EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000012932 (Gene tree)
Gene ID: 100923028
Gene Symbol: RBM23
Alias: CAPERbeta|FLJ10482|RNPC4
Full Name: RNA binding motif protein 23
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 5680 bases
Position: chrGL834496.1:1134671-1140350
Accession: 100923028
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000015159	RRM_1	PF00076.22	1.1e-34	1	2
ENSSHAP00000015159	RRM_1	PF00076.22	1.1e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000015285	RBM23-201	1362	XM_023499256	ENSSHAP00000015159	453 (aa)	XP_023355024	G3WIA4

Gene Model

Click here to download ENSSHAG00000012932's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000012932's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000012932	RBM23	65	71.429	ENSSHAG00000018608	RBM39	59	70.253

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000012932	RBM23	100	86.681	ENSG00000100461	RBM23	100	100.000	Homo_sapiens
ENSSHAG00000012932	RBM23	100	83.983	ENSAMEG00000007322	RBM23	71	91.875	Ailuropoda_melanoleuca
ENSSHAG00000012932	RBM23	70	85.093	ENSACAG00000001569	RBM23	67	85.127	Anolis_carolinensis
ENSSHAG00000012932	RBM23	100	66.004	ENSANAG00000033790	-	72	75.563	Aotus_nancymaae
ENSSHAG00000012932	RBM23	100	84.731	ENSBTAG00000038333	RBM23	69	90.000	Bos_taurus
ENSSHAG00000012932	RBM23	100	84.532	ENSCJAG00000008482	RBM23	71	89.905	Callithrix_jacchus
ENSSHAG00000012932	RBM23	100	79.783	ENSCAFG00000011217	RBM23	73	86.751	Canis_familiaris
ENSSHAG00000012932	RBM23	100	84.934	ENSCAFG00020007711	RBM23	71	93.671	Canis_lupus_dingo
ENSSHAG00000012932	RBM23	100	86.452	ENSCHIG00000025709	RBM23	69	90.938	Capra_hircus
ENSSHAG00000012932	RBM23	100	85.526	ENSTSYG00000014755	RBM23	100	92.279	Carlito_syrichta
ENSSHAG00000012932	RBM23	100	82.751	ENSCCAG00000025114	-	74	92.405	Cebus_capucinus
ENSSHAG00000012932	RBM23	100	72.026	ENSCCAG00000028584	-	100	79.182	Cebus_capucinus
ENSSHAG00000012932	RBM23	100	85.808	ENSCATG00000017832	RBM23	100	90.000	Cercocebus_atys
ENSSHAG00000012932	RBM23	100	83.478	ENSCSAG00000016213	RBM23	71	90.566	Chlorocebus_sabaeus
ENSSHAG00000012932	RBM23	68	83.226	ENSCPBG00000026096	RBM23	76	84.516	Chrysemys_picta_bellii
ENSSHAG00000012932	RBM23	74	90.882	ENSCANG00000001893	RBM23	77	91.798	Colobus_angolensis_palliatus
ENSSHAG00000012932	RBM23	100	87.859	ENSDNOG00000032457	RBM23	71	90.997	Dasypus_novemcinctus
ENSSHAG00000012932	RBM23	59	92.336	ENSDORG00000004926	-	100	91.606	Dipodomys_ordii
ENSSHAG00000012932	RBM23	54	80.000	ENSETEG00000017915	-	87	80.000	Echinops_telfairi
ENSSHAG00000012932	RBM23	96	83.409	ENSEASG00005011696	RBM23	70	92.381	Equus_asinus_asinus
ENSSHAG00000012932	RBM23	69	89.655	ENSECAG00000009910	RBM23	69	92.881	Equus_caballus
ENSSHAG00000012932	RBM23	100	82.969	ENSEEUG00000015560	RBM23	71	87.975	Erinaceus_europaeus
ENSSHAG00000012932	RBM23	69	94.322	ENSFCAG00000006632	RBM23	74	93.671	Felis_catus
ENSSHAG00000012932	RBM23	100	86.842	ENSGGOG00000015707	RBM23	73	92.357	Gorilla_gorilla
ENSSHAG00000012932	RBM23	100	79.691	ENSHGLG00100006114	RBM23	70	87.419	Heterocephalus_glaber_male
ENSSHAG00000012932	RBM23	59	92.674	ENSSTOG00000010354	RBM23	100	91.209	Ictidomys_tridecemlineatus
ENSSHAG00000012932	RBM23	100	80.568	ENSLAFG00000018567	RBM23	73	89.241	Loxodonta_africana
ENSSHAG00000012932	RBM23	100	85.870	ENSMFAG00000037595	RBM23	73	91.509	Macaca_fascicularis
