EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000013246 (Gene tree)
Gene ID: 100927875
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 9492 bases
Position: chrGL861610.1:1195737-1205228
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000015544	La	PF05383.17	6e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000015672	-	1026	-	ENSSHAP00000015544	342 (aa)	-	G3WJD9

Gene Model

Click here to download ENSSHAG00000013246's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000013246's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000013246	-	100	82.507	ENSG00000161813	LARP4	90	82.507	Homo_sapiens
ENSSHAG00000013246	-	81	73.741	ENSACIG00000001198	larp4aa	77	82.014	Amphilophus_citrinellus
ENSSHAG00000013246	-	78	70.412	ENSAPEG00000015441	larp4ab	72	70.412	Amphiprion_percula
ENSSHAG00000013246	-	77	66.667	ENSACLG00000000777	larp4ab	75	66.667	Astatotilapia_calliptera
ENSSHAG00000013246	-	99	82.891	ENSCJAG00000021131	LARP4	50	82.799	Callithrix_jacchus
ENSSHAG00000013246	-	99	84.956	ENSCAFG00020014554	LARP4	50	84.840	Canis_lupus_dingo
ENSSHAG00000013246	-	93	73.981	ENSCANG00000033097	-	64	73.856	Colobus_angolensis_palliatus
ENSSHAG00000013246	-	83	69.366	ENSDARG00000074979	larp4ab	79	81.295	Danio_rerio
ENSSHAG00000013246	-	100	79.009	ENSEASG00005004356	LARP4	88	79.009	Equus_asinus_asinus
ENSSHAG00000013246	-	99	84.071	ENSECAG00000012479	LARP4	51	83.965	Equus_caballus
ENSSHAG00000013246	-	99	84.366	ENSFCAG00000031897	LARP4	50	84.257	Felis_catus
ENSSHAG00000013246	-	99	84.751	ENSFALG00000002114	LARP4	52	84.840	Ficedula_albicollis
ENSSHAG00000013246	-	81	75.180	ENSGAFG00000004280	larp4aa	76	75.180	Gambusia_affinis
ENSSHAG00000013246	-	78	76.316	ENSGACG00000008381	larp4aa	72	76.316	Gasterosteus_aculeatus
ENSSHAG00000013246	-	100	82.799	ENSGGOG00000015230	LARP4	90	82.799	Gorilla_gorilla
ENSSHAG00000013246	-	99	83.776	ENSHGLG00000005513	-	52	83.673	Heterocephalus_glaber_female
ENSSHAG00000013246	-	100	79.592	ENSHGLG00000013875	-	57	79.592	Heterocephalus_glaber_female
ENSSHAG00000013246	-	98	71.676	ENSHGLG00000010979	-	81	71.676	Heterocephalus_glaber_female
ENSSHAG00000013246	-	98	71.676	ENSHGLG00100002832	-	81	71.676	Heterocephalus_glaber_male
ENSSHAG00000013246	-	69	77.966	ENSHGLG00100000622	-	68	82.639	Heterocephalus_glaber_male
ENSSHAG00000013246	-	75	63.636	ENSJJAG00000014649	-	79	84.559	Jaculus_jaculus
ENSSHAG00000013246	-	99	83.776	ENSLAFG00000005160	LARP4	56	82.769	Loxodonta_africana
ENSSHAG00000013246	-	99	83.776	ENSMFAG00000043681	LARP4	53	83.673	Macaca_fascicularis
ENSSHAG00000013246	-	99	83.776	ENSMNEG00000034602	LARP4	53	83.673	Macaca_nemestrina
ENSSHAG00000013246	-	72	78.814	ENSMNEG00000037799	-	77	69.128	Macaca_nemestrina
ENSSHAG00000013246	-	77	66.667	ENSMZEG00005007771	larp4ab	75	66.667	Maylandia_zebra
