EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSHAG00000012271 (Gene tree)
Gene ID
100933035
Gene Symbol
RBMS1
Alias
C2orf12|DKFZp564H0764|HCC-4|MSSP-1|MSSP-2|MSSP-3|SCR2|YC1
Full Name
RNA binding motif single stranded interacting protein 1
Gene Type
protein_coding
Species
Sarcophilus_harrisii
Status
putative
Strand
Minus strand
Length
247100 bases
Position
chrGL849627.1:998514-1245613
Accession
100933035
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSHAP00000014364RRM_1PF00076.223.5e-3312
ENSSHAP00000014364RRM_1PF00076.223.5e-3322
ENSSHAP00000014365RRM_1PF00076.221.1e-2412
ENSSHAP00000014365RRM_1PF00076.221.1e-2422
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSHAT00000014484RBMS1-2024478-ENSSHAP00000014365342 (aa)-G3WG10
ENSSHAT00000014483RBMS1-2015119-ENSSHAP00000014364403 (aa)XP_023355007G3WG09
Gene Model
Click here to download ENSSHAG00000012271's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000012271's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSHAG00000012271RBMS110071.676ENSSHAG00000002411RBMS39477.714
ENSSHAG00000012271RBMS15981.857ENSSHAG00000004939RBMS28787.324
ENSSHAG00000012271RBMS15034.419ENSSHAG00000013832-6436.872
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSHAG00000012271RBMS110093.842ENSG00000153250RBMS110096.850Homo_sapiens
ENSSHAG00000012271RBMS110074.783ENSAPOG00000024437-9578.215Acanthochromis_polyacanthus
ENSSHAG00000012271RBMS19960.831ENSAPOG00000013761rbms1a8965.407Acanthochromis_polyacanthus
ENSSHAG00000012271RBMS110087.861ENSAMEG00000012661RBMS110092.969Ailuropoda_melanoleuca
ENSSHAG00000012271RBMS110074.203ENSACIG00000021498RBMS19478.989Amphilophus_citrinellus
ENSSHAG00000012271RBMS18562.759ENSACIG00000000113rbms1a8166.667Amphilophus_citrinellus
ENSSHAG00000012271RBMS19960.831ENSAOCG00000010066rbms1a8965.507Amphiprion_ocellaris
ENSSHAG00000012271RBMS110074.783ENSAOCG00000014482-9579.474Amphiprion_ocellaris
ENSSHAG00000012271RBMS110074.493ENSAPEG00000018371-9579.211Amphiprion_percula
ENSSHAG00000012271RBMS19960.831ENSAPEG00000023563rbms1a8965.507Amphiprion_percula
ENSSHAG00000012271RBMS110073.913ENSATEG00000018573RBMS18979.261Anabas_testudineus
ENSSHAG00000012271RBMS19960.831ENSATEG00000015450rbms1a8965.407Anabas_testudineus
ENSSHAG00000012271RBMS19795.887ENSAPLG00000007282RBMS19895.887Anas_platyrhynchos
ENSSHAG00000012271RBMS110091.014ENSACAG00000011984RBMS18095.078Anolis_carolinensis
ENSSHAG00000012271RBMS19889.645ENSANAG00000024424RBMS110094.099Aotus_nancymaae
ENSSHAG00000012271RBMS19961.243ENSACLG00000021512rbms1a9065.507Astatotilapia_calliptera
ENSSHAG00000012271RBMS110071.884ENSACLG00000013048RBMS19675.521Astatotilapia_calliptera
ENSSHAG00000012271RBMS110075.490ENSAMXG00000009969RBMS110074.265Astyanax_mexicanus
ENSSHAG00000012271RBMS110068.406ENSAMXG00000002146rbms1a8873.864Astyanax_mexicanus