ENSSHAG00000012932	RBM23	100	85.652	ENSMMUG00000018381	RBM23	74	91.509	Macaca_mulatta
ENSSHAG00000012932	RBM23	100	86.214	ENSMNEG00000042442	RBM23	73	92.063	Macaca_nemestrina
ENSSHAG00000012932	RBM23	100	75.108	ENSMLEG00000039954	RBM23	73	86.875	Mandrillus_leucophaeus
ENSSHAG00000012932	RBM23	100	88.300	ENSMICG00000006364	RBM23	100	94.052	Microcebus_murinus
ENSSHAG00000012932	RBM23	100	98.455	ENSMODG00000024448	RBM23	100	98.455	Monodelphis_domestica
ENSSHAG00000012932	RBM23	100	83.660	ENSMPUG00000007151	RBM23	71	93.375	Mustela_putorius_furo
ENSSHAG00000012932	RBM23	100	78.384	ENSMLUG00000012923	RBM23	71	87.261	Myotis_lucifugus
ENSSHAG00000012932	RBM23	100	86.117	ENSNLEG00000014792	RBM23	74	91.223	Nomascus_leucogenys
ENSSHAG00000012932	RBM23	61	100.000	ENSMEUG00000014548	-	60	100.000	Notamacropus_eugenii
ENSSHAG00000012932	RBM23	70	88.088	ENSOPRG00000001092	RBM23	71	86.581	Ochotona_princeps
ENSSHAG00000012932	RBM23	72	57.099	ENSOANG00000008908	-	100	56.481	Ornithorhynchus_anatinus
ENSSHAG00000012932	RBM23	69	92.063	ENSOCUG00000002006	RBM23	100	83.772	Oryctolagus_cuniculus
ENSSHAG00000012932	RBM23	70	88.182	ENSOGAG00000014794	RBM23	75	87.385	Otolemur_garnettii
ENSSHAG00000012932	RBM23	100	85.376	ENSOARG00000019398	RBM23	69	89.688	Ovis_aries
ENSSHAG00000012932	RBM23	100	86.985	ENSPPAG00000037922	RBM23	74	90.596	Pan_paniscus
ENSSHAG00000012932	RBM23	69	94.322	ENSPPRG00000023344	RBM23	74	93.671	Panthera_pardus
ENSSHAG00000012932	RBM23	69	94.322	ENSPTIG00000007831	RBM23	74	93.671	Panthera_tigris_altaica
ENSSHAG00000012932	RBM23	100	85.900	ENSPTRG00000006151	RBM23	74	89.969	Pan_troglodytes
ENSSHAG00000012932	RBM23	97	81.696	ENSPANG00000001324	RBM23	100	90.975	Papio_anubis
ENSSHAG00000012932	RBM23	100	98.462	ENSPCIG00000027773	RBM23	100	98.462	Phascolarctos_cinereus
ENSSHAG00000012932	RBM23	70	93.146	ENSPPYG00000005649	RBM23	74	92.089	Pongo_abelii
ENSSHAG00000012932	RBM23	100	63.736	ENSPCAG00000006669	RBM23	74	74.760	Procavia_capensis
ENSSHAG00000012932	RBM23	100	88.377	ENSPCOG00000018564	RBM23	100	91.912	Propithecus_coquereli
ENSSHAG00000012932	RBM23	100	84.141	ENSPVAG00000013785	RBM23	71	93.891	Pteropus_vampyrus
ENSSHAG00000012932	RBM23	100	85.435	ENSRBIG00000039276	RBM23	73	91.509	Rhinopithecus_bieti
ENSSHAG00000012932	RBM23	100	85.435	ENSRROG00000044026	RBM23	73	91.509	Rhinopithecus_roxellana
ENSSHAG00000012932	RBM23	96	66.133	ENSSBOG00000034977	-	73	74.237	Saimiri_boliviensis_boliviensis
ENSSHAG00000012932	RBM23	100	84.969	ENSSBOG00000023037	-	69	71.704	Saimiri_boliviensis_boliviensis
ENSSHAG00000012932	RBM23	100	81.304	ENSSARG00000005165	RBM23	71	88.365	Sorex_araneus
ENSSHAG00000012932	RBM23	70	82.500	ENSSPUG00000000489	RBM23	69	83.548	Sphenodon_punctatus
ENSSHAG00000012932	RBM23	100	86.813	ENSSSCG00000026700	RBM23	73	94.569	Sus_scrofa
ENSSHAG00000012932	RBM23	100	78.834	ENSTBEG00000011543	RBM23	69	85.981	Tupaia_belangeri
ENSSHAG00000012932	RBM23	100	87.417	ENSTTRG00000001500	RBM23	71	95.498	Tursiops_truncatus
ENSSHAG00000012932	RBM23	100	85.153	ENSUAMG00000008524	RBM23	71	93.038	Ursus_americanus
ENSSHAG00000012932	RBM23	100	85.153	ENSUMAG00000014075	RBM23	71	93.038	Ursus_maritimus
ENSSHAG00000012932	RBM23	100	84.934	ENSVVUG00000019815	RBM23	71	93.671	Vulpes_vulpes
ENSSHAG00000012932	RBM23	66	78.073	ENSXETG00000022623	rbm23	71	76.677	Xenopus_tropicalis