EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000012866 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 1089 bases
Position: chrGL841366.1:1121572-1122660
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000015076	RRM_1	PF00076.22	8.5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000015201	-	753	-	ENSSHAP00000015076	251 (aa)	-	G3WI21

Gene Model

Click here to download ENSSHAG00000012866's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000012866's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000012866	-	74	62.694	ENSSHAG00000010459	ALYREF	95	70.430
ENSSHAG00000012866	-	100	76.834	ENSSHAG00000000609	-	100	76.448

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000012866	-	100	45.247	ENSAPOG00000000183	-	99	45.357	Acanthochromis_polyacanthus
ENSSHAG00000012866	-	99	50.183	ENSACIG00000006351	alyref	97	54.909	Amphilophus_citrinellus
ENSSHAG00000012866	-	99	38.542	ENSACIG00000020351	-	99	44.326	Amphilophus_citrinellus
ENSSHAG00000012866	-	99	53.309	ENSAOCG00000014012	alyref	99	55.273	Amphiprion_ocellaris
ENSSHAG00000012866	-	100	45.946	ENSAOCG00000019305	-	99	48.092	Amphiprion_ocellaris
ENSSHAG00000012866	-	100	46.718	ENSAPEG00000013527	-	99	47.328	Amphiprion_percula
ENSSHAG00000012866	-	99	53.506	ENSAPEG00000014603	alyref	99	55.273	Amphiprion_percula
ENSSHAG00000012866	-	100	47.328	ENSATEG00000000382	-	99	47.328	Anabas_testudineus
ENSSHAG00000012866	-	99	52.158	ENSATEG00000004307	alyref	99	54.676	Anabas_testudineus
ENSSHAG00000012866	-	50	62.963	ENSAPLG00000014745	-	98	70.370	Anas_platyrhynchos
ENSSHAG00000012866	-	99	51.648	ENSACLG00000008432	alyref	99	55.678	Astatotilapia_calliptera
ENSSHAG00000012866	-	73	47.573	ENSACLG00000010184	-	99	42.321	Astatotilapia_calliptera
ENSSHAG00000012866	-	78	57.674	ENSAMXG00000007359	alyref	99	52.759	Astyanax_mexicanus
ENSSHAG00000012866	-	99	39.245	ENSCING00000013568	-	99	39.777	Ciona_intestinalis
ENSSHAG00000012866	-	99	35.907	ENSCSAVG00000003324	-	99	40.530	Ciona_savignyi
ENSSHAG00000012866	-	99	52.222	ENSCSEG00000017800	alyref	99	55.556	Cynoglossus_semilaevis
ENSSHAG00000012866	-	100	41.985	ENSCVAG00000007789	-	99	43.015	Cyprinodon_variegatus
ENSSHAG00000012866	-	99	53.358	ENSCVAG00000014869	alyref	99	55.224	Cyprinodon_variegatus
ENSSHAG00000012866	-	78	58.257	ENSDARG00000077732	alyref	99	54.577	Danio_rerio
ENSSHAG00000012866	-	97	39.630	FBgn0010774	Ref1	98	38.951	Drosophila_melanogaster
ENSSHAG00000012866	-	76	43.878	ENSEBUG00000008253	alyref	96	43.446	Eptatretus_burgeri
ENSSHAG00000012866	-	70	36.898	ENSEBUG00000006305	alyref	99	40.076	Eptatretus_burgeri
ENSSHAG00000012866	-	99	52.593	ENSELUG00000017178	alyref	99	58.519	Esox_lucius
ENSSHAG00000012866	-	99	47.292	ENSELUG00000008849	-	99	49.275	Esox_lucius
ENSSHAG00000012866	-	59	64.744	ENSFALG00000011923	-	97	71.154	Ficedula_albicollis
ENSSHAG00000012866	-	100	39.313	ENSFHEG00000004698	-	99	42.279	Fundulus_heteroclitus
ENSSHAG00000012866	-	99	52.809	ENSFHEG00000019426	alyref	99	57.303	Fundulus_heteroclitus
ENSSHAG00000012866	-	68	50.802	ENSGMOG00000013122	-	99	49.733	Gadus_morhua
