EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000013051 (Gene tree)
Gene ID: 100934047
Gene Symbol: RNASEH1
Alias: -
Full Name: ribonuclease H1
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 27059 bases
Position: chrGL834693.1:1153587-1180645
Accession: 100934047
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000015311	RNase_H	PF00075.24	3.8e-44	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000015438	RNASEH1-201	4150	XM_003757897	ENSSHAP00000015311	289 (aa)	XP_003757945	G3WIQ6

Gene Model

Click here to download ENSSHAG00000013051's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000013051's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000013051	RNASEH1	89	71.374	ENSG00000171865	RNASEH1	92	71.374	Homo_sapiens
ENSSHAG00000013051	RNASEH1	98	53.378	ENSAPOG00000000412	rnaseh1	98	52.862	Acanthochromis_polyacanthus
ENSSHAG00000013051	RNASEH1	89	74.905	ENSAMEG00000018433	RNASEH1	100	70.139	Ailuropoda_melanoleuca
ENSSHAG00000013051	RNASEH1	97	53.287	ENSACIG00000014666	rnaseh1	96	53.633	Amphilophus_citrinellus
ENSSHAG00000013051	RNASEH1	97	54.762	ENSAOCG00000015210	rnaseh1	97	53.898	Amphiprion_ocellaris
ENSSHAG00000013051	RNASEH1	97	55.102	ENSAPEG00000014104	rnaseh1	97	54.237	Amphiprion_percula
ENSSHAG00000013051	RNASEH1	97	51.525	ENSATEG00000000598	rnaseh1	95	54.779	Anabas_testudineus
ENSSHAG00000013051	RNASEH1	83	60.938	ENSAPLG00000001961	RNASEH1	100	60.938	Anas_platyrhynchos
ENSSHAG00000013051	RNASEH1	89	52.159	ENSACAG00000016857	rnaseh1	93	52.159	Anolis_carolinensis
ENSSHAG00000013051	RNASEH1	94	69.203	ENSANAG00000024055	RNASEH1	97	69.203	Aotus_nancymaae
ENSSHAG00000013051	RNASEH1	97	50.671	ENSACLG00000006741	rnaseh1	96	51.163	Astatotilapia_calliptera
ENSSHAG00000013051	RNASEH1	96	49.104	ENSAMXG00000042940	rnaseh1	96	51.341	Astyanax_mexicanus
ENSSHAG00000013051	RNASEH1	98	68.421	ENSBTAG00000016235	RNASEH1	100	68.421	Bos_taurus
ENSSHAG00000013051	RNASEH1	89	39.098	WBGene00004382	rnh-1.0	98	39.098	Caenorhabditis_elegans
ENSSHAG00000013051	RNASEH1	94	68.929	ENSCJAG00000035450	RNASEH1	97	68.929	Callithrix_jacchus
ENSSHAG00000013051	RNASEH1	98	68.772	ENSCAFG00000003259	RNASEH1	100	68.772	Canis_familiaris
ENSSHAG00000013051	RNASEH1	53	83.117	ENSCAFG00020004994	RNASEH1	99	83.117	Canis_lupus_dingo
ENSSHAG00000013051	RNASEH1	98	68.881	ENSCHIG00000022264	-	100	68.881	Capra_hircus
ENSSHAG00000013051	RNASEH1	80	58.333	ENSCHIG00000022230	-	99	58.333	Capra_hircus
