EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000012578 (Gene tree)
Gene ID: 100934596
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 3582 bases
Position: chrGL849634.1:1059264-1062845
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000014733	ResIII	PF04851.15	4.5e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000014858	-	3582	-	ENSSHAP00000014733	1193 (aa)	-	G3WH28

Gene Model

Click here to download ENSSHAG00000012578's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000012578's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000012578	-	90	76.531	ENSSHAG00000001331	-	99	76.531

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000012578	-	99	60.803	ENSG00000186871	ERCC6L	99	60.946	Homo_sapiens
ENSSHAG00000012578	-	56	59.760	ENSAPOG00000011392	ercc6l	99	59.760	Acanthochromis_polyacanthus
ENSSHAG00000012578	-	99	59.631	ENSAMEG00000005804	ERCC6L	99	59.631	Ailuropoda_melanoleuca
ENSSHAG00000012578	-	63	58.495	ENSAOCG00000016323	ercc6l	62	58.495	Amphiprion_ocellaris
ENSSHAG00000012578	-	67	60.546	ENSAPEG00000022533	ERCC6L	79	60.546	Amphiprion_percula
ENSSHAG00000012578	-	64	60.784	ENSATEG00000012969	ercc6l	82	60.784	Anabas_testudineus
ENSSHAG00000012578	-	88	51.250	ENSACAG00000001226	-	99	50.433	Anolis_carolinensis
ENSSHAG00000012578	-	55	64.820	ENSACAG00000029354	-	96	65.269	Anolis_carolinensis
ENSSHAG00000012578	-	59	61.765	ENSACAG00000028866	-	98	62.447	Anolis_carolinensis
ENSSHAG00000012578	-	99	59.330	ENSANAG00000022378	ERCC6L	99	59.395	Aotus_nancymaae
ENSSHAG00000012578	-	98	44.444	ENSACLG00000006555	ercc6l	97	44.418	Astatotilapia_calliptera
ENSSHAG00000012578	-	81	58.364	ENSAMXG00000004780	ercc6l	80	58.364	Astyanax_mexicanus
ENSSHAG00000012578	-	99	58.426	ENSBTAG00000005607	ERCC6L	99	58.566	Bos_taurus
ENSSHAG00000012578	-	99	58.420	ENSCJAG00000022332	ERCC6L	99	58.500	Callithrix_jacchus
ENSSHAG00000012578	-	99	58.833	ENSCAFG00000023690	ERCC6L	98	58.861	Canis_familiaris
ENSSHAG00000012578	-	90	57.458	ENSCAFG00020021313	ERCC6L	100	57.484	Canis_lupus_dingo
ENSSHAG00000012578	-	99	58.981	ENSCHIG00000009967	ERCC6L	99	58.981	Capra_hircus
ENSSHAG00000012578	-	99	59.149	ENSTSYG00000013701	ERCC6L	99	59.535	Carlito_syrichta
ENSSHAG00000012578	-	99	57.899	ENSCPOG00000011407	ERCC6L	99	57.819	Cavia_porcellus
ENSSHAG00000012578	-	99	58.824	ENSCCAG00000023790	ERCC6L	99	59.206	Cebus_capucinus
ENSSHAG00000012578	-	99	60.757	ENSCATG00000038031	ERCC6L	99	60.901	Cercocebus_atys
ENSSHAG00000012578	-	99	56.057	ENSCLAG00000015218	-	99	56.539	Chinchilla_lanigera
ENSSHAG00000012578	-	99	56.691	ENSCLAG00000017785	-	99	56.529	Chinchilla_lanigera
ENSSHAG00000012578	-	98	60.954	ENSCSAG00000011173	ERCC6L	98	61.098	Chlorocebus_sabaeus
ENSSHAG00000012578	-	98	52.408	ENSCPBG00000011965	ERCC6L	82	71.037	Chrysemys_picta_bellii
ENSSHAG00000012578	-	99	60.723	ENSCANG00000016909	ERCC6L	99	60.866	Colobus_angolensis_palliatus
