EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

Orthologs

Description

Ensembl ID: ENSSHAG00000012701 (Gene tree)
Gene ID: 100928904
Gene Symbol: SETDB1
Alias: ESET|KG1T|KIAA0067|KMT1E|TDRD21
Full Name: SET domain bifurcated 1
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 23223 bases
Position: chrGL856997.1:1084176-1107398
Accession: 100928904
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000014887	MBD	PF01429.19	1.7e-12	1	1
ENSSHAP00000014886	MBD	PF01429.19	1.7e-12	1	1
ENSSHAP00000014885	MBD	PF01429.19	1.8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000015011	SETDB1-202	3874	-	ENSSHAP00000014886	1287 (aa)	-	G3WHI1
ENSSHAT00000015010	SETDB1-201	3910	-	ENSSHAP00000014885	1299 (aa)	-	G3WHI0
ENSSHAT00000015012	SETDB1-203	3844	-	ENSSHAP00000014887	1277 (aa)	XP_003770007	G3WHI2

Gene Model

Click here to download ENSSHAG00000012701's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr00310	Lysine degradation	KEGG
shr04550	Signaling pathways regulating pluripotency of stem cells	KEGG

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000012701	SETDB1	100	86.244	ENSG00000143379	SETDB1	100	86.718	Homo_sapiens
ENSSHAG00000012701	SETDB1	55	64.851	ENSAPOG00000016228	setdb1b	98	69.231	Acanthochromis_polyacanthus
ENSSHAG00000012701	SETDB1	100	86.220	ENSAMEG00000001160	SETDB1	100	86.759	Ailuropoda_melanoleuca
ENSSHAG00000012701	SETDB1	88	70.000	ENSACIG00000007359	setdb1b	98	70.000	Amphilophus_citrinellus
ENSSHAG00000012701	SETDB1	89	67.010	ENSAOCG00000005586	setdb1b	99	67.010	Amphiprion_ocellaris
ENSSHAG00000012701	SETDB1	81	67.102	ENSAPEG00000007774	setdb1b	99	67.010	Amphiprion_percula
ENSSHAG00000012701	SETDB1	96	59.910	ENSATEG00000023520	setdb1b	99	68.681	Anabas_testudineus
ENSSHAG00000012701	SETDB1	99	77.446	ENSAPLG00000013908	SETDB1	100	77.294	Anas_platyrhynchos
ENSSHAG00000012701	SETDB1	100	86.620	ENSANAG00000001819	SETDB1	100	86.795	Aotus_nancymaae
ENSSHAG00000012701	SETDB1	99	57.666	ENSACLG00000020489	setdb1b	99	58.631	Astatotilapia_calliptera
ENSSHAG00000012701	SETDB1	92	52.769	ENSAMXG00000016168	setdb1b	97	74.286	Astyanax_mexicanus
ENSSHAG00000012701	SETDB1	71	57.764	ENSAMXG00000010030	setdb1a	68	57.764	Astyanax_mexicanus
ENSSHAG00000012701	SETDB1	100	86.744	ENSBTAG00000000098	SETDB1	100	86.744	Bos_taurus
ENSSHAG00000012701	SETDB1	100	86.265	ENSCJAG00000006972	SETDB1	100	86.441	Callithrix_jacchus
ENSSHAG00000012701	SETDB1	100	86.476	ENSCAFG00000023501	SETDB1	100	86.862	Canis_familiaris
ENSSHAG00000012701	SETDB1	100	86.553	ENSCAFG00020013596	SETDB1	100	86.940	Canis_lupus_dingo
ENSSHAG00000012701	SETDB1	100	87.102	ENSCHIG00000010698	SETDB1	100	87.257	Capra_hircus