ENSSHAG00000013051	RNASEH1	99	69.759	ENSTSYG00000012926	RNASEH1	99	69.759	Carlito_syrichta
ENSSHAG00000013051	RNASEH1	83	72.951	ENSCAPG00000004813	RNASEH1	99	72.951	Cavia_aperea
ENSSHAG00000013051	RNASEH1	89	73.384	ENSCPOG00000022278	Rnaseh1	88	73.384	Cavia_porcellus
ENSSHAG00000013051	RNASEH1	98	67.820	ENSCCAG00000038017	RNASEH1	100	67.820	Cebus_capucinus
ENSSHAG00000013051	RNASEH1	96	63.406	ENSCATG00000016818	-	98	63.406	Cercocebus_atys
ENSSHAG00000013051	RNASEH1	92	70.260	ENSCATG00000016515	-	93	70.260	Cercocebus_atys
ENSSHAG00000013051	RNASEH1	99	68.966	ENSCLAG00000002440	RNASEH1	99	68.966	Chinchilla_lanigera
ENSSHAG00000013051	RNASEH1	92	69.517	ENSCSAG00000006943	RNASEH1	93	69.517	Chlorocebus_sabaeus
ENSSHAG00000013051	RNASEH1	63	79.006	ENSCHOG00000008547	RNASEH1	89	79.006	Choloepus_hoffmanni
ENSSHAG00000013051	RNASEH1	88	65.799	ENSCPBG00000021620	RNASEH1	99	65.799	Chrysemys_picta_bellii
ENSSHAG00000013051	RNASEH1	91	39.161	ENSCING00000014054	-	96	39.161	Ciona_intestinalis
ENSSHAG00000013051	RNASEH1	73	39.556	ENSCSAVG00000000009	-	96	39.556	Ciona_savignyi
ENSSHAG00000013051	RNASEH1	92	69.517	ENSCANG00000037763	RNASEH1	93	69.517	Colobus_angolensis_palliatus
ENSSHAG00000013051	RNASEH1	97	69.825	ENSCGRG00001008950	Rnaseh1	98	70.877	Cricetulus_griseus_chok1gshd
ENSSHAG00000013051	RNASEH1	97	69.825	ENSCGRG00000006029	Rnaseh1	98	70.877	Cricetulus_griseus_crigri
ENSSHAG00000013051	RNASEH1	88	54.150	ENSCSEG00000005741	rnaseh1	93	51.852	Cynoglossus_semilaevis
ENSSHAG00000013051	RNASEH1	88	56.929	ENSCVAG00000018717	rnaseh1	88	56.929	Cyprinodon_variegatus
ENSSHAG00000013051	RNASEH1	88	55.185	ENSDARG00000042571	rnaseh1	97	55.185	Danio_rerio
ENSSHAG00000013051	RNASEH1	90	74.436	ENSDNOG00000016056	RNASEH1	92	74.436	Dasypus_novemcinctus
ENSSHAG00000013051	RNASEH1	91	69.697	ENSDORG00000000704	Rnaseh1	93	69.697	Dipodomys_ordii
ENSSHAG00000013051	RNASEH1	87	36.860	FBgn0023171	rnh1	92	36.860	Drosophila_melanogaster
ENSSHAG00000013051	RNASEH1	93	69.853	ENSETEG00000012674	RNASEH1	94	69.853	Echinops_telfairi
ENSSHAG00000013051	RNASEH1	87	48.097	ENSEBUG00000008898	rnaseh1	98	48.097	Eptatretus_burgeri
ENSSHAG00000013051	RNASEH1	94	46.545	ENSEBUG00000006116	rnaseh1	82	46.545	Eptatretus_burgeri
ENSSHAG00000013051	RNASEH1	98	69.686	ENSEASG00005022200	RNASEH1	98	69.686	Equus_asinus_asinus
ENSSHAG00000013051	RNASEH1	98	69.686	ENSECAG00000020695	RNASEH1	98	69.686	Equus_caballus
ENSSHAG00000013051	RNASEH1	97	52.013	ENSELUG00000010112	rnaseh1	99	52.013	Esox_lucius
