EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000012312 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: splicing factor%2C proline- and glutamine-rich
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 1044 bases
Position: chrGL856823.1:1008662-1009705
Accession: 100915871
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000014419	RRM_1	PF00076.22	2.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000014539	-	1044	XM_012548225	ENSSHAP00000014419	347 (aa)	XP_012403679	G3WG64

Gene Model

Click here to download ENSSHAG00000012312's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000012312's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000012312	-	100	87.466	ENSSHAG00000016107	-	79	87.738
ENSSHAG00000012312	-	80	58.741	ENSSHAG00000004696	PSPC1	73	51.282
ENSSHAG00000012312	-	100	55.714	ENSSHAG00000010195	NONO	71	58.286

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000012312	-	100	90.883	ENSG00000116560	SFPQ	97	87.963	Homo_sapiens
ENSSHAG00000012312	-	100	90.883	ENSAMEG00000000815	SFPQ	80	91.453	Ailuropoda_melanoleuca
ENSSHAG00000012312	-	100	67.429	ENSACIG00000000905	sfpq	57	67.529	Amphilophus_citrinellus
ENSSHAG00000012312	-	100	71.143	ENSATEG00000002981	sfpq	53	72.286	Anabas_testudineus
ENSSHAG00000012312	-	100	66.476	ENSANAG00000021268	-	100	69.054	Aotus_nancymaae
ENSSHAG00000012312	-	99	70.402	ENSANAG00000037798	-	99	70.402	Aotus_nancymaae
ENSSHAG00000012312	-	100	81.429	ENSANAG00000027438	-	57	81.429	Aotus_nancymaae
ENSSHAG00000012312	-	100	68.286	ENSACLG00000022332	sfpq	50	69.429	Astatotilapia_calliptera
ENSSHAG00000012312	-	100	67.429	ENSAMXG00000011538	sfpq	52	70.571	Astyanax_mexicanus
ENSSHAG00000012312	-	100	90.883	ENSBTAG00000016328	SFPQ	50	91.453	Bos_taurus
ENSSHAG00000012312	-	58	48.515	WBGene00017778	nono-1	57	37.640	Caenorhabditis_elegans
ENSSHAG00000012312	-	100	90.883	ENSCJAG00000001431	SFPQ	50	91.453	Callithrix_jacchus
ENSSHAG00000012312	-	100	86.325	ENSCAFG00000018271	-	53	86.325	Canis_familiaris
ENSSHAG00000012312	-	100	90.883	ENSCAFG00000003595	-	53	91.453	Canis_familiaris
ENSSHAG00000012312	-	100	84.571	ENSCAFG00000017608	-	50	87.719	Canis_familiaris
ENSSHAG00000012312	-	100	85.057	ENSCAFG00020010702	-	100	85.057	Canis_lupus_dingo
ENSSHAG00000012312	-	100	86.325	ENSCAFG00020004881	-	53	86.325	Canis_lupus_dingo
ENSSHAG00000012312	-	100	90.883	ENSTSYG00000037120	-	100	91.453	Carlito_syrichta
ENSSHAG00000012312	-	99	76.945	ENSTSYG00000035106	-	98	78.674	Carlito_syrichta
ENSSHAG00000012312	-	100	83.668	ENSCPOG00000015018	-	100	82.369	Cavia_porcellus
ENSSHAG00000012312	-	100	90.883	ENSCCAG00000029361	-	50	91.453	Cebus_capucinus
ENSSHAG00000012312	-	100	90.883	ENSCLAG00000009583	-	100	91.453	Chinchilla_lanigera
ENSSHAG00000012312	-	100	90.883	ENSCSAG00000001082	SFPQ	50	91.453	Chlorocebus_sabaeus
