EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000012513 (Gene tree)
Gene ID: 100913550
Gene Symbol: -
Alias: -
Full Name: chromodomain helicase DNA binding protein 2
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 123974 bases
Position: chrGL834475.1:1045573-1169546
Accession: 100913550
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000014660	ResIII	PF04851.15	2.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000014784	-	5584	-	ENSSHAP00000014660	1836 (aa)	XP_012398014	G3WGV5

Gene Model

Click here to download ENSSHAG00000012513's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000012513's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000012513	-	100	92.709	ENSG00000173575	CHD2	100	97.143	Homo_sapiens
ENSSHAG00000012513	-	96	73.475	ENSAPOG00000008913	chd2	100	72.932	Acanthochromis_polyacanthus
ENSSHAG00000012513	-	63	93.540	ENSAMEG00000010805	-	100	93.196	Ailuropoda_melanoleuca
ENSSHAG00000012513	-	96	71.132	ENSAOCG00000016332	chd2	100	70.414	Amphiprion_ocellaris
ENSSHAG00000012513	-	96	73.543	ENSAPEG00000016676	chd2	100	72.727	Amphiprion_percula
ENSSHAG00000012513	-	100	72.517	ENSATEG00000005246	chd2	100	72.732	Anabas_testudineus
ENSSHAG00000012513	-	100	90.973	ENSAPLG00000011141	-	100	90.973	Anas_platyrhynchos
ENSSHAG00000012513	-	98	82.269	ENSACAG00000000088	-	99	81.922	Anolis_carolinensis
ENSSHAG00000012513	-	100	92.923	ENSANAG00000024017	-	100	92.705	Aotus_nancymaae
ENSSHAG00000012513	-	63	78.762	ENSACLG00000021370	chd2	99	72.249	Astatotilapia_calliptera
ENSSHAG00000012513	-	100	92.705	ENSCJAG00000020444	-	100	92.488	Callithrix_jacchus
ENSSHAG00000012513	-	99	92.790	ENSCAFG00000010998	CHD2	100	93.156	Canis_familiaris
ENSSHAG00000012513	-	99	90.442	ENSCHIG00000022261	-	99	90.824	Capra_hircus
ENSSHAG00000012513	-	100	93.032	ENSTSYG00000003272	-	100	92.814	Carlito_syrichta
ENSSHAG00000012513	-	94	91.967	ENSCPOG00000005800	-	100	91.721	Cavia_porcellus
ENSSHAG00000012513	-	100	92.869	ENSCCAG00000035304	-	100	92.651	Cebus_capucinus
ENSSHAG00000012513	-	100	92.709	ENSCATG00000031069	-	100	92.492	Cercocebus_atys
ENSSHAG00000012513	-	100	92.002	ENSCLAG00000016269	-	100	91.839	Chinchilla_lanigera
ENSSHAG00000012513	-	100	92.764	ENSCSAG00000017007	-	100	92.546	Chlorocebus_sabaeus
ENSSHAG00000012513	-	78	93.636	ENSCHOG00000000608	-	82	93.636	Choloepus_hoffmanni
ENSSHAG00000012513	-	81	89.235	ENSCPBG00000018049	-	97	93.269	Chrysemys_picta_bellii
ENSSHAG00000012513	-	74	54.354	ENSCSAVG00000007580	-	92	59.746	Ciona_savignyi
ENSSHAG00000012513	-	100	92.655	ENSCANG00000038126	-	100	92.437	Colobus_angolensis_palliatus
