EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000012878 (Gene tree)
Gene ID: 100929635
Gene Symbol: TGS1
Alias: NCOA6IP|PIMT
Full Name: trimethylguanosine synthase 1
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 52796 bases
Position: chrGL841257.1:1124314-1177109
Accession: 17843
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000015090	Methyltransf_15	PF09445.10	8.1e-44	1	1
ENSSHAP00000015091	Methyltransf_15	PF09445.10	1.1e-31	1	1
ENSSHAP00000015091	UPF0020	PF01170.18	1.9e-06	1	1
ENSSHAP00000015090	UPF0020	PF01170.18	2.2e-06	1	1
ENSSHAP00000015090	Met_10	PF02475.16	5.6e-07	1	1
ENSSHAP00000015091	Met_10	PF02475.16	6.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000015217	TGS1-202	2391	-	ENSSHAP00000015091	796 (aa)	-	G3WI36
ENSSHAT00000015216	TGS1-201	2619	-	ENSSHAP00000015090	873 (aa)	-	G3WI35

Gene Model

Click here to download ENSSHAG00000012878's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000012878's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000012878	TGS1	99	65.212	ENSG00000137574	TGS1	99	64.638	Homo_sapiens
ENSSHAG00000012878	TGS1	65	37.954	ENSAPOG00000004321	-	99	38.284	Acanthochromis_polyacanthus
ENSSHAG00000012878	TGS1	99	68.366	ENSAMEG00000001781	TGS1	99	67.787	Ailuropoda_melanoleuca
ENSSHAG00000012878	TGS1	96	36.108	ENSAOCG00000022799	lyn	97	36.108	Amphiprion_ocellaris
ENSSHAG00000012878	TGS1	75	37.902	ENSAPEG00000019723	TGS1	96	38.691	Amphiprion_percula
ENSSHAG00000012878	TGS1	99	35.653	ENSATEG00000005927	lyn	91	36.199	Anabas_testudineus
ENSSHAG00000012878	TGS1	80	51.613	ENSAPLG00000006073	-	100	52.401	Anas_platyrhynchos
ENSSHAG00000012878	TGS1	98	50.937	ENSACAG00000017988	TGS1	92	51.378	Anolis_carolinensis
ENSSHAG00000012878	TGS1	99	58.708	ENSANAG00000035525	TGS1	100	57.785	Aotus_nancymaae
ENSSHAG00000012878	TGS1	97	37.850	ENSACLG00000000261	lyn	99	38.787	Astatotilapia_calliptera
ENSSHAG00000012878	TGS1	97	40.519	ENSAMXG00000014086	lyn	98	41.461	Astyanax_mexicanus
ENSSHAG00000012878	TGS1	99	61.574	ENSBTAG00000005898	TGS1	99	61.806	Bos_taurus
ENSSHAG00000012878	TGS1	99	64.360	ENSCJAG00000016657	TGS1	98	64.014	Callithrix_jacchus
ENSSHAG00000012878	TGS1	99	67.903	ENSCAFG00000007011	TGS1	99	67.514	Canis_familiaris
ENSSHAG00000012878	TGS1	99	66.860	ENSCAFG00020015485	TGS1	99	66.474	Canis_lupus_dingo
ENSSHAG00000012878	TGS1	99	61.227	ENSCHIG00000013976	TGS1	99	61.458	Capra_hircus
ENSSHAG00000012878	TGS1	99	65.398	ENSTSYG00000000171	TGS1	99	65.167	Carlito_syrichta
ENSSHAG00000012878	TGS1	95	56.884	ENSCAPG00000013732	TGS1	99	56.522	Cavia_aperea
ENSSHAG00000012878	TGS1	99	60.834	ENSCPOG00000009713	TGS1	99	60.487	Cavia_porcellus
ENSSHAG00000012878	TGS1	99	64.862	ENSCCAG00000030476	TGS1	99	64.286	Cebus_capucinus
ENSSHAG00000012878	TGS1	99	65.252	ENSCATG00000035375	TGS1	99	64.908	Cercocebus_atys
ENSSHAG00000012878	TGS1	99	62.558	ENSCLAG00000009468	TGS1	99	62.212	Chinchilla_lanigera
ENSSHAG00000012878	TGS1	100	63.648	ENSCSAG00000014611	TGS1	99	63.027	Chlorocebus_sabaeus