ENSSHAG00000012701	SETDB1	81	86.500	ENSTSYG00000012646	SETDB1	100	87.283	Carlito_syrichta
ENSSHAG00000012701	SETDB1	77	90.726	ENSCAPG00000013619	SETDB1	100	89.683	Cavia_aperea
ENSSHAG00000012701	SETDB1	100	86.600	ENSCPOG00000001632	SETDB1	100	86.765	Cavia_porcellus
ENSSHAG00000012701	SETDB1	100	86.420	ENSCCAG00000024882	SETDB1	100	86.595	Cebus_capucinus
ENSSHAG00000012701	SETDB1	100	82.844	ENSCATG00000044888	SETDB1	100	83.320	Cercocebus_atys
ENSSHAG00000012701	SETDB1	100	85.758	ENSCLAG00000000242	SETDB1	100	86.164	Chinchilla_lanigera
ENSSHAG00000012701	SETDB1	88	86.591	ENSCSAG00000018034	SETDB1	100	87.128	Chlorocebus_sabaeus
ENSSHAG00000012701	SETDB1	100	78.710	ENSCHOG00000004013	SETDB1	100	78.866	Choloepus_hoffmanni
ENSSHAG00000012701	SETDB1	99	80.077	ENSCPBG00000008716	SETDB1	100	80.000	Chrysemys_picta_bellii
ENSSHAG00000012701	SETDB1	88	87.989	ENSCANG00000036388	SETDB1	98	86.316	Colobus_angolensis_palliatus
ENSSHAG00000012701	SETDB1	100	85.214	ENSCGRG00001010822	Setdb1	100	85.603	Cricetulus_griseus_chok1gshd
ENSSHAG00000012701	SETDB1	100	84.981	ENSCGRG00000005953	Setdb1	100	85.292	Cricetulus_griseus_crigri
ENSSHAG00000012701	SETDB1	89	63.415	ENSCSEG00000002988	setdb1b	98	69.189	Cynoglossus_semilaevis
ENSSHAG00000012701	SETDB1	90	68.449	ENSCVAG00000008877	setdb1b	98	68.984	Cyprinodon_variegatus
ENSSHAG00000012701	SETDB1	89	66.834	ENSDARG00000099021	setdb1b	99	55.193	Danio_rerio
ENSSHAG00000012701	SETDB1	62	70.866	ENSDARG00000041243	setdb1a	67	70.866	Danio_rerio
ENSSHAG00000012701	SETDB1	100	86.940	ENSDNOG00000007754	SETDB1	100	87.403	Dasypus_novemcinctus
ENSSHAG00000012701	SETDB1	100	84.182	ENSDORG00000006830	Setdb1	100	84.954	Dipodomys_ordii
ENSSHAG00000012701	SETDB1	71	45.720	ENSEBUG00000005735	setdb1b	95	46.885	Eptatretus_burgeri
ENSSHAG00000012701	SETDB1	100	87.221	ENSEASG00005002061	SETDB1	100	87.317	Equus_asinus_asinus
ENSSHAG00000012701	SETDB1	100	87.144	ENSECAG00000023954	SETDB1	100	87.241	Equus_caballus
ENSSHAG00000012701	SETDB1	83	88.186	ENSEEUG00000015825	SETDB1	83	88.186	Erinaceus_europaeus
ENSSHAG00000012701	SETDB1	88	76.647	ENSELUG00000013948	setdb1b	98	76.647	Esox_lucius
ENSSHAG00000012701	SETDB1	71	69.149	ENSELUG00000006204	-	71	69.149	Esox_lucius
ENSSHAG00000012701	SETDB1	100	85.848	ENSFCAG00000009655	SETDB1	100	86.025	Felis_catus
ENSSHAG00000012701	SETDB1	100	86.057	ENSFDAG00000021515	SETDB1	100	86.388	Fukomys_damarensis
ENSSHAG00000012701	SETDB1	90	65.803	ENSFHEG00000022195	setdb1b	98	66.839	Fundulus_heteroclitus
ENSSHAG00000012701	SETDB1	87	76.471	ENSGMOG00000005993	setdb1b	93	76.471	Gadus_morhua
ENSSHAG00000012701	SETDB1	99	75.559	ENSGALG00000024051	SETDB1	92	75.405	Gallus_gallus
ENSSHAG00000012701	SETDB1	87	65.376	ENSGAFG00000012805	setdb1b	99	57.386	Gambusia_affinis