ENSSHAG00000012271RBMS110090.521ENSBTAG00000005180RBMS110090.521Bos_taurus
ENSSHAG00000012271RBMS110087.427ENSCJAG00000012871-9991.689Callithrix_jacchus
ENSSHAG00000012271RBMS110083.333ENSCJAG00000022465-9888.391Callithrix_jacchus
ENSSHAG00000012271RBMS110094.089ENSCJAG00000014861-10094.089Callithrix_jacchus
ENSSHAG00000012271RBMS110090.351ENSCAFG00000009922RBMS19593.490Canis_familiaris
ENSSHAG00000012271RBMS110094.789ENSCAFG00020006120RBMS110094.789Canis_lupus_dingo
ENSSHAG00000012271RBMS110094.789ENSCHIG00000023380RBMS110094.789Capra_hircus
ENSSHAG00000012271RBMS110094.089ENSTSYG00000005584RBMS110094.089Carlito_syrichta
ENSSHAG00000012271RBMS110094.293ENSCPOG00000012310RBMS110094.293Cavia_porcellus
ENSSHAG00000012271RBMS110094.089ENSCCAG00000033841RBMS110094.089Cebus_capucinus
ENSSHAG00000012271RBMS110094.089ENSCATG00000043032RBMS110094.089Cercocebus_atys
ENSSHAG00000012271RBMS110094.541ENSCLAG00000003031RBMS110094.541Chinchilla_lanigera
ENSSHAG00000012271RBMS110094.089ENSCSAG00000015687RBMS110094.089Chlorocebus_sabaeus
ENSSHAG00000012271RBMS15494.776ENSCHOG00000001579RBMS17394.776Choloepus_hoffmanni
ENSSHAG00000012271RBMS110096.059ENSCPBG00000026455RBMS110096.059Chrysemys_picta_bellii
ENSSHAG00000012271RBMS110094.089ENSCANG00000042152RBMS110094.089Colobus_angolensis_palliatus
ENSSHAG00000012271RBMS110094.293ENSCGRG00001022833Rbms110094.293Cricetulus_griseus_chok1gshd
ENSSHAG00000012271RBMS110094.293ENSCGRG00000008824Rbms110094.293Cricetulus_griseus_crigri
ENSSHAG00000012271RBMS110071.014ENSCSEG00000010652RBMS19475.852Cynoglossus_semilaevis
ENSSHAG00000012271RBMS19958.457ENSCSEG00000000889rbms1a9063.081Cynoglossus_semilaevis
ENSSHAG00000012271RBMS19960.534ENSCVAG00000014698rbms1a8965.116Cyprinodon_variegatus
ENSSHAG00000012271RBMS110072.754ENSCVAG00000002027RBMS19677.557Cyprinodon_variegatus
ENSSHAG00000012271RBMS110068.406ENSDARG00000074023rbms1a8773.864Danio_rerio
ENSSHAG00000012271RBMS110089.855ENSDNOG00000040691RBMS19590.761Dasypus_novemcinctus
ENSSHAG00000012271RBMS110094.293ENSDORG00000007103Rbms110094.293Dipodomys_ordii
ENSSHAG00000012271RBMS19481.627ENSETEG00000012135RBMS110081.627Echinops_telfairi
ENSSHAG00000012271RBMS110091.232ENSEASG00005023132RBMS110091.232Equus_asinus_asinus
ENSSHAG00000012271RBMS110094.828ENSECAG00000019894RBMS110094.828Equus_caballus
ENSSHAG00000012271RBMS17996.117ENSEEUG00000005628RBMS17996.117Erinaceus_europaeus
ENSSHAG00000012271RBMS19371.842ENSELUG00000019328RBMS19471.842Esox_lucius
ENSSHAG00000012271RBMS110061.850ENSELUG00000018923rbms1a9567.705Esox_lucius
ENSSHAG00000012271RBMS110093.842ENSFCAG00000012524RBMS110093.842Felis_catus
ENSSHAG00000012271RBMS110090.643ENSFALG00000004440RBMS19496.275Ficedula_albicollis
ENSSHAG00000012271RBMS110094.789ENSFDAG00000015692RBMS110094.789Fukomys_damarensis