ENSSHAG00000012878	TGS1	99	65.543	ENSCHOG00000001462	TGS1	99	63.510	Choloepus_hoffmanni
ENSSHAG00000012878	TGS1	98	58.014	ENSCPBG00000004958	TGS1	99	59.142	Chrysemys_picta_bellii
ENSSHAG00000012878	TGS1	99	64.753	ENSCANG00000041389	TGS1	99	64.179	Colobus_angolensis_palliatus
ENSSHAG00000012878	TGS1	99	60.230	ENSCGRG00001019470	Tgs1	100	59.885	Cricetulus_griseus_chok1gshd
ENSSHAG00000012878	TGS1	99	61.149	ENSCGRG00000008981	Tgs1	100	60.805	Cricetulus_griseus_crigri
ENSSHAG00000012878	TGS1	97	38.176	ENSDARG00000107511	lyn	99	74.586	Danio_rerio
ENSSHAG00000012878	TGS1	99	66.012	ENSDNOG00000008353	TGS1	99	65.665	Dasypus_novemcinctus
ENSSHAG00000012878	TGS1	99	63.206	ENSDORG00000012484	Tgs1	99	62.860	Dipodomys_ordii
ENSSHAG00000012878	TGS1	84	64.602	ENSETEG00000005126	TGS1	85	62.727	Echinops_telfairi
ENSSHAG00000012878	TGS1	100	66.874	ENSEASG00005016371	TGS1	95	66.625	Equus_asinus_asinus
ENSSHAG00000012878	TGS1	99	67.783	ENSECAG00000019399	TGS1	99	67.552	Equus_caballus
ENSSHAG00000012878	TGS1	69	93.333	ENSEEUG00000001735	TGS1	71	93.333	Erinaceus_europaeus
ENSSHAG00000012878	TGS1	98	39.363	ENSELUG00000012537	lyn	99	39.843	Esox_lucius
ENSSHAG00000012878	TGS1	99	67.940	ENSFCAG00000011478	TGS1	99	67.746	Felis_catus
ENSSHAG00000012878	TGS1	88	49.197	ENSFALG00000010249	TGS1	99	50.000	Ficedula_albicollis
ENSSHAG00000012878	TGS1	99	63.963	ENSFDAG00000011405	TGS1	99	63.847	Fukomys_damarensis
ENSSHAG00000012878	TGS1	97	52.189	ENSGALG00000015340	TGS1	99	51.852	Gallus_gallus
ENSSHAG00000012878	TGS1	98	57.971	ENSGAGG00000019590	TGS1	99	58.194	Gopherus_agassizii
ENSSHAG00000012878	TGS1	99	65.478	ENSGGOG00000008624	TGS1	99	64.902	Gorilla_gorilla
ENSSHAG00000012878	TGS1	73	37.361	ENSHBUG00000003518	lyn	98	38.799	Haplochromis_burtoni
ENSSHAG00000012878	TGS1	75	89.831	ENSHGLG00000000284	TGS1	89	89.831	Heterocephalus_glaber_female
ENSSHAG00000012878	TGS1	99	36.914	ENSHCOG00000014161	lyn	99	39.171	Hippocampus_comes
ENSSHAG00000012878	TGS1	98	34.499	ENSIPUG00000002294	tgs1	98	38.989	Ictalurus_punctatus
ENSSHAG00000012878	TGS1	99	65.896	ENSSTOG00000009597	TGS1	99	65.783	Ictidomys_tridecemlineatus
ENSSHAG00000012878	TGS1	100	59.352	ENSJJAG00000016239	Tgs1	100	60.255	Jaculus_jaculus
ENSSHAG00000012878	TGS1	97	36.895	ENSKMAG00000019371	-	99	36.558	Kryptolebias_marmoratus
ENSSHAG00000012878	TGS1	97	37.642	ENSLBEG00000027341	-	98	37.429	Labrus_bergylta
ENSSHAG00000012878	TGS1	100	45.923	ENSLACG00000008074	TGS1	100	48.539	Latimeria_chalumnae
ENSSHAG00000012878	TGS1	98	43.693	ENSLOCG00000005492	lyn	99	43.814	Lepisosteus_oculatus
ENSSHAG00000012878	TGS1	99	62.255	ENSLAFG00000015386	TGS1	100	62.299	Loxodonta_africana
ENSSHAG00000012878	TGS1	99	64.902	ENSMFAG00000029838	TGS1	99	64.212	Macaca_fascicularis
ENSSHAG00000012878	TGS1	100	63.524	ENSMMUG00000005478	TGS1	99	63.751	Macaca_mulatta
ENSSHAG00000012878	TGS1	99	64.902	ENSMNEG00000023719	TGS1	99	64.212	Macaca_nemestrina