ENSSHAG00000013246	-	98	84.821	ENSMICG00000012388	-	54	84.706	Microcebus_murinus
ENSSHAG00000013246	-	97	80.781	ENSMICG00000030156	-	66	89.474	Microcebus_murinus
ENSSHAG00000013246	-	99	82.544	ENSMOCG00000020635	Larp4	51	81.924	Microtus_ochrogaster
ENSSHAG00000013246	-	73	70.968	ENSMMOG00000021861	larp4ab	75	61.011	Mola_mola
ENSSHAG00000013246	-	81	70.504	ENSMALG00000018631	larp4aa	78	79.310	Monopterus_albus
ENSSHAG00000013246	-	99	69.027	MGP_CAROLIEiJ_G0020281	Larp4	58	85.650	Mus_caroli
ENSSHAG00000013246	-	99	81.711	ENSMUSG00000023025	Larp4	55	81.633	Mus_musculus
ENSSHAG00000013246	-	99	82.301	ENSNGAG00000001577	-	51	82.216	Nannospalax_galili
ENSSHAG00000013246	-	77	66.292	ENSNBRG00000015675	larp4ab	70	74.046	Neolamprologus_brichardi
ENSSHAG00000013246	-	99	85.380	ENSOANG00000004373	LARP4	62	85.465	Ornithorhynchus_anatinus
ENSSHAG00000013246	-	78	78.148	ENSOMEG00000019749	larp4aa	73	82.734	Oryzias_melastigma
ENSSHAG00000013246	-	99	79.941	ENSOGAG00000001415	LARP4	65	79.883	Otolemur_garnettii
ENSSHAG00000013246	-	99	83.186	ENSPPAG00000035100	LARP4	50	83.090	Pan_paniscus
ENSSHAG00000013246	-	90	69.256	ENSPPAG00000039122	-	68	69.256	Pan_paniscus
ENSSHAG00000013246	-	90	67.638	ENSPTRG00000045907	-	68	71.591	Pan_troglodytes
ENSSHAG00000013246	-	99	83.776	ENSPANG00000022964	LARP4	52	83.673	Papio_anubis
ENSSHAG00000013246	-	76	65.169	ENSPMGG00000002719	larp4ab	78	65.918	Periophthalmus_magnuspinnatus
ENSSHAG00000013246	-	96	81.845	ENSPEMG00000018433	Larp4	51	81.765	Peromyscus_maniculatus_bairdii
ENSSHAG00000013246	-	73	58.333	ENSPMAG00000001038	-	99	58.730	Petromyzon_marinus
ENSSHAG00000013246	-	72	57.937	ENSPMAG00000002788	LARP4	55	54.333	Petromyzon_marinus
ENSSHAG00000013246	-	77	71.756	ENSPREG00000016263	larp4ab	64	80.741	Poecilia_reticulata
ENSSHAG00000013246	-	99	83.235	ENSPPYG00000004512	-	66	83.140	Pongo_abelii
ENSSHAG00000013246	-	100	74.052	ENSPCAG00000003671	LARP4	50	74.052	Procavia_capensis
ENSSHAG00000013246	-	100	83.673	ENSRBIG00000038857	-	76	83.673	Rhinopithecus_bieti
ENSSHAG00000013246	-	100	83.965	ENSRROG00000042764	-	76	83.965	Rhinopithecus_roxellana
ENSSHAG00000013246	-	91	80.769	ENSRROG00000025487	-	68	85.656	Rhinopithecus_roxellana
ENSSHAG00000013246	-	99	82.301	ENSSBOG00000026650	LARP4	52	82.216	Saimiri_boliviensis_boliviensis
ENSSHAG00000013246	-	81	74.460	ENSSPAG00000007222	larp4aa	74	81.818	Stegastes_partitus
ENSSHAG00000013246	-	99	83.824	ENSSSCG00000028516	LARP4	56	83.721	Sus_scrofa
ENSSHAG00000013246	-	73	74.502	ENSTRUG00000015939	larp4aa	73	74.502	Takifugu_rubripes
ENSSHAG00000013246	-	100	83.965	ENSUAMG00000013764	LARP4	76	83.965	Ursus_americanus
ENSSHAG00000013246	-	99	84.956	ENSVVUG00000024717	LARP4	56	84.840	Vulpes_vulpes
ENSSHAG00000013246	-	75	72.481	ENSXCOG00000019635	larp4ab	64	79.562	Xiphophorus_couchianus