ENSSHAG00000012513	-	100	91.726	ENSCGRG00001006649	Chd2	100	91.562	Cricetulus_griseus_chok1gshd
ENSSHAG00000012513	-	100	91.726	ENSCGRG00000018154	Chd2	100	91.562	Cricetulus_griseus_crigri
ENSSHAG00000012513	-	98	63.681	ENSCSEG00000003646	chd2	93	66.687	Cynoglossus_semilaevis
ENSSHAG00000012513	-	100	65.486	ENSCVAG00000002427	chd2	100	72.000	Cyprinodon_variegatus
ENSSHAG00000012513	-	100	70.683	ENSDARG00000060687	chd2	100	73.460	Danio_rerio
ENSSHAG00000012513	-	99	92.437	ENSDNOG00000009796	-	100	92.111	Dasypus_novemcinctus
ENSSHAG00000012513	-	57	71.063	ENSEBUG00000014994	chd2	83	73.404	Eptatretus_burgeri
ENSSHAG00000012513	-	99	93.124	ENSEASG00005015526	-	100	92.338	Equus_asinus_asinus
ENSSHAG00000012513	-	95	72.927	ENSELUG00000017981	chd2	94	85.185	Esox_lucius
ENSSHAG00000012513	-	100	91.567	ENSFALG00000010369	-	100	91.404	Ficedula_albicollis
ENSSHAG00000012513	-	100	91.948	ENSFDAG00000020651	-	100	91.730	Fukomys_damarensis
ENSSHAG00000012513	-	90	71.123	ENSFHEG00000002119	chd2	100	68.864	Fundulus_heteroclitus
ENSSHAG00000012513	-	94	69.350	ENSGMOG00000002890	chd2	99	70.920	Gadus_morhua
ENSSHAG00000012513	-	100	90.983	ENSGALG00000006949	CHD2	100	90.983	Gallus_gallus
ENSSHAG00000012513	-	96	69.854	ENSGAFG00000001905	chd2	97	72.662	Gambusia_affinis
ENSSHAG00000012513	-	91	71.556	ENSGACG00000013246	chd2	99	71.323	Gasterosteus_aculeatus
ENSSHAG00000012513	-	79	92.132	ENSGAGG00000013176	-	95	100.000	Gopherus_agassizii
ENSSHAG00000012513	-	100	91.513	ENSGGOG00000015677	CHD2	100	91.077	Gorilla_gorilla
ENSSHAG00000012513	-	100	73.083	ENSHBUG00000017947	chd2	100	72.903	Haplochromis_burtoni
ENSSHAG00000012513	-	100	91.839	ENSHGLG00000004435	CHD2	100	91.676	Heterocephalus_glaber_female
ENSSHAG00000012513	-	100	91.295	ENSHGLG00100016376	-	100	91.186	Heterocephalus_glaber_male
ENSSHAG00000012513	-	96	67.194	ENSHCOG00000008855	chd2	97	67.592	Hippocampus_comes
ENSSHAG00000012513	-	72	75.075	ENSIPUG00000000488	chd2	100	69.534	Ictalurus_punctatus
ENSSHAG00000012513	-	100	92.764	ENSSTOG00000001270	-	100	92.546	Ictidomys_tridecemlineatus
ENSSHAG00000012513	-	100	91.671	ENSJJAG00000000213	Chd2	100	91.453	Jaculus_jaculus
ENSSHAG00000012513	-	83	73.520	ENSKMAG00000015849	chd2	99	74.301	Kryptolebias_marmoratus
ENSSHAG00000012513	-	76	93.012	ENSLAFG00000016885	-	100	92.723	Loxodonta_africana
ENSSHAG00000012513	-	100	92.764	ENSMFAG00000033343	-	100	92.546	Macaca_fascicularis
ENSSHAG00000012513	-	100	92.764	ENSMMUG00000011782	-	100	92.546	Macaca_mulatta
ENSSHAG00000012513	-	100	92.500	ENSMNEG00000036875	-	100	92.283	Macaca_nemestrina
