EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000013338 (Gene tree)
Gene ID: 100924142
Gene Symbol: CASC3
Alias: BTZ|MLN51
Full Name: CASC3%2C exon junction complex subunit
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 12424 bases
Position: chrGL856827.1:1217421-1229844
Accession: 17040
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000015654	Btz	PF09405.10	1e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000015782	CASC3-201	4106	-	ENSSHAP00000015654	627 (aa)	-	G3WJP9

Gene Model

Click here to download ENSSHAG00000013338's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03013	RNA transport	KEGG
shr03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000013338's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000013338	CASC3	99	84.160	ENSG00000108349	CASC3	87	87.437	Homo_sapiens
ENSSHAG00000013338	CASC3	99	84.800	ENSAMEG00000007764	CASC3	89	85.191	Ailuropoda_melanoleuca
ENSSHAG00000013338	CASC3	88	49.639	ENSACIG00000000720	casc3	83	49.640	Amphilophus_citrinellus
ENSSHAG00000013338	CASC3	81	55.096	ENSATEG00000017196	casc3	68	54.019	Anabas_testudineus
ENSSHAG00000013338	CASC3	99	72.871	ENSACAG00000002674	CASC3	87	72.354	Anolis_carolinensis
ENSSHAG00000013338	CASC3	61	91.509	ENSANAG00000031954	-	83	91.509	Aotus_nancymaae
ENSSHAG00000013338	CASC3	100	75.439	ENSANAG00000034820	-	88	80.838	Aotus_nancymaae
ENSSHAG00000013338	CASC3	100	84.444	ENSBTAG00000006250	CASC3	89	85.191	Bos_taurus
ENSSHAG00000013338	CASC3	99	81.600	ENSCJAG00000016032	CASC3	89	82.006	Callithrix_jacchus
ENSSHAG00000013338	CASC3	99	85.120	ENSCAFG00000016141	CASC3	89	85.510	Canis_familiaris
ENSSHAG00000013338	CASC3	100	83.438	ENSCAFG00020018882	CASC3	88	87.202	Canis_lupus_dingo
ENSSHAG00000013338	CASC3	100	84.286	ENSCHIG00000006338	CASC3	90	83.968	Capra_hircus
ENSSHAG00000013338	CASC3	100	84.713	ENSTSYG00000002975	CASC3	89	85.032	Carlito_syrichta
ENSSHAG00000013338	CASC3	98	80.097	ENSCAPG00000010514	CASC3	100	80.421	Cavia_aperea
ENSSHAG00000013338	CASC3	99	80.000	ENSCPOG00000015139	CASC3	90	80.414	Cavia_porcellus
ENSSHAG00000013338	CASC3	99	82.588	ENSCCAG00000033620	CASC3	89	83.307	Cebus_capucinus
ENSSHAG00000013338	CASC3	99	84.320	ENSCATG00000033593	CASC3	89	84.713	Cercocebus_atys
ENSSHAG00000013338	CASC3	99	81.760	ENSCLAG00000013730	CASC3	89	82.325	Chinchilla_lanigera
ENSSHAG00000013338	CASC3	99	84.320	ENSCSAG00000002777	CASC3	89	84.713	Chlorocebus_sabaeus
ENSSHAG00000013338	CASC3	99	78.095	ENSCPBG00000004750	CASC3	95	79.032	Chrysemys_picta_bellii
ENSSHAG00000013338	CASC3	99	84.160	ENSCANG00000008814	CASC3	89	84.554	Colobus_angolensis_palliatus
ENSSHAG00000013338	CASC3	100	82.698	ENSCGRG00001014706	Casc3	89	84.076	Cricetulus_griseus_chok1gshd
ENSSHAG00000013338	CASC3	100	83.758	ENSCGRG00000001952	Casc3	96	84.076	Cricetulus_griseus_crigri
ENSSHAG00000013338	CASC3	80	53.896	ENSCSEG00000010047	casc3	55	67.105	Cynoglossus_semilaevis
ENSSHAG00000013338	CASC3	99	84.000	ENSDNOG00000017249	CASC3	86	84.395	Dasypus_novemcinctus
ENSSHAG00000013338	CASC3	99	79.520	ENSETEG00000013720	CASC3	89	79.459	Echinops_telfairi
ENSSHAG00000013338	CASC3	99	38.338	ENSEBUG00000010654	casc3	89	36.404	Eptatretus_burgeri
ENSSHAG00000013338	CASC3	100	83.281	ENSEASG00005002909	CASC3	89	87.500	Equus_asinus_asinus
ENSSHAG00000013338	CASC3	99	84.960	ENSECAG00000019947	CASC3	78	85.350	Equus_caballus