ENSSHAG00000012271RBMS19960.831ENSFHEG00000005662rbms1a7981.529Fundulus_heteroclitus
ENSSHAG00000012271RBMS110071.884ENSFHEG00000000720RBMS18976.705Fundulus_heteroclitus
ENSSHAG00000012271RBMS19560.000ENSGMOG00000000525rbms1a9961.972Gadus_morhua
ENSSHAG00000012271RBMS110090.643ENSGALG00000011132RBMS19595.778Gallus_gallus
ENSSHAG00000012271RBMS110071.884ENSGAFG00000007708RBMS18876.705Gambusia_affinis
ENSSHAG00000012271RBMS19960.831ENSGAFG00000011633rbms1a9565.407Gambusia_affinis
ENSSHAG00000012271RBMS19960.534ENSGACG00000015174rbms1a9166.254Gasterosteus_aculeatus
ENSSHAG00000012271RBMS110072.174ENSGACG00000005671RBMS18977.557Gasterosteus_aculeatus
ENSSHAG00000012271RBMS110095.813ENSGAGG00000007866RBMS110095.813Gopherus_agassizii
ENSSHAG00000012271RBMS110086.377ENSGGOG00000043756-9590.885Gorilla_gorilla
ENSSHAG00000012271RBMS110090.058ENSGGOG00000001264RBMS19893.701Gorilla_gorilla
ENSSHAG00000012271RBMS19961.243ENSHBUG00000004802rbms1a9065.507Haplochromis_burtoni
ENSSHAG00000012271RBMS19373.750ENSHBUG00000004516RBMS19477.437Haplochromis_burtoni
ENSSHAG00000012271RBMS110094.045ENSHGLG00000010387RBMS110094.045Heterocephalus_glaber_female
ENSSHAG00000012271RBMS110089.474ENSHGLG00100014105RBMS110090.102Heterocephalus_glaber_male
ENSSHAG00000012271RBMS110070.435ENSHCOG00000016668RBMS19475.000Hippocampus_comes
ENSSHAG00000012271RBMS19959.644ENSHCOG00000020097rbms1a8964.244Hippocampus_comes
ENSSHAG00000012271RBMS110068.696ENSIPUG00000010131RBMS18874.148Ictalurus_punctatus
ENSSHAG00000012271RBMS110077.887ENSIPUG00000014677RBMS110075.921Ictalurus_punctatus
ENSSHAG00000012271RBMS110094.541ENSSTOG00000012501RBMS110094.541Ictidomys_tridecemlineatus
ENSSHAG00000012271RBMS110094.045ENSJJAG00000016543Rbms110094.045Jaculus_jaculus
ENSSHAG00000012271RBMS110074.493ENSKMAG00000013911RBMS19478.989Kryptolebias_marmoratus
ENSSHAG00000012271RBMS19959.467ENSKMAG00000011839-8964.058Kryptolebias_marmoratus
ENSSHAG00000012271RBMS19960.534ENSLBEG00000025962rbms1a8965.116Labrus_bergylta
ENSSHAG00000012271RBMS110073.333ENSLBEG00000005787RBMS19478.457Labrus_bergylta
ENSSHAG00000012271RBMS110080.058ENSLACG00000004324RBMS110079.038Latimeria_chalumnae
ENSSHAG00000012271RBMS110081.449ENSLOCG00000008622rbms1a9685.379Lepisosteus_oculatus
ENSSHAG00000012271RBMS110088.889ENSLAFG00000017217RBMS110094.195Loxodonta_africana
ENSSHAG00000012271RBMS110094.089ENSMFAG00000000274RBMS110094.089Macaca_fascicularis
ENSSHAG00000012271RBMS110094.089ENSMMUG00000016825RBMS110094.089Macaca_mulatta
ENSSHAG00000012271RBMS110094.089ENSMNEG00000039425RBMS110094.089Macaca_nemestrina
ENSSHAG00000012271RBMS110088.889ENSMLEG00000031517RBMS19993.717Mandrillus_leucophaeus
ENSSHAG00000012271RBMS19957.567ENSMAMG00000005018rbms1a8963.372Mastacembelus_armatus
