EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000012480 (Gene tree)
Gene ID: 100919529
Gene Symbol: -
Alias: -
Full Name: RNA binding motif protein 17
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 30498 bases
Position: chrGL861623.1:1039200-1069697
Accession: 100919529
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000014619	RRM_1	PF00076.22	6.2e-05	1	1
ENSSHAP00000014618	RRM_1	PF00076.22	6.4e-05	1	1
ENSSHAP00000014619	G-patch	PF01585.23	4.3e-13	1	1
ENSSHAP00000014618	G-patch	PF01585.23	4.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000014740	-	2161	-	ENSSHAP00000014618	406 (aa)	-	G3WGR3
ENSSHAT00000014741	-	2146	-	ENSSHAP00000014619	401 (aa)	XP_003771449	G3WGR4

Gene Model

Click here to download ENSSHAG00000012480's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000012480's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000012480	-	100	98.005	ENSG00000134453	RBM17	100	98.005	Homo_sapiens
ENSSHAG00000012480	-	99	82.426	ENSAPOG00000007101	rbm17	99	82.630	Acanthochromis_polyacanthus
ENSSHAG00000012480	-	100	98.005	ENSAMEG00000002107	RBM17	100	98.005	Ailuropoda_melanoleuca
ENSSHAG00000012480	-	100	79.167	ENSACIG00000006251	rbm17	100	79.167	Amphilophus_citrinellus
ENSSHAG00000012480	-	100	82.555	ENSAOCG00000014892	rbm17	100	82.555	Amphiprion_ocellaris
ENSSHAG00000012480	-	100	82.555	ENSAPEG00000022779	rbm17	100	82.555	Amphiprion_percula
ENSSHAG00000012480	-	100	79.245	ENSATEG00000004406	rbm17	100	79.245	Anabas_testudineus
ENSSHAG00000012480	-	100	96.020	ENSAPLG00000004190	RBM17	100	96.020	Anas_platyrhynchos
ENSSHAG00000012480	-	89	91.622	ENSACAG00000005418	RBM17	99	91.892	Anolis_carolinensis
ENSSHAG00000012480	-	100	83.582	ENSANAG00000019330	-	97	94.068	Aotus_nancymaae
ENSSHAG00000012480	-	100	98.005	ENSANAG00000030127	RBM17	100	98.005	Aotus_nancymaae
ENSSHAG00000012480	-	100	79.012	ENSACLG00000003928	rbm17	100	79.012	Astatotilapia_calliptera
ENSSHAG00000012480	-	100	77.647	ENSAMXG00000005853	rbm17	100	80.235	Astyanax_mexicanus
ENSSHAG00000012480	-	100	96.259	ENSBTAG00000011094	-	100	96.259	Bos_taurus
ENSSHAG00000012480	-	100	97.506	ENSBTAG00000021951	RBM17	100	97.506	Bos_taurus
ENSSHAG00000012480	-	74	33.882	WBGene00010233	F58B3.7	91	32.558	Caenorhabditis_elegans
ENSSHAG00000012480	-	100	98.005	ENSCJAG00000020573	RBM17	100	98.005	Callithrix_jacchus
ENSSHAG00000012480	-	100	98.005	ENSCAFG00000005206	RBM17	100	98.005	Canis_familiaris
ENSSHAG00000012480	-	100	93.516	ENSCAFG00020005420	RBM17	100	93.516	Canis_lupus_dingo
ENSSHAG00000012480	-	100	97.506	ENSCHIG00000023204	-	100	97.506	Capra_hircus
ENSSHAG00000012480	-	100	94.763	ENSCHIG00000019921	-	100	94.763	Capra_hircus
ENSSHAG00000012480	-	100	96.305	ENSTSYG00000001165	RBM17	100	96.305	Carlito_syrichta
ENSSHAG00000012480	-	96	75.065	ENSCAPG00000006275	RBM17	100	78.962	Cavia_aperea
ENSSHAG00000012480	-	100	93.154	ENSCPOG00000005679	RBM17	100	93.154	Cavia_porcellus