ENSSHAG00000013338	CASC3	69	78.802	ENSEEUG00000014253	CASC3	85	79.493	Erinaceus_europaeus
ENSSHAG00000013338	CASC3	99	84.480	ENSFCAG00000014998	CASC3	89	84.873	Felis_catus
ENSSHAG00000013338	CASC3	99	74.335	ENSFALG00000000412	CASC3	98	74.254	Ficedula_albicollis
ENSSHAG00000013338	CASC3	100	79.650	ENSFDAG00000020696	CASC3	96	79.968	Fukomys_damarensis
ENSSHAG00000013338	CASC3	80	55.844	ENSFHEG00000015793	casc3	77	53.289	Fundulus_heteroclitus
ENSSHAG00000013338	CASC3	99	76.849	ENSGALG00000031813	CASC3	95	76.236	Gallus_gallus
ENSSHAG00000013338	CASC3	72	64.780	ENSGAFG00000017148	casc3	58	53.333	Gambusia_affinis
ENSSHAG00000013338	CASC3	98	77.383	ENSGAGG00000008432	CASC3	94	78.479	Gopherus_agassizii
ENSSHAG00000013338	CASC3	99	83.680	ENSGGOG00000005067	CASC3	89	84.076	Gorilla_gorilla
ENSSHAG00000013338	CASC3	99	81.021	ENSHGLG00000012117	CASC3	89	81.051	Heterocephalus_glaber_female
ENSSHAG00000013338	CASC3	100	81.111	ENSHGLG00100002268	CASC3	100	81.051	Heterocephalus_glaber_male
ENSSHAG00000013338	CASC3	99	83.360	ENSSTOG00000006374	CASC3	89	83.917	Ictidomys_tridecemlineatus
ENSSHAG00000013338	CASC3	100	83.121	ENSJJAG00000023525	Casc3	89	83.439	Jaculus_jaculus
ENSSHAG00000013338	CASC3	66	60.833	ENSKMAG00000019507	casc3	81	48.511	Kryptolebias_marmoratus
ENSSHAG00000013338	CASC3	71	69.697	ENSLBEG00000005435	casc3	57	59.887	Labrus_bergylta
ENSSHAG00000013338	CASC3	98	61.041	ENSLACG00000013200	CASC3	87	59.906	Latimeria_chalumnae
ENSSHAG00000013338	CASC3	70	73.430	ENSLOCG00000013518	casc3	60	72.947	Lepisosteus_oculatus
ENSSHAG00000013338	CASC3	100	84.395	ENSLAFG00000000606	CASC3	89	84.713	Loxodonta_africana
ENSSHAG00000013338	CASC3	99	84.320	ENSMFAG00000041496	CASC3	88	87.554	Macaca_fascicularis
ENSSHAG00000013338	CASC3	99	84.320	ENSMMUG00000045187	CASC3	89	84.713	Macaca_mulatta
ENSSHAG00000013338	CASC3	100	84.395	ENSMLEG00000029049	CASC3	99	84.713	Mandrillus_leucophaeus
ENSSHAG00000013338	CASC3	83	54.062	ENSMAMG00000005235	casc3	68	53.698	Mastacembelus_armatus
ENSSHAG00000013338	CASC3	97	75.987	ENSMGAG00000013247	CASC3	99	75.974	Meleagris_gallopavo
ENSSHAG00000013338	CASC3	80	82.869	ENSMAUG00000006023	Casc3	80	82.869	Mesocricetus_auratus
ENSSHAG00000013338	CASC3	99	83.467	ENSMICG00000003321	CASC3	89	83.917	Microcebus_murinus
ENSSHAG00000013338	CASC3	100	83.121	ENSMOCG00000013644	Casc3	89	83.439	Microtus_ochrogaster
ENSSHAG00000013338	CASC3	50	53.894	ENSMMOG00000014339	casc3	83	46.761	Mola_mola
ENSSHAG00000013338	CASC3	99	88.800	ENSMODG00000013044	CASC3	82	89.331	Monodelphis_domestica
ENSSHAG00000013338	CASC3	99	83.173	MGP_CAROLIEiJ_G0017099	Casc3	89	83.254	Mus_caroli
ENSSHAG00000013338	CASC3	99	82.532	ENSMUSG00000078676	Casc3	89	82.616	Mus_musculus
ENSSHAG00000013338	CASC3	99	82.692	MGP_SPRETEiJ_G0017943	Casc3	89	82.775	Mus_spretus
ENSSHAG00000013338	CASC3	99	84.960	ENSMPUG00000014903	CASC3	89	85.350	Mustela_putorius_furo
ENSSHAG00000013338	CASC3	99	82.935	ENSMLUG00000010520	CASC3	89	82.698	Myotis_lucifugus
ENSSHAG00000013338	CASC3	99	82.853	ENSNGAG00000023121	Casc3	89	82.935	Nannospalax_galili
ENSSHAG00000013338	CASC3	99	83.360	ENSNLEG00000001598	CASC3	89	84.076	Nomascus_leucogenys
ENSSHAG00000013338	CASC3	69	78.291	ENSOPRG00000007240	-	64	78.440	Ochotona_princeps
ENSSHAG00000013338	CASC3	100	80.255	ENSODEG00000017858	CASC3	89	81.210	Octodon_degus
ENSSHAG00000013338	CASC3	89	53.380	ENSOANG00000003499	-	85	68.404	Ornithorhynchus_anatinus