ENSSHAG00000012271RBMS110072.464ENSMAMG00000003159-9278.348Mastacembelus_armatus
ENSSHAG00000012271RBMS19961.243ENSMZEG00005005661rbms1a9065.507Maylandia_zebra
ENSSHAG00000012271RBMS19373.125ENSMZEG00005007313RBMS19178.593Maylandia_zebra
ENSSHAG00000012271RBMS110089.855ENSMGAG00000011054RBMS110094.529Meleagris_gallopavo
ENSSHAG00000012271RBMS110094.541ENSMAUG00000008550Rbms110094.541Mesocricetus_auratus
ENSSHAG00000012271RBMS110093.842ENSMICG00000008325RBMS110093.842Microcebus_murinus
ENSSHAG00000012271RBMS110093.300ENSMOCG00000022617Rbms110093.300Microtus_ochrogaster
ENSSHAG00000012271RBMS110073.043ENSMMOG00000003707RBMS19478.133Mola_mola
ENSSHAG00000012271RBMS18564.261ENSMMOG00000018249rbms1a8169.463Mola_mola
ENSSHAG00000012271RBMS110099.752ENSMODG00000005250RBMS110099.752Monodelphis_domestica
ENSSHAG00000012271RBMS19574.312ENSMALG00000015715-9078.125Monopterus_albus
ENSSHAG00000012271RBMS19959.941ENSMALG00000014235rbms1a8964.535Monopterus_albus
ENSSHAG00000012271RBMS110092.804MGP_CAROLIEiJ_G0023586Rbms110092.804Mus_caroli
ENSSHAG00000012271RBMS110093.052ENSMUSG00000026970Rbms110093.052Mus_musculus
ENSSHAG00000012271RBMS110092.308MGP_PahariEiJ_G0025037Rbms110092.308Mus_pahari
ENSSHAG00000012271RBMS110093.052MGP_SPRETEiJ_G0024508Rbms110093.052Mus_spretus
ENSSHAG00000012271RBMS110091.408ENSMPUG00000000539RBMS110091.408Mustela_putorius_furo
ENSSHAG00000012271RBMS110089.535ENSMLUG00000008762RBMS19690.000Myotis_lucifugus
ENSSHAG00000012271RBMS110094.293ENSNGAG00000013636Rbms110094.293Nannospalax_galili
ENSSHAG00000012271RBMS18563.823ENSNBRG00000020217rbms1a8568.667Neolamprologus_brichardi
ENSSHAG00000012271RBMS110068.986ENSNBRG00000015151RBMS19474.148Neolamprologus_brichardi
ENSSHAG00000012271RBMS110093.842ENSNLEG00000001667RBMS110093.842Nomascus_leucogenys
ENSSHAG00000012271RBMS19880.769ENSMEUG00000000746RBMS110084.783Notamacropus_eugenii
ENSSHAG00000012271RBMS110086.946ENSOPRG00000012431RBMS110086.946Ochotona_princeps
ENSSHAG00000012271RBMS110094.541ENSODEG00000013934RBMS110094.541Octodon_degus
ENSSHAG00000012271RBMS110073.043ENSONIG00000008934RBMS19676.562Oreochromis_niloticus
ENSSHAG00000012271RBMS19961.538ENSONIG00000003329rbms1a8865.797Oreochromis_niloticus
ENSSHAG00000012271RBMS110091.304ENSOANG00000006166RBMS19697.113Ornithorhynchus_anatinus
ENSSHAG00000012271RBMS16356.250ENSOANG00000004477-10058.025Ornithorhynchus_anatinus
ENSSHAG00000012271RBMS110088.596ENSOCUG00000017365RBMS18993.931Oryctolagus_cuniculus
ENSSHAG00000012271RBMS19959.347ENSORLG00000003917rbms1a9063.953Oryzias_latipes
ENSSHAG00000012271RBMS19572.036ENSORLG00000016818RBMS18976.204Oryzias_latipes
ENSSHAG00000012271RBMS19959.050ENSORLG00020018663rbms1a9063.663Oryzias_latipes_hni
ENSSHAG00000012271RBMS19571.733ENSORLG00020022335RBMS18975.921Oryzias_latipes_hni