ENSSHAG00000013051	RNASEH1	98	69.474	ENSFCAG00000025832	RNASEH1	100	69.474	Felis_catus
ENSSHAG00000013051	RNASEH1	91	59.441	ENSFALG00000002069	RNASEH1	95	59.507	Ficedula_albicollis
ENSSHAG00000013051	RNASEH1	90	71.591	ENSFDAG00000002035	RNASEH1	81	71.591	Fukomys_damarensis
ENSSHAG00000013051	RNASEH1	96	55.957	ENSGMOG00000013818	rnaseh1	96	55.957	Gadus_morhua
ENSSHAG00000013051	RNASEH1	88	63.100	ENSGALG00000016389	RNASEH1	92	63.100	Gallus_gallus
ENSSHAG00000013051	RNASEH1	88	56.296	ENSGAFG00000001776	rnaseh1	90	56.296	Gambusia_affinis
ENSSHAG00000013051	RNASEH1	97	52.381	ENSGACG00000011935	rnaseh1	98	52.381	Gasterosteus_aculeatus
ENSSHAG00000013051	RNASEH1	91	60.678	ENSGAGG00000009150	RNASEH1	67	60.000	Gopherus_agassizii
ENSSHAG00000013051	RNASEH1	89	71.374	ENSGGOG00000034822	RNASEH1	92	71.374	Gorilla_gorilla
ENSSHAG00000013051	RNASEH1	97	50.671	ENSHBUG00000004666	rnaseh1	96	51.163	Haplochromis_burtoni
ENSSHAG00000013051	RNASEH1	97	68.772	ENSHGLG00000002585	Rnaseh1	90	68.772	Heterocephalus_glaber_female
ENSSHAG00000013051	RNASEH1	97	68.772	ENSHGLG00100005105	Rnaseh1	90	68.772	Heterocephalus_glaber_male
ENSSHAG00000013051	RNASEH1	98	50.820	ENSHCOG00000012329	rnaseh1	99	51.974	Hippocampus_comes
ENSSHAG00000013051	RNASEH1	98	59.011	ENSIPUG00000023060	rnaseh1	98	61.776	Ictalurus_punctatus
ENSSHAG00000013051	RNASEH1	89	72.414	ENSSTOG00000012774	RNASEH1	95	70.956	Ictidomys_tridecemlineatus
ENSSHAG00000013051	RNASEH1	92	64.552	ENSJJAG00000021481	-	93	64.552	Jaculus_jaculus
ENSSHAG00000013051	RNASEH1	85	68.293	ENSJJAG00000020238	Rnaseh1	96	68.293	Jaculus_jaculus
ENSSHAG00000013051	RNASEH1	91	57.358	ENSJJAG00000008994	-	91	57.358	Jaculus_jaculus
ENSSHAG00000013051	RNASEH1	98	53.220	ENSKMAG00000001373	rnaseh1	97	53.220	Kryptolebias_marmoratus
ENSSHAG00000013051	RNASEH1	89	53.731	ENSLBEG00000004480	rnaseh1	97	53.532	Labrus_bergylta
ENSSHAG00000013051	RNASEH1	91	54.770	ENSLACG00000007100	RNASEH1	91	55.477	Latimeria_chalumnae
ENSSHAG00000013051	RNASEH1	88	56.458	ENSLOCG00000017212	rnaseh1	97	56.827	Lepisosteus_oculatus
ENSSHAG00000013051	RNASEH1	93	73.260	ENSLAFG00000015091	RNASEH1	94	73.260	Loxodonta_africana
ENSSHAG00000013051	RNASEH1	92	70.260	ENSMFAG00000000063	-	93	70.260	Macaca_fascicularis
ENSSHAG00000013051	RNASEH1	96	63.406	ENSMFAG00000002323	-	98	63.406	Macaca_fascicularis
ENSSHAG00000013051	RNASEH1	96	64.130	ENSMMUG00000019280	-	98	64.130	Macaca_mulatta
ENSSHAG00000013051	RNASEH1	96	64.493	ENSMNEG00000029676	-	98	64.493	Macaca_nemestrina