ENSSHAG00000012312	-	100	87.179	ENSCHOG00000009131	SFPQ	92	87.749	Choloepus_hoffmanni
ENSSHAG00000012312	-	100	88.169	ENSCPBG00000018674	SFPQ	55	88.169	Chrysemys_picta_bellii
ENSSHAG00000012312	-	100	90.883	ENSCANG00000028087	-	100	91.453	Colobus_angolensis_palliatus
ENSSHAG00000012312	-	100	90.883	ENSCGRG00001011698	Sfpq	50	91.453	Cricetulus_griseus_chok1gshd
ENSSHAG00000012312	-	100	90.883	ENSCGRG00000010128	Sfpq	78	91.453	Cricetulus_griseus_crigri
ENSSHAG00000012312	-	100	69.341	ENSCSEG00000007852	sfpq	53	70.487	Cynoglossus_semilaevis
ENSSHAG00000012312	-	100	66.571	ENSCVAG00000019538	sfpq	52	62.931	Cyprinodon_variegatus
ENSSHAG00000012312	-	100	66.000	ENSDARG00000011564	sfpq	100	82.609	Danio_rerio
ENSSHAG00000012312	-	100	90.883	ENSDNOG00000049454	SFPQ	50	91.453	Dasypus_novemcinctus
ENSSHAG00000012312	-	100	90.883	ENSDORG00000008109	Sfpq	50	91.453	Dipodomys_ordii
ENSSHAG00000012312	-	100	82.336	ENSETEG00000001095	SFPQ	50	82.906	Echinops_telfairi
ENSSHAG00000012312	-	100	90.883	ENSEASG00005012012	SFPQ	50	91.453	Equus_asinus_asinus
ENSSHAG00000012312	-	100	90.883	ENSECAG00000000642	SFPQ	50	91.453	Equus_caballus
ENSSHAG00000012312	-	100	68.571	ENSELUG00000023145	sfpq	53	69.714	Esox_lucius
ENSSHAG00000012312	-	100	90.883	ENSFCAG00000042862	SFPQ	50	91.453	Felis_catus
ENSSHAG00000012312	-	100	89.744	ENSFALG00000000731	SFPQ	100	89.744	Ficedula_albicollis
ENSSHAG00000012312	-	100	82.808	ENSFDAG00000017723	-	100	84.615	Fukomys_damarensis
ENSSHAG00000012312	-	100	70.655	ENSGMOG00000011950	SFPQ	60	71.225	Gadus_morhua
ENSSHAG00000012312	-	100	69.341	ENSGMOG00000011957	sfpq	53	69.914	Gadus_morhua
ENSSHAG00000012312	-	100	89.459	ENSGALG00000002514	SFPQ	54	89.459	Gallus_gallus
ENSSHAG00000012312	-	100	62.857	ENSGAFG00000014571	sfpq	50	65.033	Gambusia_affinis
ENSSHAG00000012312	-	100	68.768	ENSGACG00000002034	sfpq	55	70.201	Gasterosteus_aculeatus
ENSSHAG00000012312	-	100	90.883	ENSGGOG00000026354	SFPQ	100	91.453	Gorilla_gorilla
ENSSHAG00000012312	-	100	68.286	ENSHBUG00000016818	sfpq	50	69.429	Haplochromis_burtoni
ENSSHAG00000012312	-	100	90.113	ENSHGLG00000012001	SFPQ	51	90.678	Heterocephalus_glaber_female
ENSSHAG00000012312	-	100	90.883	ENSHGLG00100004136	-	100	91.453	Heterocephalus_glaber_male
ENSSHAG00000012312	-	100	70.000	ENSHCOG00000008612	sfpq	55	63.506	Hippocampus_comes
ENSSHAG00000012312	-	100	68.000	ENSIPUG00000013076	SFPQ	58	70.571	Ictalurus_punctatus
ENSSHAG00000012312	-	100	90.883	ENSSTOG00000014004	-	100	91.453	Ictidomys_tridecemlineatus
ENSSHAG00000012312	-	100	90.883	ENSJJAG00000015633	Sfpq	50	91.453	Jaculus_jaculus
ENSSHAG00000012312	-	100	73.143	ENSLACG00000014728	SFPQ	57	76.638	Latimeria_chalumnae
ENSSHAG00000012312	-	100	74.571	ENSLOCG00000001067	sfpq	56	76.266	Lepisosteus_oculatus
ENSSHAG00000012312	-	100	91.168	ENSLAFG00000015951	SFPQ	56	91.738	Loxodonta_africana