ENSSHAG00000012866	-	99	52.672	ENSGMOG00000009882	alyref	99	51.246	Gadus_morhua
ENSSHAG00000012866	-	78	58.537	ENSGAFG00000006014	alyref	99	53.650	Gambusia_affinis
ENSSHAG00000012866	-	100	42.745	ENSGAFG00000007573	-	99	43.431	Gambusia_affinis
ENSSHAG00000012866	-	99	51.648	ENSHBUG00000020196	alyref	99	55.678	Haplochromis_burtoni
ENSSHAG00000012866	-	99	43.431	ENSHBUG00000001454	-	99	44.286	Haplochromis_burtoni
ENSSHAG00000012866	-	99	41.026	ENSHCOG00000012825	-	95	44.528	Hippocampus_comes
ENSSHAG00000012866	-	77	63.054	ENSIPUG00000009469	alyref	98	59.023	Ictalurus_punctatus
ENSSHAG00000012866	-	69	60.345	ENSSTOG00000016570	-	91	66.286	Ictidomys_tridecemlineatus
ENSSHAG00000012866	-	74	57.635	ENSKMAG00000008912	alyref	99	57.143	Kryptolebias_marmoratus
ENSSHAG00000012866	-	100	42.586	ENSKMAG00000006462	-	99	46.063	Kryptolebias_marmoratus
ENSSHAG00000012866	-	99	42.336	ENSLBEG00000012930	-	99	41.026	Labrus_bergylta
ENSSHAG00000012866	-	99	52.692	ENSLBEG00000023118	alyref	89	55.344	Labrus_bergylta
ENSSHAG00000012866	-	99	39.175	ENSLBEG00000005387	-	99	41.489	Labrus_bergylta
ENSSHAG00000012866	-	78	56.682	ENSLOCG00000013879	alyref	90	58.716	Lepisosteus_oculatus
ENSSHAG00000012866	-	100	43.462	ENSMAMG00000005464	-	99	45.247	Mastacembelus_armatus
ENSSHAG00000012866	-	99	52.206	ENSMAMG00000003034	alyref	99	55.678	Mastacembelus_armatus
ENSSHAG00000012866	-	99	51.648	ENSMZEG00005008639	alyref	99	55.678	Maylandia_zebra
ENSSHAG00000012866	-	73	47.573	ENSMZEG00005012096	-	99	42.321	Maylandia_zebra
ENSSHAG00000012866	-	99	44.444	ENSMMOG00000007032	-	98	43.346	Mola_mola
ENSSHAG00000012866	-	99	53.731	ENSMMOG00000012458	alyref	96	56.296	Mola_mola
ENSSHAG00000012866	-	100	43.431	ENSMALG00000006054	-	99	40.351	Monopterus_albus
ENSSHAG00000012866	-	98	50.566	ENSMLUG00000009247	-	98	52.075	Myotis_lucifugus
ENSSHAG00000012866	-	99	53.435	ENSMLUG00000006521	-	99	60.687	Myotis_lucifugus
ENSSHAG00000012866	-	99	54.924	ENSMLUG00000014372	-	99	61.742	Myotis_lucifugus
ENSSHAG00000012866	-	76	55.941	ENSMLUG00000028605	-	99	49.818	Myotis_lucifugus
ENSSHAG00000012866	-	99	56.154	ENSMLUG00000004098	-	99	62.308	Myotis_lucifugus
ENSSHAG00000012866	-	98	51.880	ENSMLUG00000022178	-	98	51.661	Myotis_lucifugus
ENSSHAG00000012866	-	98	47.500	ENSMLUG00000022467	-	99	50.725	Myotis_lucifugus
ENSSHAG00000012866	-	79	54.950	ENSMLUG00000030671	-	98	53.759	Myotis_lucifugus
ENSSHAG00000012866	-	99	64.062	ENSNGAG00000022014	-	99	64.706	Nannospalax_galili
ENSSHAG00000012866	-	99	52.364	ENSNBRG00000001747	alyref	99	55.273	Neolamprologus_brichardi
ENSSHAG00000012866	-	72	47.549	ENSNBRG00000017460	-	99	44.014	Neolamprologus_brichardi
ENSSHAG00000012866	-	99	52.878	ENSONIG00000019434	alyref	99	54.676	Oreochromis_niloticus
ENSSHAG00000012866	-	73	48.990	ENSONIG00000003296	-	99	44.681	Oreochromis_niloticus
ENSSHAG00000012866	-	99	36.102	ENSORLG00000001620	-	58	43.396	Oryzias_latipes
ENSSHAG00000012866	-	99	51.825	ENSORLG00020011942	alyref	99	55.556	Oryzias_latipes_hni
ENSSHAG00000012866	-	100	39.502	ENSORLG00020015673	-	99	43.011	Oryzias_latipes_hni