ENSSHAG00000012480	-	100	98.005	ENSCCAG00000018655	RBM17	100	98.005	Cebus_capucinus
ENSSHAG00000012480	-	100	98.005	ENSCATG00000041566	RBM17	100	98.005	Cercocebus_atys
ENSSHAG00000012480	-	100	97.291	ENSCLAG00000012195	RBM17	99	97.291	Chinchilla_lanigera
ENSSHAG00000012480	-	100	98.005	ENSCSAG00000013564	RBM17	100	98.005	Chlorocebus_sabaeus
ENSSHAG00000012480	-	92	78.919	ENSCHOG00000005131	RBM17	100	78.919	Choloepus_hoffmanni
ENSSHAG00000012480	-	100	96.517	ENSCPBG00000019836	RBM17	100	96.517	Chrysemys_picta_bellii
ENSSHAG00000012480	-	100	46.667	ENSCSAVG00000008782	-	100	45.107	Ciona_savignyi
ENSSHAG00000012480	-	100	97.756	ENSCANG00000030987	RBM17	100	97.756	Colobus_angolensis_palliatus
ENSSHAG00000012480	-	98	84.949	ENSCANG00000023715	-	100	84.949	Colobus_angolensis_palliatus
ENSSHAG00000012480	-	100	97.291	ENSCGRG00001013842	Rbm17	100	97.291	Cricetulus_griseus_chok1gshd
ENSSHAG00000012480	-	100	75.123	ENSCGRG00001009256	-	100	73.153	Cricetulus_griseus_chok1gshd
ENSSHAG00000012480	-	100	97.291	ENSCGRG00000006907	Rbm17	100	97.291	Cricetulus_griseus_crigri
ENSSHAG00000012480	-	100	79.557	ENSCSEG00000018164	rbm17	100	80.296	Cynoglossus_semilaevis
ENSSHAG00000012480	-	100	74.752	ENSCVAG00000002476	rbm17	100	76.098	Cyprinodon_variegatus
ENSSHAG00000012480	-	100	78.353	ENSDARG00000031346	rbm17	100	78.353	Danio_rerio
ENSSHAG00000012480	-	100	98.005	ENSDNOG00000035920	RBM17	100	98.005	Dasypus_novemcinctus
ENSSHAG00000012480	-	99	36.062	FBgn0086683	Spf45	99	36.318	Drosophila_melanogaster
ENSSHAG00000012480	-	100	74.314	ENSETEG00000006642	RBM17	100	74.314	Echinops_telfairi
ENSSHAG00000012480	-	69	62.673	ENSEBUG00000010253	rbm17	91	62.673	Eptatretus_burgeri
ENSSHAG00000012480	-	100	92.118	ENSEASG00005019205	-	100	92.118	Equus_asinus_asinus
ENSSHAG00000012480	-	92	94.324	ENSEASG00005009236	-	100	94.324	Equus_asinus_asinus
ENSSHAG00000012480	-	100	87.531	ENSECAG00000001379	-	100	87.531	Equus_caballus
ENSSHAG00000012480	-	100	81.546	ENSECAG00000008939	RBM17	100	84.289	Equus_caballus
ENSSHAG00000012480	-	86	79.070	ENSEEUG00000013077	RBM17	100	79.070	Erinaceus_europaeus
ENSSHAG00000012480	-	100	77.546	ENSELUG00000006440	rbm17	100	77.546	Esox_lucius
ENSSHAG00000012480	-	100	98.005	ENSFCAG00000031988	RBM17	100	98.005	Felis_catus
ENSSHAG00000012480	-	100	95.511	ENSFALG00000001790	RBM17	100	95.511	Ficedula_albicollis
ENSSHAG00000012480	-	100	97.291	ENSFDAG00000007470	RBM17	100	97.291	Fukomys_damarensis
ENSSHAG00000012480	-	100	78.774	ENSFHEG00000001266	rbm17	100	77.855	Fundulus_heteroclitus
ENSSHAG00000012480	-	99	75.059	ENSGMOG00000008438	rbm17	100	75.059	Gadus_morhua
ENSSHAG00000012480	-	100	96.010	ENSGALG00000006332	RBM17	100	96.010	Gallus_gallus
ENSSHAG00000012480	-	100	80.098	ENSGAFG00000019879	rbm17	100	80.835	Gambusia_affinis
ENSSHAG00000012480	-	99	81.281	ENSGACG00000019174	rbm17	99	81.281	Gasterosteus_aculeatus