ENSSHAG00000012312	-	100	90.883	ENSMFAG00000000797	SFPQ	50	91.453	Macaca_fascicularis
ENSSHAG00000012312	-	100	90.883	ENSMMUG00000019154	SFPQ	50	91.453	Macaca_mulatta
ENSSHAG00000012312	-	100	90.883	ENSMNEG00000038895	SFPQ	50	91.453	Macaca_nemestrina
ENSSHAG00000012312	-	100	87.749	ENSMLEG00000010643	-	100	88.319	Mandrillus_leucophaeus
ENSSHAG00000012312	-	93	83.436	ENSMLEG00000035352	-	99	84.049	Mandrillus_leucophaeus
ENSSHAG00000012312	-	100	71.714	ENSMAMG00000007875	sfpq	53	72.857	Mastacembelus_armatus
ENSSHAG00000012312	-	100	68.286	ENSMZEG00005026091	sfpq	50	69.429	Maylandia_zebra
ENSSHAG00000012312	-	100	84.807	ENSMGAG00000004237	SFPQ	93	85.359	Meleagris_gallopavo
ENSSHAG00000012312	-	100	90.883	ENSMAUG00000006402	Sfpq	50	91.453	Mesocricetus_auratus
ENSSHAG00000012312	-	100	90.883	ENSMICG00000027265	SFPQ	50	91.453	Microcebus_murinus
ENSSHAG00000012312	-	100	86.040	ENSMOCG00000019075	Sfpq	72	86.610	Microtus_ochrogaster
ENSSHAG00000012312	-	100	69.341	ENSMMOG00000001074	sfpq	53	70.201	Mola_mola
ENSSHAG00000012312	-	100	92.857	ENSMODG00000017937	SFPQ	52	92.857	Monodelphis_domestica
ENSSHAG00000012312	-	100	69.540	ENSMALG00000010381	sfpq	52	70.690	Monopterus_albus
ENSSHAG00000012312	-	100	90.883	MGP_CAROLIEiJ_G0026487	Sfpq	50	91.453	Mus_caroli
ENSSHAG00000012312	-	100	90.883	ENSMUSG00000028820	Sfpq	50	91.453	Mus_musculus
ENSSHAG00000012312	-	100	90.883	MGP_PahariEiJ_G0028818	Sfpq	50	91.453	Mus_pahari
ENSSHAG00000012312	-	100	90.883	MGP_SPRETEiJ_G0027466	Sfpq	50	91.453	Mus_spretus
ENSSHAG00000012312	-	87	90.523	ENSMPUG00000014931	-	98	91.176	Mustela_putorius_furo
ENSSHAG00000012312	-	100	90.598	ENSMLUG00000027090	SFPQ	79	91.168	Myotis_lucifugus
ENSSHAG00000012312	-	100	90.598	ENSNGAG00000000888	Sfpq	50	91.168	Nannospalax_galili
ENSSHAG00000012312	-	100	68.857	ENSNBRG00000017479	sfpq	50	70.000	Neolamprologus_brichardi
ENSSHAG00000012312	-	100	90.883	ENSNLEG00000035521	-	100	91.453	Nomascus_leucogenys
ENSSHAG00000012312	-	100	93.410	ENSMEUG00000014082	SFPQ	50	93.410	Notamacropus_eugenii
ENSSHAG00000012312	-	100	90.883	ENSOPRG00000013696	SFPQ	50	91.453	Ochotona_princeps
ENSSHAG00000012312	-	96	76.786	ENSODEG00000005485	SFPQ	59	76.786	Octodon_degus
ENSSHAG00000012312	-	100	69.143	ENSONIG00000017737	sfpq	50	70.286	Oreochromis_niloticus
ENSSHAG00000012312	-	100	91.143	ENSOANG00000008789	-	100	91.714	Ornithorhynchus_anatinus
ENSSHAG00000012312	-	100	90.883	ENSOCUG00000001877	SFPQ	69	91.453	Oryctolagus_cuniculus
ENSSHAG00000012312	-	100	91.738	ENSOGAG00000027710	SFPQ	66	91.738	Otolemur_garnettii
ENSSHAG00000012312	-	100	90.883	ENSOARG00000019439	SFPQ	54	91.453	Ovis_aries
ENSSHAG00000012312	-	100	90.883	ENSPPAG00000030078	SFPQ	50	91.453	Pan_paniscus
ENSSHAG00000012312	-	100	90.625	ENSPPRG00000015478	-	100	91.193	Panthera_pardus