ENSSHAG00000012866	-	99	52.206	ENSORLG00015022664	alyref	99	55.597	Oryzias_latipes_hsok
ENSSHAG00000012866	-	100	40.502	ENSORLG00015015143	-	99	44.128	Oryzias_latipes_hsok
ENSSHAG00000012866	-	99	54.851	ENSOMEG00000019176	alyref	99	56.716	Oryzias_melastigma
ENSSHAG00000012866	-	99	41.697	ENSOMEG00000007158	-	97	41.007	Oryzias_melastigma
ENSSHAG00000012866	-	69	70.787	ENSPPAG00000036403	-	68	71.910	Pan_paniscus
ENSSHAG00000012866	-	99	56.371	ENSPKIG00000006233	-	80	59.004	Paramormyrops_kingsleyae
ENSSHAG00000012866	-	78	62.245	ENSPKIG00000007070	alyref	99	56.977	Paramormyrops_kingsleyae
ENSSHAG00000012866	-	73	43.316	ENSPMGG00000012994	-	98	43.316	Periophthalmus_magnuspinnatus
ENSSHAG00000012866	-	77	56.190	ENSPMGG00000016600	alyref	90	55.019	Periophthalmus_magnuspinnatus
ENSSHAG00000012866	-	99	60.236	ENSPEMG00000016628	-	99	60.000	Peromyscus_maniculatus_bairdii
ENSSHAG00000012866	-	100	40.377	ENSPFOG00000017094	-	99	42.545	Poecilia_formosa
ENSSHAG00000012866	-	78	58.252	ENSPFOG00000022825	alyref	98	53.818	Poecilia_formosa
ENSSHAG00000012866	-	100	40.377	ENSPLAG00000014380	-	99	42.545	Poecilia_latipinna
ENSSHAG00000012866	-	78	58.252	ENSPLAG00000006948	alyref	99	54.015	Poecilia_latipinna
ENSSHAG00000012866	-	100	40.377	ENSPMEG00000023039	-	99	42.545	Poecilia_mexicana
ENSSHAG00000012866	-	78	58.252	ENSPMEG00000003547	alyref	99	53.818	Poecilia_mexicana
ENSSHAG00000012866	-	78	58.252	ENSPREG00000015795	alyref	99	53.650	Poecilia_reticulata
ENSSHAG00000012866	-	99	41.445	ENSPREG00000003649	-	99	40.283	Poecilia_reticulata
ENSSHAG00000012866	-	98	41.155	ENSPNYG00000002879	-	98	41.980	Pundamilia_nyererei
ENSSHAG00000012866	-	99	51.648	ENSPNYG00000017498	alyref	99	55.678	Pundamilia_nyererei
ENSSHAG00000012866	-	78	58.852	ENSPNAG00000002531	alyref	99	55.882	Pygocentrus_nattereri
ENSSHAG00000012866	-	72	68.817	ENSSBOG00000030924	-	86	68.817	Saimiri_boliviensis_boliviensis
ENSSHAG00000012866	-	69	65.385	ENSSFOG00015003678	alyref	83	65.385	Scleropages_formosus
ENSSHAG00000012866	-	78	62.687	ENSSFOG00015003923	alyref	73	65.196	Scleropages_formosus
ENSSHAG00000012866	-	100	42.125	ENSSMAG00000011169	-	100	46.154	Scophthalmus_maximus
ENSSHAG00000012866	-	99	53.480	ENSSMAG00000009283	alyref	99	55.396	Scophthalmus_maximus
ENSSHAG00000012866	-	99	52.574	ENSSDUG00000016158	alyref	99	55.273	Seriola_dumerili
ENSSHAG00000012866	-	99	51.648	ENSSLDG00000017803	alyref	99	54.909	Seriola_lalandi_dorsalis
ENSSHAG00000012866	-	99	45.000	ENSSPAG00000017028	-	96	46.154	Stegastes_partitus
ENSSHAG00000012866	-	99	42.481	ENSTRUG00000003051	-	99	44.280	Takifugu_rubripes
ENSSHAG00000012866	-	99	47.036	ENSTNIG00000014136	-	99	45.560	Tetraodon_nigroviridis
ENSSHAG00000012866	-	99	48.507	ENSTNIG00000011595	alyref	99	50.549	Tetraodon_nigroviridis
ENSSHAG00000012866	-	69	64.444	ENSVVUG00000000272	-	82	71.667	Vulpes_vulpes
ENSSHAG00000012866	-	77	58.824	ENSXCOG00000018047	alyref	98	53.846	Xiphophorus_couchianus
ENSSHAG00000012866	-	100	40.530	ENSXMAG00000018086	-	99	41.852	Xiphophorus_maculatus
ENSSHAG00000012866	-	77	58.824	ENSXMAG00000012218	alyref	98	53.846	Xiphophorus_maculatus