ENSSHAG00000012480	-	100	96.517	ENSGAGG00000019906	RBM17	100	96.517	Gopherus_agassizii
ENSSHAG00000012480	-	100	83.538	ENSHBUG00000016624	rbm17	100	83.538	Haplochromis_burtoni
ENSSHAG00000012480	-	100	97.291	ENSHGLG00000011580	RBM17	100	97.291	Heterocephalus_glaber_female
ENSSHAG00000012480	-	100	97.291	ENSHGLG00100010460	RBM17	100	97.291	Heterocephalus_glaber_male
ENSSHAG00000012480	-	100	74.877	ENSHGLG00100010556	-	100	73.153	Heterocephalus_glaber_male
ENSSHAG00000012480	-	99	78.282	ENSHCOG00000010865	rbm17	100	78.282	Hippocampus_comes
ENSSHAG00000012480	-	100	78.689	ENSIPUG00000007699	Rbm17	100	78.689	Ictalurus_punctatus
ENSSHAG00000012480	-	100	97.537	ENSSTOG00000013591	RBM17	100	97.537	Ictidomys_tridecemlineatus
ENSSHAG00000012480	-	100	72.319	ENSJJAG00000000993	-	100	68.983	Jaculus_jaculus
ENSSHAG00000012480	-	100	97.291	ENSJJAG00000022886	Rbm17	100	97.291	Jaculus_jaculus
ENSSHAG00000012480	-	100	79.115	ENSKMAG00000021400	rbm17	100	79.953	Kryptolebias_marmoratus
ENSSHAG00000012480	-	100	81.818	ENSLBEG00000000881	rbm17	100	79.009	Labrus_bergylta
ENSSHAG00000012480	-	99	71.059	ENSLACG00000017297	RBM17	99	71.059	Latimeria_chalumnae
ENSSHAG00000012480	-	100	87.654	ENSLOCG00000015659	rbm17	100	87.654	Lepisosteus_oculatus
ENSSHAG00000012480	-	100	97.543	ENSLAFG00000011629	RBM17	100	97.543	Loxodonta_africana
ENSSHAG00000012480	-	100	98.005	ENSMFAG00000035521	RBM17	100	98.005	Macaca_fascicularis
ENSSHAG00000012480	-	100	98.005	ENSMMUG00000015152	RBM17	100	98.005	Macaca_mulatta
ENSSHAG00000012480	-	100	98.005	ENSMNEG00000017264	RBM17	100	98.005	Macaca_nemestrina
ENSSHAG00000012480	-	100	98.005	ENSMLEG00000029340	RBM17	100	98.005	Mandrillus_leucophaeus
ENSSHAG00000012480	-	100	78.302	ENSMAMG00000000387	rbm17	100	78.302	Mastacembelus_armatus
ENSSHAG00000012480	-	100	81.043	ENSMZEG00005015179	rbm17	100	81.043	Maylandia_zebra
ENSSHAG00000012480	-	100	94.608	ENSMGAG00000003981	RBM17	100	94.608	Meleagris_gallopavo
ENSSHAG00000012480	-	100	97.291	ENSMAUG00000019247	Rbm17	100	97.291	Mesocricetus_auratus
ENSSHAG00000012480	-	100	96.552	ENSMICG00000003976	-	100	96.552	Microcebus_murinus
ENSSHAG00000012480	-	100	89.242	ENSMICG00000041489	-	100	89.242	Microcebus_murinus
ENSSHAG00000012480	-	100	97.291	ENSMOCG00000011847	Rbm17	100	97.291	Microtus_ochrogaster
ENSSHAG00000012480	-	93	79.521	ENSMOCG00000014517	-	99	79.521	Microtus_ochrogaster
ENSSHAG00000012480	-	100	75.426	ENSMMOG00000010264	rbm17	100	74.209	Mola_mola
ENSSHAG00000012480	-	100	100.000	ENSMODG00000016648	RBM17	100	100.000	Monodelphis_domestica
ENSSHAG00000012480	-	100	78.353	ENSMALG00000010597	rbm17	100	78.353	Monopterus_albus
ENSSHAG00000012480	-	100	96.798	MGP_CAROLIEiJ_G0023173	Rbm17	100	96.798	Mus_caroli
ENSSHAG00000012480	-	100	96.798	ENSMUSG00000037197	Rbm17	100	96.798	Mus_musculus
ENSSHAG00000012480	-	100	96.552	MGP_PahariEiJ_G0019233	Rbm17	100	96.552	Mus_pahari