ENSSHAG00000012312	-	100	90.883	ENSPTIG00000007710	-	100	91.453	Panthera_tigris_altaica
ENSSHAG00000012312	-	100	90.883	ENSPANG00000005380	SFPQ	52	91.453	Papio_anubis
ENSSHAG00000012312	-	100	70.286	ENSPKIG00000023035	sfpq	59	75.354	Paramormyrops_kingsleyae
ENSSHAG00000012312	-	100	89.459	ENSPSIG00000011494	SFPQ	81	89.459	Pelodiscus_sinensis
ENSSHAG00000012312	-	100	63.689	ENSPMGG00000023883	sfpq	55	63.689	Periophthalmus_magnuspinnatus
ENSSHAG00000012312	-	100	90.883	ENSPEMG00000009794	Sfpq	72	91.453	Peromyscus_maniculatus_bairdii
ENSSHAG00000012312	-	69	73.750	ENSPMAG00000005583	sfpq	51	75.519	Petromyzon_marinus
ENSSHAG00000012312	-	100	93.696	ENSPCIG00000000923	SFPQ	50	93.696	Phascolarctos_cinereus
ENSSHAG00000012312	-	100	62.857	ENSPFOG00000003127	sfpq	57	64.589	Poecilia_formosa
ENSSHAG00000012312	-	100	90.883	ENSPPYG00000001560	SFPQ	50	91.453	Pongo_abelii
ENSSHAG00000012312	-	100	90.883	ENSPCOG00000027127	SFPQ	50	91.453	Propithecus_coquereli
ENSSHAG00000012312	-	100	88.889	ENSPVAG00000001865	SFPQ	50	89.459	Pteropus_vampyrus
ENSSHAG00000012312	-	100	67.330	ENSPNAG00000002128	sfpq	57	70.170	Pygocentrus_nattereri
ENSSHAG00000012312	-	100	90.883	ENSRNOG00000058461	Sfpq	50	91.453	Rattus_norvegicus
ENSSHAG00000012312	-	100	90.883	ENSRBIG00000035286	SFPQ	100	91.453	Rhinopithecus_bieti
ENSSHAG00000012312	-	100	90.883	ENSRROG00000040992	SFPQ	100	91.453	Rhinopithecus_roxellana
ENSSHAG00000012312	-	97	68.824	ENSSBOG00000033925	-	99	68.824	Saimiri_boliviensis_boliviensis
ENSSHAG00000012312	-	100	90.883	ENSSBOG00000024972	-	100	91.453	Saimiri_boliviensis_boliviensis
ENSSHAG00000012312	-	100	72.000	ENSSFOG00015009289	sfpq	63	75.429	Scleropages_formosus
ENSSHAG00000012312	-	100	70.201	ENSSMAG00000018201	sfpq	52	71.347	Scophthalmus_maximus
ENSSHAG00000012312	-	100	71.347	ENSSDUG00000008402	sfpq	52	74.571	Seriola_dumerili
ENSSHAG00000012312	-	100	71.347	ENSSLDG00000018917	sfpq	52	74.571	Seriola_lalandi_dorsalis
ENSSHAG00000012312	-	100	90.883	ENSSARG00000006409	SFPQ	95	91.453	Sorex_araneus
ENSSHAG00000012312	-	100	70.286	ENSSPAG00000016550	sfpq	50	72.000	Stegastes_partitus
ENSSHAG00000012312	-	100	90.883	ENSSSCG00000035690	SFPQ	50	91.453	Sus_scrofa
ENSSHAG00000012312	-	100	89.744	ENSTGUG00000001722	SFPQ	81	89.744	Taeniopygia_guttata
ENSSHAG00000012312	-	100	70.774	ENSTRUG00000003783	sfpq	50	72.779	Takifugu_rubripes
ENSSHAG00000012312	-	100	71.714	ENSTNIG00000011331	sfpq	57	72.857	Tetraodon_nigroviridis
ENSSHAG00000012312	-	100	87.749	ENSTTRG00000013930	SFPQ	50	87.749	Tursiops_truncatus
ENSSHAG00000012312	-	59	98.319	ENSUAMG00000026758	SFPQ	53	98.319	Ursus_americanus
ENSSHAG00000012312	-	100	88.319	ENSUMAG00000008056	-	100	88.889	Ursus_maritimus
ENSSHAG00000012312	-	100	82.051	ENSVVUG00000000874	-	100	82.621	Vulpes_vulpes
ENSSHAG00000012312	-	100	75.775	ENSXETG00000009682	sfpq	95	82.237	Xenopus_tropicalis