ENSSHAG00000012701	SETDB1	87	72.515	ENSGACG00000011675	setdb1b	93	73.684	Gasterosteus_aculeatus
ENSSHAG00000012701	SETDB1	99	80.216	ENSGAGG00000005348	SETDB1	100	80.062	Gopherus_agassizii
ENSSHAG00000012701	SETDB1	100	86.476	ENSGGOG00000016308	SETDB1	100	86.950	Gorilla_gorilla
ENSSHAG00000012701	SETDB1	100	86.002	ENSHGLG00000011098	SETDB1	100	86.388	Heterocephalus_glaber_female
ENSSHAG00000012701	SETDB1	100	85.151	ENSHGLG00100009789	SETDB1	100	85.538	Heterocephalus_glaber_male
ENSSHAG00000012701	SETDB1	89	68.108	ENSHCOG00000014567	setdb1b	98	68.649	Hippocampus_comes
ENSSHAG00000012701	SETDB1	66	66.197	ENSIPUG00000007923	setdb1a	72	66.197	Ictalurus_punctatus
ENSSHAG00000012701	SETDB1	88	67.857	ENSIPUG00000004536	setdb1	97	72.989	Ictalurus_punctatus
ENSSHAG00000012701	SETDB1	100	85.118	ENSSTOG00000006770	SETDB1	100	85.497	Ictidomys_tridecemlineatus
ENSSHAG00000012701	SETDB1	88	68.280	ENSKMAG00000001197	setdb1b	98	68.817	Kryptolebias_marmoratus
ENSSHAG00000012701	SETDB1	89	67.027	ENSLBEG00000025862	setdb1b	98	67.568	Labrus_bergylta
ENSSHAG00000012701	SETDB1	99	69.592	ENSLACG00000011159	SETDB1	100	69.654	Latimeria_chalumnae
ENSSHAG00000012701	SETDB1	100	85.638	ENSLAFG00000004006	SETDB1	100	85.780	Loxodonta_africana
ENSSHAG00000012701	SETDB1	100	86.167	ENSMFAG00000042328	SETDB1	100	86.641	Macaca_fascicularis
ENSSHAG00000012701	SETDB1	100	86.321	ENSMMUG00000023235	SETDB1	100	86.718	Macaca_mulatta
ENSSHAG00000012701	SETDB1	100	86.090	ENSMNEG00000017223	SETDB1	100	86.564	Macaca_nemestrina
ENSSHAG00000012701	SETDB1	100	86.167	ENSMLEG00000033050	SETDB1	100	86.641	Mandrillus_leucophaeus
ENSSHAG00000012701	SETDB1	93	67.416	ENSMAMG00000015176	setdb1b	86	68.750	Mastacembelus_armatus
ENSSHAG00000012701	SETDB1	99	57.666	ENSMZEG00005016099	setdb1b	99	58.631	Maylandia_zebra
ENSSHAG00000012701	SETDB1	87	72.662	ENSMGAG00000001018	SETDB1	97	72.662	Meleagris_gallopavo
ENSSHAG00000012701	SETDB1	88	85.988	ENSMAUG00000021391	Setdb1	100	86.276	Mesocricetus_auratus
ENSSHAG00000012701	SETDB1	100	86.913	ENSMICG00000000425	SETDB1	100	87.047	Microcebus_murinus
ENSSHAG00000012701	SETDB1	100	83.963	ENSMOCG00000017407	Setdb1	100	84.271	Microtus_ochrogaster
ENSSHAG00000012701	SETDB1	89	63.235	ENSMMOG00000016162	setdb1b	99	68.108	Mola_mola
ENSSHAG00000012701	SETDB1	99	95.827	ENSMODG00000018821	SETDB1	90	95.827	Monodelphis_domestica
ENSSHAG00000012701	SETDB1	88	72.353	ENSMALG00000007801	setdb1b	98	73.494	Monopterus_albus
ENSSHAG00000012701	SETDB1	100	84.456	MGP_CAROLIEiJ_G0025342	Setdb1	100	84.686	Mus_caroli
ENSSHAG00000012701	SETDB1	100	83.957	ENSMUSG00000015697	Setdb1	100	84.527	Mus_musculus
ENSSHAG00000012701	SETDB1	100	81.804	ENSMPUG00000004298	SETDB1	100	82.339	Mustela_putorius_furo