ENSSHAG00000012480	-	100	96.798	MGP_SPRETEiJ_G0024091	Rbm17	100	96.798	Mus_spretus
ENSSHAG00000012480	-	86	97.110	ENSMPUG00000016359	RBM17	97	97.110	Mustela_putorius_furo
ENSSHAG00000012480	-	100	92.519	ENSMLUG00000025709	-	100	91.022	Myotis_lucifugus
ENSSHAG00000012480	-	100	95.332	ENSMLUG00000002302	-	100	95.332	Myotis_lucifugus
ENSSHAG00000012480	-	100	97.291	ENSNGAG00000000741	Rbm17	100	97.291	Nannospalax_galili
ENSSHAG00000012480	-	100	68.080	ENSNGAG00000000663	-	100	67.662	Nannospalax_galili
ENSSHAG00000012480	-	100	77.778	ENSNBRG00000018148	rbm17	100	77.778	Neolamprologus_brichardi
ENSSHAG00000012480	-	100	98.005	ENSNLEG00000033350	RBM17	100	98.005	Nomascus_leucogenys
ENSSHAG00000012480	-	100	93.516	ENSMEUG00000011347	RBM17	100	93.516	Notamacropus_eugenii
ENSSHAG00000012480	-	100	84.539	ENSOPRG00000002993	RBM17	100	84.539	Ochotona_princeps
ENSSHAG00000012480	-	97	74.873	ENSODEG00000007286	-	99	74.873	Octodon_degus
ENSSHAG00000012480	-	100	96.560	ENSODEG00000004393	RBM17	100	96.560	Octodon_degus
ENSSHAG00000012480	-	100	83.538	ENSONIG00000011838	rbm17	100	83.538	Oreochromis_niloticus
ENSSHAG00000012480	-	100	98.015	ENSOANG00000015455	RBM17	100	98.015	Ornithorhynchus_anatinus
ENSSHAG00000012480	-	100	79.953	ENSORLG00000028798	rbm17	100	80.098	Oryzias_latipes
ENSSHAG00000012480	-	100	79.481	ENSORLG00020004593	rbm17	100	78.272	Oryzias_latipes_hni
ENSSHAG00000012480	-	100	83.047	ENSORLG00015000033	rbm17	100	83.047	Oryzias_latipes_hsok
ENSSHAG00000012480	-	100	79.717	ENSOMEG00000012060	rbm17	100	88.679	Oryzias_melastigma
ENSSHAG00000012480	-	100	96.798	ENSOGAG00000015687	RBM17	100	96.798	Otolemur_garnettii
ENSSHAG00000012480	-	100	97.506	ENSOARG00000012975	RBM17	100	97.506	Ovis_aries
ENSSHAG00000012480	-	100	98.005	ENSPPAG00000032347	RBM17	100	98.005	Pan_paniscus
ENSSHAG00000012480	-	100	98.005	ENSPPRG00000010706	RBM17	100	98.005	Panthera_pardus
ENSSHAG00000012480	-	100	98.005	ENSPTIG00000007596	RBM17	100	98.005	Panthera_tigris_altaica
ENSSHAG00000012480	-	100	98.005	ENSPTRG00000002265	RBM17	100	98.005	Pan_troglodytes
ENSSHAG00000012480	-	100	98.005	ENSPANG00000023425	RBM17	100	98.005	Papio_anubis
ENSSHAG00000012480	-	100	80.000	ENSPKIG00000025526	rbm17	100	79.812	Paramormyrops_kingsleyae
ENSSHAG00000012480	-	100	77.465	ENSPKIG00000005048	-	100	77.465	Paramormyrops_kingsleyae
ENSSHAG00000012480	-	100	94.815	ENSPSIG00000012332	RBM17	100	94.815	Pelodiscus_sinensis
ENSSHAG00000012480	-	100	77.284	ENSPMGG00000007980	rbm17	100	76.214	Periophthalmus_magnuspinnatus
ENSSHAG00000012480	-	100	97.291	ENSPEMG00000014320	Rbm17	100	97.291	Peromyscus_maniculatus_bairdii
ENSSHAG00000012480	-	100	99.256	ENSPCIG00000019260	-	100	99.256	Phascolarctos_cinereus
ENSSHAG00000012480	-	100	79.481	ENSPFOG00000013271	rbm17	100	79.481	Poecilia_formosa
ENSSHAG00000012480	-	100	79.717	ENSPLAG00000004455	rbm17	100	79.717	Poecilia_latipinna
ENSSHAG00000012480	-	100	82.064	ENSPMEG00000014864	rbm17	100	82.064	Poecilia_mexicana