ENSSHAG00000012578	-	99	55.801	ENSCGRG00001016668	Ercc6l	99	55.880	Cricetulus_griseus_chok1gshd
ENSSHAG00000012578	-	99	55.801	ENSCGRG00000006223	Ercc6l	99	55.880	Cricetulus_griseus_crigri
ENSSHAG00000012578	-	75	60.724	ENSCSEG00000010268	ercc6l	78	60.864	Cynoglossus_semilaevis
ENSSHAG00000012578	-	57	59.618	ENSCVAG00000008090	ercc6l	96	59.618	Cyprinodon_variegatus
ENSSHAG00000012578	-	71	59.399	ENSDARG00000002479	ercc6l	63	57.038	Danio_rerio
ENSSHAG00000012578	-	99	59.790	ENSDNOG00000032356	ERCC6L	99	59.790	Dasypus_novemcinctus
ENSSHAG00000012578	-	99	56.532	ENSDORG00000007865	Ercc6l	99	57.131	Dipodomys_ordii
ENSSHAG00000012578	-	81	76.374	ENSETEG00000018007	ERCC6L	93	76.374	Echinops_telfairi
ENSSHAG00000012578	-	90	57.573	ENSEASG00005007025	ERCC6L	100	57.471	Equus_asinus_asinus
ENSSHAG00000012578	-	99	59.357	ENSECAG00000002513	ERCC6L	99	59.262	Equus_caballus
ENSSHAG00000012578	-	79	74.534	ENSEEUG00000015724	ERCC6L	82	74.534	Erinaceus_europaeus
ENSSHAG00000012578	-	98	44.763	ENSELUG00000007917	ercc6l	99	45.801	Esox_lucius
ENSSHAG00000012578	-	99	60.562	ENSFCAG00000012038	ERCC6L	99	60.562	Felis_catus
ENSSHAG00000012578	-	93	49.129	ENSFALG00000011797	ERCC6L	99	49.277	Ficedula_albicollis
ENSSHAG00000012578	-	99	58.313	ENSFDAG00000019713	ERCC6L	99	58.233	Fukomys_damarensis
ENSSHAG00000012578	-	68	58.847	ENSFHEG00000007205	ercc6l	89	59.284	Fundulus_heteroclitus
ENSSHAG00000012578	-	54	58.514	ENSFHEG00000007269	-	94	58.514	Fundulus_heteroclitus
ENSSHAG00000012578	-	93	55.224	ENSGALG00000003881	ERCC6L	99	48.518	Gallus_gallus
ENSSHAG00000012578	-	90	50.603	ENSGAGG00000018784	ERCC6L	99	51.077	Gopherus_agassizii
ENSSHAG00000012578	-	99	60.981	ENSGGOG00000022367	ERCC6L	99	60.981	Gorilla_gorilla
ENSSHAG00000012578	-	98	44.677	ENSHBUG00000007810	ercc6l	99	44.597	Haplochromis_burtoni
ENSSHAG00000012578	-	99	57.958	ENSHGLG00000016594	ERCC6L	99	58.119	Heterocephalus_glaber_female
ENSSHAG00000012578	-	99	57.958	ENSHGLG00100003339	ERCC6L	99	58.119	Heterocephalus_glaber_male
ENSSHAG00000012578	-	72	61.250	ENSHCOG00000001051	ercc6l	66	61.250	Hippocampus_comes
ENSSHAG00000012578	-	65	56.890	ENSIPUG00000016117	ercc6l	62	57.269	Ictalurus_punctatus
ENSSHAG00000012578	-	98	58.041	ENSJJAG00000022875	Ercc6l	98	57.993	Jaculus_jaculus
ENSSHAG00000012578	-	63	56.771	ENSKMAG00000011587	ercc6l	65	56.771	Kryptolebias_marmoratus
ENSSHAG00000012578	-	72	60.559	ENSLBEG00000000091	ercc6l	83	60.475	Labrus_bergylta
ENSSHAG00000012578	-	87	57.503	ENSLACG00000002634	ERCC6L	84	57.503	Latimeria_chalumnae
ENSSHAG00000012578	-	98	46.271	ENSLOCG00000013925	ercc6l	99	46.363	Lepisosteus_oculatus
ENSSHAG00000012578	-	99	59.501	ENSLAFG00000014985	ERCC6L	99	59.580	Loxodonta_africana
ENSSHAG00000012578	-	99	61.035	ENSMFAG00000045509	ERCC6L	99	61.178	Macaca_fascicularis
ENSSHAG00000012578	-	99	60.999	ENSMMUG00000012957	ERCC6L	99	61.142	Macaca_mulatta
ENSSHAG00000012578	-	99	60.999	ENSMNEG00000030867	ERCC6L	99	61.142	Macaca_nemestrina
