	cnot1	100	97.195	Scophthalmus_maximus
ENSSHAG00000012187	CNOT1	97	97.055	ENSSDUG00000021491	cnot1	100	97.055	Seriola_dumerili
ENSSHAG00000012187	CNOT1	97	97.055	ENSSLDG00000014816	cnot1	100	97.055	Seriola_lalandi_dorsalis
ENSSHAG00000012187	CNOT1	84	100.000	ENSSARG00000000762	CNOT1	88	100.000	Sorex_araneus
ENSSHAG00000012187	CNOT1	100	90.390	ENSSPAG00000018802	cnot1	100	90.264	Stegastes_partitus
ENSSHAG00000012187	CNOT1	100	98.024	ENSSSCG00000002799	CNOT1	100	98.204	Sus_scrofa
ENSSHAG00000012187	CNOT1	100	97.606	ENSTGUG00000005919	CNOT1	100	97.606	Taeniopygia_guttata
ENSSHAG00000012187	CNOT1	100	88.611	ENSTNIG00000018706	cnot1	100	88.569	Tetraodon_nigroviridis
ENSSHAG00000012187	CNOT1	80	97.702	ENSTBEG00000000720	CNOT1	80	97.702	Tupaia_belangeri
ENSSHAG00000012187	CNOT1	95	97.614	ENSTTRG00000008460	CNOT1	95	97.614	Tursiops_truncatus
ENSSHAG00000012187	CNOT1	100	98.192	ENSUAMG00000009251	CNOT1	100	98.192	Ursus_americanus
ENSSHAG00000012187	CNOT1	100	98.192	ENSUMAG00000021291	CNOT1	100	98.192	Ursus_maritimus
ENSSHAG00000012187	CNOT1	97	95.800	ENSVPAG00000008846	CNOT1	97	95.800	Vicugna_pacos
ENSSHAG00000012187	CNOT1	100	97.067	ENSVVUG00000024037	CNOT1	100	97.323	Vulpes_vulpes
ENSSHAG00000012187	CNOT1	100	90.646	ENSXETG00000015900	cnot1	100	90.520	Xenopus_tropicalis
ENSSHAG00000012187	CNOT1	100	89.127	ENSXCOG00000013552	cnot1	100	89.169	Xiphophorus_couchianus
ENSSHAG00000012187	CNOT1	100	89.169	ENSXMAG00000006031	cnot1	100	89.211	Xiphophorus_maculatus