ENSSHAG00000012878	TGS1	99	65.017	ENSMLEG00000034807	TGS1	99	64.672	Mandrillus_leucophaeus
ENSSHAG00000012878	TGS1	97	37.528	ENSMAMG00000009542	TGS1	99	38.020	Mastacembelus_armatus
ENSSHAG00000012878	TGS1	97	37.962	ENSMZEG00005015681	lyn	99	38.902	Maylandia_zebra
ENSSHAG00000012878	TGS1	83	50.526	ENSMGAG00000010966	TGS1	94	50.811	Meleagris_gallopavo
ENSSHAG00000012878	TGS1	99	62.529	ENSMAUG00000009875	Tgs1	100	61.839	Mesocricetus_auratus
ENSSHAG00000012878	TGS1	99	66.474	ENSMICG00000011199	TGS1	99	66.127	Microcebus_murinus
ENSSHAG00000012878	TGS1	98	60.023	ENSMOCG00000019560	Tgs1	99	59.560	Microtus_ochrogaster
ENSSHAG00000012878	TGS1	58	46.507	ENSMMOG00000021495	lyn	53	69.369	Mola_mola
ENSSHAG00000012878	TGS1	87	85.884	ENSMODG00000009174	TGS1	99	85.884	Monodelphis_domestica
ENSSHAG00000012878	TGS1	75	40.486	ENSMALG00000021440	lyn	99	38.054	Monopterus_albus
ENSSHAG00000012878	TGS1	98	60.325	MGP_CAROLIEiJ_G0025779	-	99	59.629	Mus_caroli
ENSSHAG00000012878	TGS1	100	54.613	MGP_CAROLIEiJ_G0025780	-	98	53.432	Mus_caroli
ENSSHAG00000012878	TGS1	98	60.093	ENSMUSG00000028233	Tgs1	99	59.397	Mus_musculus
ENSSHAG00000012878	TGS1	100	54.712	MGP_PahariEiJ_G0023902	-	98	53.986	Mus_pahari
ENSSHAG00000012878	TGS1	98	60.162	MGP_PahariEiJ_G0023901	-	99	59.700	Mus_pahari
ENSSHAG00000012878	TGS1	54	91.083	MGP_SPRETEiJ_G0026726	-	86	90.566	Mus_spretus
ENSSHAG00000012878	TGS1	98	60.487	MGP_SPRETEiJ_G0026727	-	99	59.791	Mus_spretus
ENSSHAG00000012878	TGS1	100	66.625	ENSMPUG00000010475	TGS1	99	66.085	Mustela_putorius_furo
ENSSHAG00000012878	TGS1	99	66.204	ENSMLUG00000014857	TGS1	99	65.856	Myotis_lucifugus
ENSSHAG00000012878	TGS1	99	62.601	ENSNGAG00000019532	Tgs1	100	62.255	Nannospalax_galili
ENSSHAG00000012878	TGS1	99	65.593	ENSNLEG00000001101	TGS1	99	65.017	Nomascus_leucogenys
ENSSHAG00000012878	TGS1	92	82.214	ENSMEUG00000001697	TGS1	100	82.214	Notamacropus_eugenii
ENSSHAG00000012878	TGS1	96	55.744	ENSODEG00000002948	TGS1	100	55.808	Octodon_degus
ENSSHAG00000012878	TGS1	76	40.142	ENSONIG00000006339	lyn	95	41.250	Oreochromis_niloticus
ENSSHAG00000012878	TGS1	89	64.232	ENSOANG00000021853	TGS1	99	64.232	Ornithorhynchus_anatinus
ENSSHAG00000012878	TGS1	99	63.857	ENSOCUG00000017522	TGS1	99	63.353	Oryctolagus_cuniculus
ENSSHAG00000012878	TGS1	66	66.535	ENSORLG00000004299	lyn	95	36.333	Oryzias_latipes
ENSSHAG00000012878	TGS1	98	34.894	ENSORLG00020004200	lyn	95	35.746	Oryzias_latipes_hni
ENSSHAG00000012878	TGS1	75	39.941	ENSORLG00015007251	lyn	96	37.454	Oryzias_latipes_hsok
ENSSHAG00000012878	TGS1	75	40.735	ENSOMEG00000020174	lyn	98	37.188	Oryzias_melastigma
ENSSHAG00000012878	TGS1	99	64.064	ENSOGAG00000012572	TGS1	99	63.835	Otolemur_garnettii
ENSSHAG00000012878	TGS1	99	60.784	ENSOARG00000014613	TGS1	99	61.015	Ovis_aries
ENSSHAG00000012878	TGS1	99	65.593	ENSPPAG00000039058	TGS1	99	65.017	Pan_paniscus
ENSSHAG00000012878	TGS1	99	67.552	ENSPPRG00000000677	TGS1	99	67.052	Panthera_pardus