ENSSHAG00000013338	CASC3	99	84.776	ENSOCUG00000002954	CASC3	89	84.848	Oryctolagus_cuniculus
ENSSHAG00000013338	CASC3	99	83.387	ENSOGAG00000034486	CASC3	87	83.974	Otolemur_garnettii
ENSSHAG00000013338	CASC3	99	85.440	ENSOARG00000013239	CASC3	89	85.191	Ovis_aries
ENSSHAG00000013338	CASC3	99	84.160	ENSPPAG00000035069	CASC3	89	84.554	Pan_paniscus
ENSSHAG00000013338	CASC3	99	84.320	ENSPPRG00000023670	CASC3	89	84.713	Panthera_pardus
ENSSHAG00000013338	CASC3	99	83.840	ENSPTIG00000010891	CASC3	89	84.236	Panthera_tigris_altaica
ENSSHAG00000013338	CASC3	99	84.000	ENSPANG00000021708	CASC3	89	84.395	Papio_anubis
ENSSHAG00000013338	CASC3	98	49.008	ENSPKIG00000023186	casc3	90	48.387	Paramormyrops_kingsleyae
ENSSHAG00000013338	CASC3	100	83.732	ENSPEMG00000009774	Casc3	90	83.732	Peromyscus_maniculatus_bairdii
ENSSHAG00000013338	CASC3	100	94.737	ENSPCIG00000025678	CASC3	90	94.737	Phascolarctos_cinereus
ENSSHAG00000013338	CASC3	62	58.621	ENSPFOG00000017632	casc3	90	47.050	Poecilia_formosa
ENSSHAG00000013338	CASC3	74	65.217	ENSPLAG00000005268	casc3	69	53.896	Poecilia_latipinna
ENSSHAG00000013338	CASC3	78	44.711	ENSPMEG00000010299	casc3	81	43.912	Poecilia_mexicana
ENSSHAG00000013338	CASC3	70	65.714	ENSPREG00000011856	casc3	66	64.430	Poecilia_reticulata
ENSSHAG00000013338	CASC3	99	83.387	ENSPPYG00000008467	CASC3	89	83.706	Pongo_abelii
ENSSHAG00000013338	CASC3	99	83.146	ENSPCOG00000008183	CASC3	89	83.599	Propithecus_coquereli
ENSSHAG00000013338	CASC3	99	84.480	ENSPVAG00000008556	CASC3	89	84.873	Pteropus_vampyrus
ENSSHAG00000013338	CASC3	89	90.541	ENSRNOG00000009716	Casc3	87	90.667	Rattus_norvegicus
ENSSHAG00000013338	CASC3	99	84.480	ENSRBIG00000033289	CASC3	90	83.758	Rhinopithecus_bieti
ENSSHAG00000013338	CASC3	99	84.480	ENSRROG00000022337	CASC3	89	84.873	Rhinopithecus_roxellana
ENSSHAG00000013338	CASC3	99	82.097	ENSSBOG00000031406	CASC3	98	83.387	Saimiri_boliviensis_boliviensis
ENSSHAG00000013338	CASC3	99	48.656	ENSSFOG00015002645	casc3	91	48.873	Scleropages_formosus
ENSSHAG00000013338	CASC3	74	67.361	ENSSMAG00000016096	casc3	59	57.297	Scophthalmus_maximus
ENSSHAG00000013338	CASC3	50	50.000	ENSSDUG00000016893	casc3	77	44.828	Seriola_dumerili
ENSSHAG00000013338	CASC3	95	73.490	ENSSARG00000010378	CASC3	97	73.604	Sorex_araneus
ENSSHAG00000013338	CASC3	81	55.519	ENSSPAG00000023008	casc3	68	54.605	Stegastes_partitus
ENSSHAG00000013338	CASC3	100	85.350	ENSSSCG00000017477	CASC3	99	85.191	Sus_scrofa
ENSSHAG00000013338	CASC3	84	75.856	ENSTGUG00000002300	CASC3	99	74.618	Taeniopygia_guttata
ENSSHAG00000013338	CASC3	83	54.054	ENSTRUG00000000673	casc3	70	53.165	Takifugu_rubripes
ENSSHAG00000013338	CASC3	62	91.038	ENSTBEG00000017459	CASC3	57	92.453	Tupaia_belangeri
ENSSHAG00000013338	CASC3	96	74.834	ENSTTRG00000016896	CASC3	98	74.619	Tursiops_truncatus
ENSSHAG00000013338	CASC3	100	83.123	ENSUAMG00000015116	CASC3	88	87.126	Ursus_americanus
ENSSHAG00000013338	CASC3	100	84.236	ENSUMAG00000017697	CASC3	98	90.576	Ursus_maritimus
ENSSHAG00000013338	CASC3	69	95.798	ENSVPAG00000000799	CASC3	61	95.798	Vicugna_pacos
ENSSHAG00000013338	CASC3	99	85.120	ENSVVUG00000000997	CASC3	89	85.510	Vulpes_vulpes
ENSSHAG00000013338	CASC3	99	60.127	ENSXETG00000024395	casc3	89	61.844	Xenopus_tropicalis
ENSSHAG00000013338	CASC3	71	68.966	ENSXMAG00000013937	casc3	72	51.792	Xiphophorus_maculatus