ENSSHAG00000012271RBMS19572.340ENSORLG00015018208RBMS18976.487Oryzias_latipes_hsok
ENSSHAG00000012271RBMS19959.347ENSORLG00015016556rbms1a9063.953Oryzias_latipes_hsok
ENSSHAG00000012271RBMS19573.476ENSOMEG00000002394RBMS19474.603Oryzias_melastigma
ENSSHAG00000012271RBMS110087.032ENSOGAG00000002900RBMS19492.938Otolemur_garnettii
ENSSHAG00000012271RBMS110094.789ENSOARG00000006870RBMS110094.789Ovis_aries
ENSSHAG00000012271RBMS110090.058ENSPPAG00000040083RBMS110093.455Pan_paniscus
ENSSHAG00000012271RBMS110084.638ENSPPAG00000036520-9989.894Pan_paniscus
ENSSHAG00000012271RBMS110093.842ENSPPRG00000005040RBMS110093.842Panthera_pardus
ENSSHAG00000012271RBMS110088.889ENSPTIG00000021240RBMS19494.842Panthera_tigris_altaica
ENSSHAG00000012271RBMS110093.842ENSPTRG00000052304RBMS110093.842Pan_troglodytes
ENSSHAG00000012271RBMS110085.217ENSPTRG00000039358-9990.130Pan_troglodytes
ENSSHAG00000012271RBMS110094.789ENSPANG00000001383RBMS110094.789Papio_anubis
ENSSHAG00000012271RBMS110079.707ENSPKIG00000001498rbms1a10077.506Paramormyrops_kingsleyae
ENSSHAG00000012271RBMS110075.000ENSPKIG00000012818rbms1a10076.543Paramormyrops_kingsleyae
ENSSHAG00000012271RBMS110097.022ENSPSIG00000010240RBMS110097.022Pelodiscus_sinensis
ENSSHAG00000012271RBMS19473.375ENSPMGG00000006310RBMS19570.040Periophthalmus_magnuspinnatus
ENSSHAG00000012271RBMS19956.805ENSPMGG00000004341rbms1a9061.449Periophthalmus_magnuspinnatus
ENSSHAG00000012271RBMS110094.045ENSPEMG00000009449Rbms110094.045Peromyscus_maniculatus_bairdii
ENSSHAG00000012271RBMS110099.752ENSPCIG00000018405RBMS110099.752Phascolarctos_cinereus
ENSSHAG00000012271RBMS19960.831ENSPFOG00000016116rbms1a8965.407Poecilia_formosa
ENSSHAG00000012271RBMS110071.594ENSPFOG00000017483RBMS19476.596Poecilia_formosa
ENSSHAG00000012271RBMS110071.884ENSPLAG00000000920RBMS18876.705Poecilia_latipinna
ENSSHAG00000012271RBMS19960.831ENSPLAG00000013864rbms1a8965.407Poecilia_latipinna
ENSSHAG00000012271RBMS19960.831ENSPMEG00000016185rbms1a8965.407Poecilia_mexicana
ENSSHAG00000012271RBMS110071.594ENSPMEG00000015838RBMS19476.596Poecilia_mexicana
ENSSHAG00000012271RBMS110072.174ENSPREG00000008146RBMS19476.862Poecilia_reticulata
ENSSHAG00000012271RBMS19960.831ENSPREG00000020161rbms1a8965.407Poecilia_reticulata
ENSSHAG00000012271RBMS110090.047ENSPPYG00000012879-10090.047Pongo_abelii
ENSSHAG00000012271RBMS110088.177ENSPCAG00000009673RBMS110088.177Procavia_capensis
ENSSHAG00000012271RBMS110093.842ENSPCOG00000027294RBMS110093.842Propithecus_coquereli
ENSSHAG00000012271RBMS110083.005ENSPVAG00000010429RBMS110083.005Pteropus_vampyrus
ENSSHAG00000012271RBMS110072.464ENSPNYG00000002643RBMS19676.042Pundamilia_nyererei
ENSSHAG00000012271RBMS110076.225ENSPNAG00000023479RBMS110075.000Pygocentrus_nattereri
ENSSHAG00000012271RBMS110068.116ENSPNAG00000010225rbms1a8873.580Pygocentrus_nattereri