ENSSHAG00000012513	-	100	92.764	ENSMLEG00000035026	-	100	92.546	Mandrillus_leucophaeus
ENSSHAG00000012513	-	100	72.499	ENSMAMG00000009082	chd2	100	72.425	Mastacembelus_armatus
ENSSHAG00000012513	-	63	78.762	ENSMZEG00005021333	chd2	99	72.249	Maylandia_zebra
ENSSHAG00000012513	-	99	90.884	ENSMGAG00000008966	-	99	90.844	Meleagris_gallopavo
ENSSHAG00000012513	-	100	91.290	ENSMICG00000000332	-	99	91.980	Microcebus_murinus
ENSSHAG00000012513	-	100	91.839	ENSMOCG00000015124	Chd2	100	91.676	Microtus_ochrogaster
ENSSHAG00000012513	-	100	98.802	ENSMODG00000013158	-	100	98.802	Monodelphis_domestica
ENSSHAG00000012513	-	96	71.982	ENSMALG00000007755	chd2	98	71.897	Monopterus_albus
ENSSHAG00000012513	-	100	91.453	MGP_CAROLIEiJ_G0029860	Chd2	100	91.236	Mus_caroli
ENSSHAG00000012513	-	100	91.127	ENSMUSG00000078671	Chd2	100	90.909	Mus_musculus
ENSSHAG00000012513	-	100	91.349	MGP_PahariEiJ_G0013082	Chd2	100	91.186	Mus_pahari
ENSSHAG00000012513	-	100	91.236	MGP_SPRETEiJ_G0030962	Chd2	100	91.018	Mus_spretus
ENSSHAG00000012513	-	100	92.923	ENSMPUG00000017577	-	100	92.705	Mustela_putorius_furo
ENSSHAG00000012513	-	100	90.659	ENSMLUG00000009292	-	100	90.497	Myotis_lucifugus
ENSSHAG00000012513	-	100	92.324	ENSNGAG00000010792	Chd2	100	92.107	Nannospalax_galili
ENSSHAG00000012513	-	96	73.008	ENSNBRG00000020591	chd2	100	72.319	Neolamprologus_brichardi
ENSSHAG00000012513	-	100	90.424	ENSNLEG00000012349	-	100	90.207	Nomascus_leucogenys
ENSSHAG00000012513	-	71	98.881	ENSMEUG00000001522	-	77	98.881	Notamacropus_eugenii
ENSSHAG00000012513	-	100	91.023	ENSODEG00000016028	-	100	90.860	Octodon_degus
ENSSHAG00000012513	-	100	73.058	ENSONIG00000015136	chd2	100	72.957	Oreochromis_niloticus
ENSSHAG00000012513	-	87	85.378	ENSOANG00000004385	-	100	85.378	Ornithorhynchus_anatinus
ENSSHAG00000012513	-	100	82.845	ENSOCUG00000001628	-	99	92.575	Oryctolagus_cuniculus
ENSSHAG00000012513	-	95	72.882	ENSORLG00000008403	chd2	99	72.168	Oryzias_latipes
ENSSHAG00000012513	-	95	73.250	ENSORLG00020004138	chd2	99	72.519	Oryzias_latipes_hni
ENSSHAG00000012513	-	100	65.770	ENSOMEG00000005831	chd2	100	65.697	Oryzias_melastigma
ENSSHAG00000012513	-	100	90.588	ENSOGAG00000010399	-	100	90.316	Otolemur_garnettii
ENSSHAG00000012513	-	99	92.151	ENSOARG00000010343	-	100	90.696	Ovis_aries
ENSSHAG00000012513	-	100	91.744	ENSPPAG00000030381	-	100	91.526	Pan_paniscus
ENSSHAG00000012513	-	100	92.764	ENSPTRG00000007478	CHD2	100	92.546	Pan_troglodytes
ENSSHAG00000012513	-	100	89.880	ENSPANG00000033355	-	100	89.663	Papio_anubis
ENSSHAG00000012513	-	96	73.972	ENSPKIG00000000495	chd2	100	72.977	Paramormyrops_kingsleyae