ENSSHAG00000012578	-	99	60.723	ENSMLEG00000000190	ERCC6L	99	60.866	Mandrillus_leucophaeus
ENSSHAG00000012578	-	60	59.290	ENSMAMG00000018595	ercc6l	80	59.290	Mastacembelus_armatus
ENSSHAG00000012578	-	98	44.696	ENSMZEG00005001556	ercc6l	97	44.696	Maylandia_zebra
ENSSHAG00000012578	-	98	49.127	ENSMGAG00000002094	ERCC6L	99	49.167	Meleagris_gallopavo
ENSSHAG00000012578	-	98	56.934	ENSMAUG00000015560	Ercc6l	98	56.853	Mesocricetus_auratus
ENSSHAG00000012578	-	99	58.546	ENSMICG00000035415	ERCC6L	99	58.546	Microcebus_murinus
ENSSHAG00000012578	-	99	56.877	ENSMOCG00000021344	Ercc6l	99	56.958	Microtus_ochrogaster
ENSSHAG00000012578	-	68	55.139	ENSMMOG00000020762	ercc6l	93	63.487	Mola_mola
ENSSHAG00000012578	-	98	73.765	ENSMODG00000010916	ERCC6L	98	73.828	Monodelphis_domestica
ENSSHAG00000012578	-	83	59.530	ENSMALG00000003609	ercc6l	62	59.945	Monopterus_albus
ENSSHAG00000012578	-	61	58.784	ENSMALG00000003561	-	56	58.784	Monopterus_albus
ENSSHAG00000012578	-	99	55.397	MGP_CAROLIEiJ_G0033297	Ercc6l	99	55.777	Mus_caroli
ENSSHAG00000012578	-	99	55.857	ENSMUSG00000051220	Ercc6l	99	56.080	Mus_musculus
ENSSHAG00000012578	-	99	56.335	MGP_PahariEiJ_G0031835	Ercc6l	99	56.574	Mus_pahari
ENSSHAG00000012578	-	99	55.984	MGP_SPRETEiJ_G0034461	Ercc6l	99	56.437	Mus_spretus
ENSSHAG00000012578	-	99	58.795	ENSMPUG00000005291	ERCC6L	99	59.116	Mustela_putorius_furo
ENSSHAG00000012578	-	98	60.081	ENSMLUG00000011670	ERCC6L	100	60.162	Myotis_lucifugus
ENSSHAG00000012578	-	99	57.212	ENSNGAG00000021063	Ercc6l	99	57.109	Nannospalax_galili
ENSSHAG00000012578	-	99	60.418	ENSNLEG00000036284	ERCC6L	99	60.562	Nomascus_leucogenys
ENSSHAG00000012578	-	98	57.308	ENSODEG00000002328	ERCC6L	100	57.225	Octodon_degus
ENSSHAG00000012578	-	98	45.647	ENSONIG00000000589	ercc6l	99	45.840	Oreochromis_niloticus
ENSSHAG00000012578	-	98	56.046	ENSOANG00000014708	ERCC6L	98	56.209	Ornithorhynchus_anatinus
ENSSHAG00000012578	-	98	57.963	ENSOCUG00000008724	ERCC6L	99	58.239	Oryctolagus_cuniculus
ENSSHAG00000012578	-	57	56.996	ENSORLG00000024240	ercc6l	95	57.143	Oryzias_latipes
ENSSHAG00000012578	-	98	45.816	ENSORLG00020014999	ercc6l	98	46.115	Oryzias_latipes_hni
ENSSHAG00000012578	-	67	58.511	ENSOMEG00000009481	ercc6l	63	58.511	Oryzias_melastigma
ENSSHAG00000012578	-	98	58.933	ENSOGAG00000034301	-	100	58.985	Otolemur_garnettii
ENSSHAG00000012578	-	99	58.552	ENSOGAG00000031470	-	99	58.604	Otolemur_garnettii
ENSSHAG00000012578	-	98	58.814	ENSOARG00000005908	ERCC6L	99	58.958	Ovis_aries
ENSSHAG00000012578	-	99	60.772	ENSPPAG00000031861	ERCC6L	99	60.915	Pan_paniscus
ENSSHAG00000012578	-	98	60.852	ENSPPRG00000012408	ERCC6L	99	60.852	Panthera_pardus
ENSSHAG00000012578	-	99	60.803	ENSPTRG00000022023	ERCC6L	99	60.946	Pan_troglodytes
ENSSHAG00000012578	-	99	60.999	ENSPANG00000011598	ERCC6L	99	61.142	Papio_anubis
ENSSHAG00000012578	-	86	58.981	ENSPKIG00000022325	ercc6l	83	59.407	Paramormyrops_kingsleyae