ENSSHAG00000013051	RNASEH1	92	70.632	ENSMNEG00000040183	-	93	70.632	Macaca_nemestrina
ENSSHAG00000013051	RNASEH1	83	69.547	ENSMLEG00000039352	-	100	69.547	Mandrillus_leucophaeus
ENSSHAG00000013051	RNASEH1	96	65.942	ENSMLEG00000028662	-	98	65.942	Mandrillus_leucophaeus
ENSSHAG00000013051	RNASEH1	97	53.559	ENSMAMG00000019725	rnaseh1	94	57.090	Mastacembelus_armatus
ENSSHAG00000013051	RNASEH1	97	50.671	ENSMZEG00005013006	rnaseh1	96	51.163	Maylandia_zebra
ENSSHAG00000013051	RNASEH1	78	60.494	ENSMGAG00000013979	RNASEH1	99	60.494	Meleagris_gallopavo
ENSSHAG00000013051	RNASEH1	98	69.097	ENSMAUG00000014957	Rnaseh1	99	69.097	Mesocricetus_auratus
ENSSHAG00000013051	RNASEH1	98	70.877	ENSMICG00000033156	RNASEH1	99	70.877	Microcebus_murinus
ENSSHAG00000013051	RNASEH1	98	68.512	ENSMOCG00000015522	Rnaseh1	99	68.512	Microtus_ochrogaster
ENSSHAG00000013051	RNASEH1	96	52.414	ENSMMOG00000015902	rnaseh1	96	52.414	Mola_mola
ENSSHAG00000013051	RNASEH1	83	67.490	ENSMODG00000028814	-	98	68.050	Monodelphis_domestica
ENSSHAG00000013051	RNASEH1	99	86.713	ENSMODG00000014491	-	100	86.713	Monodelphis_domestica
ENSSHAG00000013051	RNASEH1	89	55.642	ENSMALG00000010565	rnaseh1	89	56.180	Monopterus_albus
ENSSHAG00000013051	RNASEH1	99	66.319	MGP_CAROLIEiJ_G0017660	Rnaseh1	99	66.319	Mus_caroli
ENSSHAG00000013051	RNASEH1	99	66.319	ENSMUSG00000020630	Rnaseh1	99	66.319	Mus_musculus
ENSSHAG00000013051	RNASEH1	98	66.202	MGP_PahariEiJ_G0029418	Rnaseh1	99	66.899	Mus_pahari
ENSSHAG00000013051	RNASEH1	99	66.319	MGP_SPRETEiJ_G0018502	Rnaseh1	99	66.319	Mus_spretus
ENSSHAG00000013051	RNASEH1	70	73.171	ENSMPUG00000012984	RNASEH1	98	73.171	Mustela_putorius_furo
ENSSHAG00000013051	RNASEH1	91	68.635	ENSNGAG00000015966	Rnaseh1	89	68.635	Nannospalax_galili
ENSSHAG00000013051	RNASEH1	97	51.007	ENSNBRG00000008739	rnaseh1	96	51.495	Neolamprologus_brichardi
ENSSHAG00000013051	RNASEH1	89	58.712	ENSNLEG00000015400	RNASEH1	90	58.712	Nomascus_leucogenys
ENSSHAG00000013051	RNASEH1	82	66.245	ENSNLEG00000000059	-	90	66.245	Nomascus_leucogenys
ENSSHAG00000013051	RNASEH1	97	57.651	ENSMEUG00000003610	-	99	57.651	Notamacropus_eugenii
ENSSHAG00000013051	RNASEH1	91	66.171	ENSOPRG00000005072	RNASEH1	93	66.171	Ochotona_princeps
ENSSHAG00000013051	RNASEH1	97	70.588	ENSODEG00000000235	Rnaseh1	97	70.588	Octodon_degus
ENSSHAG00000013051	RNASEH1	88	54.244	ENSONIG00000018697	rnaseh1	97	54.244	Oreochromis_niloticus
ENSSHAG00000013051	RNASEH1	89	72.243	ENSOCUG00000006117	RNASEH1	92	72.243	Oryctolagus_cuniculus