ENSSHAG00000012513	-	84	70.083	ENSPMGG00000009941	chd2	99	71.982	Periophthalmus_magnuspinnatus
ENSSHAG00000012513	-	100	91.780	ENSPEMG00000019507	Chd2	100	91.617	Peromyscus_maniculatus_bairdii
ENSSHAG00000012513	-	92	99.172	ENSPCIG00000009417	-	99	99.172	Phascolarctos_cinereus
ENSSHAG00000012513	-	100	72.240	ENSPFOG00000007050	chd2	100	72.595	Poecilia_formosa
ENSSHAG00000012513	-	100	72.454	ENSPLAG00000005067	chd2	100	72.810	Poecilia_latipinna
ENSSHAG00000012513	-	100	71.972	ENSPMEG00000019628	chd2	100	72.649	Poecilia_mexicana
ENSSHAG00000012513	-	100	91.458	ENSPPYG00000006799	-	100	91.240	Pongo_abelii
ENSSHAG00000012513	-	100	92.927	ENSPCOG00000028084	-	100	92.764	Propithecus_coquereli
ENSSHAG00000012513	-	63	78.830	ENSPNYG00000010273	chd2	99	72.352	Pundamilia_nyererei
ENSSHAG00000012513	-	95	71.135	ENSPNAG00000016719	chd2	99	69.989	Pygocentrus_nattereri
ENSSHAG00000012513	-	100	91.127	ENSRNOG00000012716	Chd2	100	90.909	Rattus_norvegicus
ENSSHAG00000012513	-	100	90.701	ENSRBIG00000036875	-	100	90.484	Rhinopithecus_bieti
ENSSHAG00000012513	-	100	92.655	ENSRROG00000041087	-	100	92.437	Rhinopithecus_roxellana
ENSSHAG00000012513	-	100	92.978	ENSSBOG00000023754	-	100	92.760	Saimiri_boliviensis_boliviensis
ENSSHAG00000012513	-	100	73.883	ENSSFOG00015023759	chd2	100	74.260	Scleropages_formosus
ENSSHAG00000012513	-	96	72.458	ENSSMAG00000001726	chd2	100	71.903	Scophthalmus_maximus
ENSSHAG00000012513	-	96	71.493	ENSSLDG00000001146	chd2	100	70.897	Seriola_lalandi_dorsalis
ENSSHAG00000012513	-	77	98.333	ENSSARG00000014112	-	80	98.333	Sorex_araneus
ENSSHAG00000012513	-	99	85.950	ENSSPUG00000011266	-	99	86.652	Sphenodon_punctatus
ENSSHAG00000012513	-	96	72.447	ENSSPAG00000016452	chd2	100	71.961	Stegastes_partitus
ENSSHAG00000012513	-	100	93.145	ENSSSCG00000002266	-	100	94.062	Sus_scrofa
ENSSHAG00000012513	-	100	91.240	ENSTGUG00000008540	-	100	91.077	Taeniopygia_guttata
ENSSHAG00000012513	-	83	70.097	ENSTRUG00000008842	chd2	87	69.151	Takifugu_rubripes
ENSSHAG00000012513	-	87	74.443	ENSTNIG00000010760	chd2	97	74.213	Tetraodon_nigroviridis
ENSSHAG00000012513	-	72	94.714	ENSTBEG00000017730	-	83	94.714	Tupaia_belangeri
ENSSHAG00000012513	-	95	92.727	ENSTTRG00000000430	-	90	92.727	Tursiops_truncatus
ENSSHAG00000012513	-	100	90.474	ENSUMAG00000000083	-	100	90.201	Ursus_maritimus
ENSSHAG00000012513	-	83	97.473	ENSVPAG00000009645	-	86	97.473	Vicugna_pacos
ENSSHAG00000012513	-	90	74.232	ENSXETG00000024129	chd2	99	73.821	Xenopus_tropicalis
ENSSHAG00000012513	-	96	69.438	ENSXCOG00000020255	chd2	99	72.869	Xiphophorus_couchianus
ENSSHAG00000012513	-	100	71.949	ENSXMAG00000002707	chd2	100	72.893	Xiphophorus_maculatus