ENSSHAG00000012578	-	98	51.088	ENSPSIG00000004789	ERCC6L	99	51.007	Pelodiscus_sinensis
ENSSHAG00000012578	-	64	57.692	ENSPMGG00000023343	ercc6l	67	62.069	Periophthalmus_magnuspinnatus
ENSSHAG00000012578	-	99	56.601	ENSPEMG00000007920	Ercc6l	99	56.522	Peromyscus_maniculatus_bairdii
ENSSHAG00000012578	-	64	53.924	ENSPMAG00000005064	ercc6l	98	56.601	Petromyzon_marinus
ENSSHAG00000012578	-	99	81.621	ENSPCIG00000026973	ERCC6L	97	81.667	Phascolarctos_cinereus
ENSSHAG00000012578	-	66	60.112	ENSPFOG00000010410	ercc6l	65	60.391	Poecilia_formosa
ENSSHAG00000012578	-	66	60.112	ENSPLAG00000005575	ercc6l	70	62.336	Poecilia_latipinna
ENSSHAG00000012578	-	66	60.251	ENSPMEG00000016911	ercc6l	67	59.030	Poecilia_mexicana
ENSSHAG00000012578	-	63	61.856	ENSPREG00000017617	ercc6l	91	62.150	Poecilia_reticulata
ENSSHAG00000012578	-	99	61.013	ENSPPYG00000020461	ERCC6L	99	61.156	Pongo_abelii
ENSSHAG00000012578	-	59	74.044	ENSPCAG00000002981	-	67	74.044	Procavia_capensis
ENSSHAG00000012578	-	99	59.076	ENSPCOG00000024286	ERCC6L	99	59.076	Propithecus_coquereli
ENSSHAG00000012578	-	99	56.809	ENSPVAG00000013596	ERCC6L	99	56.924	Pteropus_vampyrus
ENSSHAG00000012578	-	88	58.778	ENSPNYG00000013185	ercc6l	98	58.778	Pundamilia_nyererei
ENSSHAG00000012578	-	62	60.927	ENSPNAG00000006556	ercc6l	66	60.927	Pygocentrus_nattereri
ENSSHAG00000012578	-	99	56.694	ENSRNOG00000003208	Ercc6l	99	56.856	Rattus_norvegicus
ENSSHAG00000012578	-	97	61.240	ENSRBIG00000036588	ERCC6L	99	61.386	Rhinopithecus_bieti
ENSSHAG00000012578	-	99	61.044	ENSRROG00000042561	ERCC6L	99	61.187	Rhinopithecus_roxellana
ENSSHAG00000012578	-	99	58.903	ENSSBOG00000029416	ERCC6L	99	59.840	Saimiri_boliviensis_boliviensis
ENSSHAG00000012578	-	75	61.438	ENSSFOG00015009709	ercc6l	64	61.438	Scleropages_formosus
ENSSHAG00000012578	-	67	54.227	ENSSDUG00000013307	ercc6l	98	44.318	Seriola_dumerili
ENSSHAG00000012578	-	60	59.203	ENSSLDG00000014910	ercc6l	65	59.203	Seriola_lalandi_dorsalis
ENSSHAG00000012578	-	88	52.849	ENSSPUG00000005866	ERCC6L	95	52.231	Sphenodon_punctatus
ENSSHAG00000012578	-	66	60.212	ENSSPAG00000018472	ercc6l	76	60.212	Stegastes_partitus
ENSSHAG00000012578	-	99	59.680	ENSSSCG00000021834	ERCC6L	99	59.537	Sus_scrofa
ENSSHAG00000012578	-	71	59.836	ENSTRUG00000012053	ercc6l	99	45.512	Takifugu_rubripes
ENSSHAG00000012578	-	99	59.138	ENSTTRG00000010777	ERCC6L	99	58.997	Tursiops_truncatus
ENSSHAG00000012578	-	90	57.699	ENSUAMG00000015605	ERCC6L	100	57.662	Ursus_americanus
ENSSHAG00000012578	-	90	57.788	ENSUMAG00000004863	ERCC6L	100	57.750	Ursus_maritimus
ENSSHAG00000012578	-	99	60.016	ENSVPAG00000010950	ERCC6L	99	60.016	Vicugna_pacos
ENSSHAG00000012578	-	99	59.171	ENSVVUG00000025512	ERCC6L	98	59.171	Vulpes_vulpes
ENSSHAG00000012578	-	63	61.307	ENSXETG00000022574	ercc6l	100	47.879	Xenopus_tropicalis
ENSSHAG00000012578	-	53	61.208	ENSXCOG00000011494	ercc6l	90	61.208	Xiphophorus_couchianus
ENSSHAG00000012578	-	63	61.119	ENSXMAG00000000948	ercc6l	72	61.660	Xiphophorus_maculatus