ENSSHAG00000012878	TGS1	99	67.667	ENSPTIG00000005122	TGS1	99	67.168	Panthera_tigris_altaica
ENSSHAG00000012878	TGS1	99	65.786	ENSPTRG00000020262	TGS1	99	65.212	Pan_troglodytes
ENSSHAG00000012878	TGS1	99	65.017	ENSPANG00000018910	TGS1	99	64.557	Papio_anubis
ENSSHAG00000012878	TGS1	76	42.206	ENSPKIG00000005454	lyn	78	42.625	Paramormyrops_kingsleyae
ENSSHAG00000012878	TGS1	98	57.735	ENSPSIG00000014983	TGS1	99	58.296	Pelodiscus_sinensis
ENSSHAG00000012878	TGS1	57	66.946	ENSPMGG00000012711	lyn	68	55.521	Periophthalmus_magnuspinnatus
ENSSHAG00000012878	TGS1	99	61.220	ENSPEMG00000007957	Tgs1	100	60.990	Peromyscus_maniculatus_bairdii
ENSSHAG00000012878	TGS1	100	88.330	ENSPCIG00000016232	TGS1	100	88.330	Phascolarctos_cinereus
ENSSHAG00000012878	TGS1	75	40.117	ENSPFOG00000001545	-	99	40.117	Poecilia_formosa
ENSSHAG00000012878	TGS1	99	33.012	ENSPREG00000012261	-	99	33.091	Poecilia_reticulata
ENSSHAG00000012878	TGS1	99	65.629	ENSPPYG00000018597	TGS1	99	65.052	Pongo_abelii
ENSSHAG00000012878	TGS1	99	62.976	ENSPCAG00000000143	TGS1	99	62.630	Procavia_capensis
ENSSHAG00000012878	TGS1	99	66.243	ENSPCOG00000013537	TGS1	99	65.896	Propithecus_coquereli
ENSSHAG00000012878	TGS1	99	61.414	ENSPVAG00000016399	TGS1	99	61.066	Pteropus_vampyrus
ENSSHAG00000012878	TGS1	75	41.320	ENSPNYG00000023004	lyn	87	39.601	Pundamilia_nyererei
ENSSHAG00000012878	TGS1	98	40.807	ENSPNAG00000022249	lyn	99	40.157	Pygocentrus_nattereri
ENSSHAG00000012878	TGS1	98	60.834	ENSRNOG00000008156	Tgs1	99	60.603	Rattus_norvegicus
ENSSHAG00000012878	TGS1	100	62.283	ENSRBIG00000041893	TGS1	99	62.874	Rhinopithecus_bieti
ENSSHAG00000012878	TGS1	99	65.132	ENSRROG00000035127	TGS1	99	64.672	Rhinopithecus_roxellana
ENSSHAG00000012878	TGS1	100	63.817	ENSSBOG00000024469	TGS1	99	63.505	Saimiri_boliviensis_boliviensis
ENSSHAG00000012878	TGS1	95	38.373	ENSSFOG00015001308	tgs1	96	38.902	Scleropages_formosus
ENSSHAG00000012878	TGS1	79	39.680	ENSSMAG00000019469	lyn	96	38.279	Scophthalmus_maximus
ENSSHAG00000012878	TGS1	97	33.415	ENSSPAG00000002170	lyn	94	36.461	Stegastes_partitus
ENSSHAG00000012878	TGS1	97	60.742	ENSSSCG00000006251	TGS1	98	60.358	Sus_scrofa
ENSSHAG00000012878	TGS1	97	49.810	ENSTGUG00000011050	TGS1	100	51.821	Taeniopygia_guttata
ENSSHAG00000012878	TGS1	55	66.495	ENSTRUG00000009532	lyn	72	63.889	Takifugu_rubripes
ENSSHAG00000012878	TGS1	88	38.319	ENSTNIG00000018133	lyn	79	65.441	Tetraodon_nigroviridis
ENSSHAG00000012878	TGS1	84	93.443	ENSTBEG00000010953	TGS1	85	93.443	Tupaia_belangeri
ENSSHAG00000012878	TGS1	99	59.815	ENSTTRG00000017239	TGS1	99	59.584	Tursiops_truncatus
ENSSHAG00000012878	TGS1	99	66.821	ENSUAMG00000027718	TGS1	99	66.127	Ursus_americanus
ENSSHAG00000012878	TGS1	100	66.334	ENSUMAG00000009761	TGS1	99	65.586	Ursus_maritimus
ENSSHAG00000012878	TGS1	83	57.497	ENSVPAG00000001166	TGS1	88	57.772	Vicugna_pacos
ENSSHAG00000012878	TGS1	100	66.125	ENSVVUG00000017821	TGS1	99	65.586	Vulpes_vulpes
ENSSHAG00000012878	TGS1	98	47.582	ENSXETG00000005648	tgs1	99	47.699	Xenopus_tropicalis