ENSSHAG00000012701	SETDB1	100	84.913	ENSMLUG00000010486	SETDB1	100	85.281	Myotis_lucifugus
ENSSHAG00000012701	SETDB1	100	84.922	ENSNGAG00000020151	Setdb1	100	85.078	Nannospalax_galili
ENSSHAG00000012701	SETDB1	88	70.270	ENSNBRG00000003147	setdb1b	99	70.811	Neolamprologus_brichardi
ENSSHAG00000012701	SETDB1	100	83.588	ENSNLEG00000009996	SETDB1	100	83.765	Nomascus_leucogenys
ENSSHAG00000012701	SETDB1	100	86.105	ENSMEUG00000000555	-	100	86.651	Notamacropus_eugenii
ENSSHAG00000012701	SETDB1	89	95.225	ENSMEUG00000006544	-	88	95.473	Notamacropus_eugenii
ENSSHAG00000012701	SETDB1	97	84.640	ENSOPRG00000015349	SETDB1	100	85.120	Ochotona_princeps
ENSSHAG00000012701	SETDB1	100	86.424	ENSODEG00000012471	SETDB1	100	86.579	Octodon_degus
ENSSHAG00000012701	SETDB1	89	69.149	ENSONIG00000006454	setdb1b	99	69.681	Oreochromis_niloticus
ENSSHAG00000012701	SETDB1	100	86.034	ENSOCUG00000003642	SETDB1	100	86.133	Oryctolagus_cuniculus
ENSSHAG00000012701	SETDB1	94	64.356	ENSORLG00000010602	setdb1b	99	66.495	Oryzias_latipes
ENSSHAG00000012701	SETDB1	58	81.098	ENSORLG00020008638	setdb1b	97	62.011	Oryzias_latipes_hni
ENSSHAG00000012701	SETDB1	94	62.802	ENSORLG00015014543	setdb1b	99	64.824	Oryzias_latipes_hsok
ENSSHAG00000012701	SETDB1	91	64.677	ENSOMEG00000009457	setdb1b	99	67.708	Oryzias_melastigma
ENSSHAG00000012701	SETDB1	100	82.535	ENSOGAG00000010320	SETDB1	100	82.767	Otolemur_garnettii
ENSSHAG00000012701	SETDB1	100	86.687	ENSOARG00000020880	SETDB1	100	86.920	Ovis_aries
ENSSHAG00000012701	SETDB1	100	86.321	ENSPPAG00000041015	SETDB1	100	86.718	Pan_paniscus
ENSSHAG00000012701	SETDB1	100	86.667	ENSPPRG00000005462	SETDB1	100	87.064	Panthera_pardus
ENSSHAG00000012701	SETDB1	100	86.568	ENSPTIG00000014233	SETDB1	100	86.724	Panthera_tigris_altaica
ENSSHAG00000012701	SETDB1	100	86.167	ENSPTRG00000001267	SETDB1	100	86.641	Pan_troglodytes
ENSSHAG00000012701	SETDB1	100	84.068	ENSPANG00000020214	SETDB1	100	84.247	Papio_anubis
ENSSHAG00000012701	SETDB1	98	57.341	ENSPKIG00000010963	setdb1b	100	57.352	Paramormyrops_kingsleyae
ENSSHAG00000012701	SETDB1	57	79.810	ENSPSIG00000008407	SETDB1	85	79.539	Pelodiscus_sinensis
ENSSHAG00000012701	SETDB1	93	86.489	ENSPEMG00000010553	Setdb1	100	86.906	Peromyscus_maniculatus_bairdii
ENSSHAG00000012701	SETDB1	98	50.983	ENSPMAG00000001573	setdb1b	92	73.780	Petromyzon_marinus
ENSSHAG00000012701	SETDB1	98	57.099	ENSPFOG00000004623	-	98	57.252	Poecilia_formosa
ENSSHAG00000012701	SETDB1	98	56.298	ENSPFOG00000004429	setdb1b	97	70.330	Poecilia_formosa
ENSSHAG00000012701	SETDB1	98	55.236	ENSPLAG00000019076	-	99	57.197	Poecilia_latipinna
ENSSHAG00000012701	SETDB1	95	55.258	ENSPLAG00000017117	setdb1b	99	57.197	Poecilia_latipinna