ENSSHAG00000012480	-	100	78.066	ENSPREG00000015589	rbm17	100	78.774	Poecilia_reticulata
ENSSHAG00000012480	-	99	70.677	ENSPPYG00000019881	-	100	70.426	Pongo_abelii
ENSSHAG00000012480	-	100	98.005	ENSPPYG00000002067	RBM17	100	98.005	Pongo_abelii
ENSSHAG00000012480	-	81	69.659	ENSPPYG00000019042	-	100	69.350	Pongo_abelii
ENSSHAG00000012480	-	100	90.524	ENSPCAG00000016879	RBM17	100	90.524	Procavia_capensis
ENSSHAG00000012480	-	100	97.506	ENSPCOG00000027881	RBM17	100	97.506	Propithecus_coquereli
ENSSHAG00000012480	-	100	87.032	ENSPVAG00000015499	RBM17	100	85.536	Pteropus_vampyrus
ENSSHAG00000012480	-	100	76.368	ENSPNYG00000015274	rbm17	100	76.368	Pundamilia_nyererei
ENSSHAG00000012480	-	100	80.000	ENSPNAG00000030046	rbm17	100	80.000	Pygocentrus_nattereri
ENSSHAG00000012480	-	100	97.291	ENSRNOG00000018767	Rbm17	100	97.291	Rattus_norvegicus
ENSSHAG00000012480	-	100	98.005	ENSRBIG00000043727	RBM17	100	98.005	Rhinopithecus_bieti
ENSSHAG00000012480	-	100	98.005	ENSRROG00000044142	RBM17	100	98.005	Rhinopithecus_roxellana
ENSSHAG00000012480	-	100	87.313	ENSSBOG00000023653	-	100	87.313	Saimiri_boliviensis_boliviensis
ENSSHAG00000012480	-	100	97.756	ENSSBOG00000031661	-	100	97.756	Saimiri_boliviensis_boliviensis
ENSSHAG00000012480	-	100	82.555	ENSSFOG00015009892	rbm17	100	82.555	Scleropages_formosus
ENSSHAG00000012480	-	100	78.465	ENSSMAG00000012368	rbm17	100	77.612	Scophthalmus_maximus
ENSSHAG00000012480	-	100	81.840	ENSSDUG00000015015	rbm17	100	81.840	Seriola_dumerili
ENSSHAG00000012480	-	100	81.840	ENSSLDG00000014486	rbm17	100	81.840	Seriola_lalandi_dorsalis
ENSSHAG00000012480	-	59	78.814	ENSSARG00000001792	-	100	78.814	Sorex_araneus
ENSSHAG00000012480	-	99	96.010	ENSSPUG00000001036	RBM17	99	96.010	Sphenodon_punctatus
ENSSHAG00000012480	-	100	82.801	ENSSPAG00000002338	rbm17	100	82.801	Stegastes_partitus
ENSSHAG00000012480	-	100	97.257	ENSSSCG00000011134	RBM17	100	97.257	Sus_scrofa
ENSSHAG00000012480	-	100	95.074	ENSTGUG00000002013	RBM17	100	95.074	Taeniopygia_guttata
ENSSHAG00000012480	-	100	81.773	ENSTRUG00000010698	rbm17	100	81.773	Takifugu_rubripes
ENSSHAG00000012480	-	100	81.663	ENSTNIG00000006892	rbm17	100	81.663	Tetraodon_nigroviridis
ENSSHAG00000012480	-	100	77.057	ENSTBEG00000014686	RBM17	100	77.057	Tupaia_belangeri
ENSSHAG00000012480	-	90	97.222	ENSTTRG00000001344	RBM17	100	97.222	Tursiops_truncatus
ENSSHAG00000012480	-	100	93.516	ENSUAMG00000009499	RBM17	100	93.516	Ursus_americanus
ENSSHAG00000012480	-	100	97.756	ENSUMAG00000012237	RBM17	100	97.756	Ursus_maritimus
ENSSHAG00000012480	-	100	83.042	ENSVPAG00000005497	RBM17	100	83.042	Vicugna_pacos
ENSSHAG00000012480	-	100	93.516	ENSVVUG00000006780	RBM17	97	97.110	Vulpes_vulpes
ENSSHAG00000012480	-	99	86.816	ENSXETG00000018123	rbm17	100	86.816	Xenopus_tropicalis
ENSSHAG00000012480	-	100	80.098	ENSXMAG00000008674	rbm17	100	80.835	Xiphophorus_maculatus