ENSSHAG00000013051	RNASEH1	89	55.390	ENSORLG00000018127	rnaseh1	96	55.390	Oryzias_latipes
ENSSHAG00000013051	RNASEH1	98	52.381	ENSORLG00020013660	rnaseh1	97	52.381	Oryzias_latipes_hni
ENSSHAG00000013051	RNASEH1	98	52.381	ENSORLG00015011338	rnaseh1	97	52.381	Oryzias_latipes_hsok
ENSSHAG00000013051	RNASEH1	79	54.202	ENSOMEG00000004710	rnaseh1	90	54.202	Oryzias_melastigma
ENSSHAG00000013051	RNASEH1	97	68.421	ENSOGAG00000017176	RNASEH1	98	68.421	Otolemur_garnettii
ENSSHAG00000013051	RNASEH1	98	59.797	ENSOARG00000005386	RNASEH1	100	59.797	Ovis_aries
ENSSHAG00000013051	RNASEH1	89	71.374	ENSPPAG00000034221	RNASEH1	92	71.374	Pan_paniscus
ENSSHAG00000013051	RNASEH1	98	69.474	ENSPPRG00000015513	RNASEH1	100	69.474	Panthera_pardus
ENSSHAG00000013051	RNASEH1	83	73.444	ENSPTIG00000019034	RNASEH1	85	73.444	Panthera_tigris_altaica
ENSSHAG00000013051	RNASEH1	81	64.463	ENSPTRG00000043403	-	92	64.463	Pan_troglodytes
ENSSHAG00000013051	RNASEH1	89	71.374	ENSPTRG00000011614	RNASEH1	92	71.374	Pan_troglodytes
ENSSHAG00000013051	RNASEH1	92	69.517	ENSPANG00000000443	RNASEH1	99	68.852	Papio_anubis
ENSSHAG00000013051	RNASEH1	96	62.319	ENSPANG00000018246	-	98	62.319	Papio_anubis
ENSSHAG00000013051	RNASEH1	89	51.661	ENSPKIG00000003146	rnaseh1	99	51.661	Paramormyrops_kingsleyae
ENSSHAG00000013051	RNASEH1	88	63.197	ENSPSIG00000002937	RNASEH1	99	63.197	Pelodiscus_sinensis
ENSSHAG00000013051	RNASEH1	87	56.972	ENSPMGG00000017463	rnaseh1	90	56.972	Periophthalmus_magnuspinnatus
ENSSHAG00000013051	RNASEH1	98	66.207	ENSPEMG00000022465	-	99	66.552	Peromyscus_maniculatus_bairdii
ENSSHAG00000013051	RNASEH1	99	86.014	ENSPCIG00000023334	-	100	86.014	Phascolarctos_cinereus
ENSSHAG00000013051	RNASEH1	52	44.371	ENSPCIG00000026047	-	85	44.371	Phascolarctos_cinereus
ENSSHAG00000013051	RNASEH1	88	55.678	ENSPFOG00000002841	rnaseh1	91	55.678	Poecilia_formosa
ENSSHAG00000013051	RNASEH1	63	48.108	ENSPLAG00000021349	-	74	48.108	Poecilia_latipinna
ENSSHAG00000013051	RNASEH1	88	55.678	ENSPMEG00000016826	rnaseh1	91	55.678	Poecilia_mexicana
ENSSHAG00000013051	RNASEH1	98	52.787	ENSPREG00000012197	rnaseh1	100	52.787	Poecilia_reticulata
ENSSHAG00000013051	RNASEH1	81	66.245	ENSPPYG00000008067	-	91	66.245	Pongo_abelii
ENSSHAG00000013051	RNASEH1	89	59.924	ENSPPYG00000025873	RNASEH1	90	59.924	Pongo_abelii
ENSSHAG00000013051	RNASEH1	97	67.361	ENSPCAG00000002500	RNASEH1	99	67.361	Procavia_capensis
ENSSHAG00000013051	RNASEH1	98	63.860	ENSPCOG00000019444	RNASEH1	99	63.860	Propithecus_coquereli