ENSSHAG00000012701	SETDB1	98	54.848	ENSPREG00000017459	setdb1b	99	57.170	Poecilia_reticulata
ENSSHAG00000012701	SETDB1	100	86.167	ENSPPYG00000000887	SETDB1	100	86.718	Pongo_abelii
ENSSHAG00000012701	SETDB1	85	84.664	ENSPCAG00000002527	SETDB1	100	84.741	Procavia_capensis
ENSSHAG00000012701	SETDB1	100	86.687	ENSPCOG00000027869	SETDB1	100	87.181	Propithecus_coquereli
ENSSHAG00000012701	SETDB1	93	85.507	ENSPVAG00000004355	SETDB1	93	85.832	Pteropus_vampyrus
ENSSHAG00000012701	SETDB1	88	69.681	ENSPNYG00000003997	setdb1b	98	69.681	Pundamilia_nyererei
ENSSHAG00000012701	SETDB1	88	66.500	ENSPNAG00000021617	setdb1b	98	70.492	Pygocentrus_nattereri
ENSSHAG00000012701	SETDB1	75	63.014	ENSPNAG00000003444	setdb1a	63	63.014	Pygocentrus_nattereri
ENSSHAG00000012701	SETDB1	100	84.114	ENSRNOG00000021143	Setdb1	100	84.533	Rattus_norvegicus
ENSSHAG00000012701	SETDB1	100	86.012	ENSRBIG00000042359	SETDB1	100	86.486	Rhinopithecus_bieti
ENSSHAG00000012701	SETDB1	100	86.167	ENSRROG00000032628	SETDB1	100	86.641	Rhinopithecus_roxellana
ENSSHAG00000012701	SETDB1	100	86.220	ENSSBOG00000028608	SETDB1	100	85.857	Saimiri_boliviensis_boliviensis
ENSSHAG00000012701	SETDB1	89	69.347	ENSSFOG00015022183	setdb1	96	76.000	Scleropages_formosus
ENSSHAG00000012701	SETDB1	94	61.927	ENSSMAG00000015398	setdb1b	99	66.169	Scophthalmus_maximus
ENSSHAG00000012701	SETDB1	96	60.987	ENSSDUG00000007513	setdb1b	99	67.708	Seriola_dumerili
ENSSHAG00000012701	SETDB1	96	60.987	ENSSLDG00000015209	setdb1b	99	67.526	Seriola_lalandi_dorsalis
ENSSHAG00000012701	SETDB1	99	77.708	ENSSPUG00000002969	SETDB1	100	77.123	Sphenodon_punctatus
ENSSHAG00000012701	SETDB1	100	86.610	ENSSSCG00000006645	SETDB1	100	86.842	Sus_scrofa
ENSSHAG00000012701	SETDB1	94	73.693	ENSTGUG00000004684	SETDB1	100	73.633	Taeniopygia_guttata
ENSSHAG00000012701	SETDB1	91	67.760	ENSTRUG00000014641	setdb1b	98	67.760	Takifugu_rubripes
ENSSHAG00000012701	SETDB1	99	53.490	ENSTNIG00000008065	setdb1b	93	68.889	Tetraodon_nigroviridis
ENSSHAG00000012701	SETDB1	93	87.083	ENSTBEG00000009306	SETDB1	100	87.510	Tupaia_belangeri
ENSSHAG00000012701	SETDB1	89	85.341	ENSTTRG00000006966	SETDB1	89	86.259	Tursiops_truncatus
ENSSHAG00000012701	SETDB1	100	85.912	ENSUAMG00000026724	SETDB1	100	86.703	Ursus_americanus
ENSSHAG00000012701	SETDB1	100	82.146	ENSUMAG00000003141	SETDB1	100	82.984	Ursus_maritimus
ENSSHAG00000012701	SETDB1	75	88.095	ENSVPAG00000005440	SETDB1	78	88.095	Vicugna_pacos
ENSSHAG00000012701	SETDB1	100	86.476	ENSVVUG00000011637	SETDB1	100	86.862	Vulpes_vulpes
ENSSHAG00000012701	SETDB1	99	70.322	ENSXETG00000008936	setdb1	99	70.245	Xenopus_tropicalis
ENSSHAG00000012701	SETDB1	98	56.786	ENSXCOG00000019497	setdb1b	90	71.751	Xiphophorus_couchianus