ENSSHAG00000012271RBMS110093.052ENSRNOG00000008482Rbms110093.052Rattus_norvegicus
ENSSHAG00000012271RBMS110093.842ENSRBIG00000044262RBMS110093.842Rhinopithecus_bieti
ENSSHAG00000012271RBMS110090.521ENSRROG00000043108RBMS19993.979Rhinopithecus_roxellana
ENSSHAG00000012271RBMS110089.565ENSSBOG00000034705RBMS19992.969Saimiri_boliviensis_boliviensis
ENSSHAG00000012271RBMS110074.493ENSSFOG00015014493rbms1a9579.545Scleropages_formosus
ENSSHAG00000012271RBMS19981.235ENSSFOG00015022929rbms19980.247Scleropages_formosus
ENSSHAG00000012271RBMS110071.594ENSSMAG00000012152RBMS19075.798Scophthalmus_maximus
ENSSHAG00000012271RBMS19959.941ENSSMAG00000012722rbms1a9564.535Scophthalmus_maximus
ENSSHAG00000012271RBMS19960.831ENSSDUG00000020602rbms1a9565.407Seriola_dumerili
ENSSHAG00000012271RBMS110074.493ENSSDUG00000018803RBMS19479.521Seriola_dumerili
ENSSHAG00000012271RBMS110074.203ENSSLDG00000016556RBMS19479.255Seriola_lalandi_dorsalis
ENSSHAG00000012271RBMS19960.831ENSSLDG00000009495rbms1a8965.407Seriola_lalandi_dorsalis
ENSSHAG00000012271RBMS110065.025ENSSARG00000011085RBMS110065.025Sorex_araneus
ENSSHAG00000012271RBMS110089.855ENSSPUG00000017163RBMS110095.455Sphenodon_punctatus
ENSSHAG00000012271RBMS110075.652ENSSPAG00000000059RBMS19480.585Stegastes_partitus
ENSSHAG00000012271RBMS19960.534ENSSPAG00000005371rbms1a8965.116Stegastes_partitus
ENSSHAG00000012271RBMS110091.169ENSSSCG00000015888RBMS110091.169Sus_scrofa
ENSSHAG00000012271RBMS110096.278ENSTGUG00000006606RBMS110096.278Taeniopygia_guttata
ENSSHAG00000012271RBMS19959.347ENSTRUG00000017155rbms1a8963.953Takifugu_rubripes
ENSSHAG00000012271RBMS110071.884ENSTRUG00000005466-9674.611Takifugu_rubripes
ENSSHAG00000012271RBMS19460.991ENSTNIG00000009477rbms1a9962.654Tetraodon_nigroviridis
ENSSHAG00000012271RBMS110073.913ENSTNIG00000016496RBMS110076.923Tetraodon_nigroviridis
ENSSHAG00000012271RBMS19483.990ENSTBEG00000016156RBMS110083.990Tupaia_belangeri
ENSSHAG00000012271RBMS110088.406ENSTTRG00000011058RBMS110094.226Tursiops_truncatus
ENSSHAG00000012271RBMS110094.293ENSUAMG00000022331RBMS110094.293Ursus_americanus
ENSSHAG00000012271RBMS110089.766ENSUMAG00000008605RBMS19893.947Ursus_maritimus
ENSSHAG00000012271RBMS19492.388ENSVPAG00000002716RBMS110091.339Vicugna_pacos
ENSSHAG00000012271RBMS110091.169ENSVVUG00000018682RBMS110091.169Vulpes_vulpes
ENSSHAG00000012271RBMS110079.885ENSXETG00000016204rbms110084.334Xenopus_tropicalis
ENSSHAG00000012271RBMS18564.014ENSXCOG00000001659rbms1a8169.360Xiphophorus_couchianus
ENSSHAG00000012271RBMS110071.884ENSXCOG00000000211RBMS19576.705Xiphophorus_couchianus
ENSSHAG00000012271RBMS110071.884ENSXMAG00000011405RBMS19476.596Xiphophorus_maculatus
ENSSHAG00000012271RBMS19960.831ENSXMAG00000001802rbms1a8965.407Xiphophorus_maculatus

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