ENSSHAG00000013051	RNASEH1	98	66.667	ENSPVAG00000002070	RNASEH1	99	66.667	Pteropus_vampyrus
ENSSHAG00000013051	RNASEH1	97	50.336	ENSPNYG00000001292	rnaseh1	96	50.831	Pundamilia_nyererei
ENSSHAG00000013051	RNASEH1	98	55.172	ENSPNAG00000022344	rnaseh1	99	55.172	Pygocentrus_nattereri
ENSSHAG00000013051	RNASEH1	98	66.899	ENSRNOG00000008584	Rnaseh1	99	66.899	Rattus_norvegicus
ENSSHAG00000013051	RNASEH1	92	69.517	ENSRBIG00000034222	RNASEH1	92	69.517	Rhinopithecus_bieti
ENSSHAG00000013051	RNASEH1	92	69.888	ENSRROG00000041761	RNASEH1	92	69.888	Rhinopithecus_roxellana
ENSSHAG00000013051	RNASEH1	88	34.146	YMR234W	-	99	34.234	Saccharomyces_cerevisiae
ENSSHAG00000013051	RNASEH1	92	69.373	ENSSBOG00000025411	RNASEH1	94	69.373	Saimiri_boliviensis_boliviensis
ENSSHAG00000013051	RNASEH1	96	50.179	ENSSFOG00015002709	rnaseh1	99	50.538	Scleropages_formosus
ENSSHAG00000013051	RNASEH1	88	56.929	ENSSMAG00000007586	rnaseh1	88	56.929	Scophthalmus_maximus
ENSSHAG00000013051	RNASEH1	94	52.797	ENSSDUG00000008217	rnaseh1	94	54.478	Seriola_dumerili
ENSSHAG00000013051	RNASEH1	91	50.526	ENSSLDG00000000442	rnaseh1	94	54.762	Seriola_lalandi_dorsalis
ENSSHAG00000013051	RNASEH1	88	60.075	ENSSPUG00000006644	RNASEH1	93	60.075	Sphenodon_punctatus
ENSSHAG00000013051	RNASEH1	97	56.463	ENSSPAG00000009353	rnaseh1	97	57.143	Stegastes_partitus
ENSSHAG00000013051	RNASEH1	89	70.115	ENSSSCG00000025305	RNASEH1	99	66.316	Sus_scrofa
ENSSHAG00000013051	RNASEH1	90	59.790	ENSTGUG00000012980	RNASEH1	94	60.211	Taeniopygia_guttata
ENSSHAG00000013051	RNASEH1	88	55.556	ENSTRUG00000015774	rnaseh1	96	55.556	Takifugu_rubripes
ENSSHAG00000013051	RNASEH1	88	56.554	ENSTNIG00000010715	rnaseh1	96	56.554	Tetraodon_nigroviridis
ENSSHAG00000013051	RNASEH1	98	63.415	ENSTTRG00000001615	RNASEH1	100	63.415	Tursiops_truncatus
ENSSHAG00000013051	RNASEH1	53	83.117	ENSUAMG00000018254	RNASEH1	80	83.117	Ursus_americanus
ENSSHAG00000013051	RNASEH1	74	66.094	ENSUMAG00000003941	RNASEH1	77	66.094	Ursus_maritimus
ENSSHAG00000013051	RNASEH1	97	57.692	ENSVPAG00000011589	RNASEH1	99	57.692	Vicugna_pacos
ENSSHAG00000013051	RNASEH1	98	68.531	ENSVVUG00000008633	RNASEH1	90	68.531	Vulpes_vulpes
ENSSHAG00000013051	RNASEH1	88	47.036	ENSXETG00000030371	-	100	47.036	Xenopus_tropicalis
ENSSHAG00000013051	RNASEH1	97	54.762	ENSXETG00000001212	rnaseh1	100	55.102	Xenopus_tropicalis
ENSSHAG00000013051	RNASEH1	88	53.704	ENSXMAG00000002357	rnaseh1	90	53.704	Xiphophorus_maculatus