EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000013392 (Gene tree)
Gene ID: 100931337
Gene Symbol: LARP4B
Alias: KIAA0217|LARP5
Full Name: La ribonucleoprotein domain family member 4B
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 80870 bases
Position: chrGL861672.1:1227536-1308405
Accession: 100931337
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000015714	La	PF05383.17	2.9e-14	1	1
ENSSHAP00000015713	La	PF05383.17	2.9e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000015842	LARP4B-202	2223	-	ENSSHAP00000015714	722 (aa)	XP_012406645	G3WJV9
ENSSHAT00000015841	LARP4B-201	2238	-	ENSSHAP00000015713	727 (aa)	-	G3WJV8

Gene Model

Click here to download ENSSHAG00000013392's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000013392's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000013392	LARP4B	100	75.368	ENSG00000107929	LARP4B	100	75.368	Homo_sapiens
ENSSHAG00000013392	LARP4B	100	56.258	ENSAPOG00000020531	LARP4B	100	56.522	Acanthochromis_polyacanthus
ENSSHAG00000013392	LARP4B	100	73.930	ENSAMEG00000001810	LARP4B	100	73.930	Ailuropoda_melanoleuca
ENSSHAG00000013392	LARP4B	89	58.040	ENSAOCG00000007887	-	96	64.418	Amphiprion_ocellaris
ENSSHAG00000013392	LARP4B	93	61.213	ENSAPEG00000002512	LARP4B	98	58.670	Amphiprion_percula
ENSSHAG00000013392	LARP4B	100	57.673	ENSATEG00000012614	LARP4B	100	58.184	Anabas_testudineus
ENSSHAG00000013392	LARP4B	100	79.283	ENSAPLG00000003813	LARP4B	98	79.283	Anas_platyrhynchos
ENSSHAG00000013392	LARP4B	100	80.164	ENSACAG00000002858	LARP4B	100	80.164	Anolis_carolinensis
ENSSHAG00000013392	LARP4B	100	74.599	ENSANAG00000007531	-	100	74.599	Aotus_nancymaae
ENSSHAG00000013392	LARP4B	100	59.839	ENSACLG00000026356	LARP4B	100	59.893	Astatotilapia_calliptera
ENSSHAG00000013392	LARP4B	94	53.923	ENSAMXG00000003335	larp4b	91	55.539	Astyanax_mexicanus
ENSSHAG00000013392	LARP4B	100	75.068	ENSBTAG00000013899	LARP4B	100	75.068	Bos_taurus
ENSSHAG00000013392	LARP4B	100	74.599	ENSCJAG00000018434	LARP4B	100	74.599	Callithrix_jacchus
ENSSHAG00000013392	LARP4B	100	74.465	ENSCAFG00020004209	LARP4B	100	76.739	Canis_lupus_dingo
ENSSHAG00000013392	LARP4B	100	71.867	ENSCHIG00000013543	LARP4B	100	71.867	Capra_hircus
ENSSHAG00000013392	LARP4B	84	80.298	ENSTSYG00000002568	LARP4B	99	80.570	Carlito_syrichta
ENSSHAG00000013392	LARP4B	90	74.194	ENSCAPG00000009725	LARP4B	89	74.194	Cavia_aperea
ENSSHAG00000013392	LARP4B	100	77.273	ENSCPOG00000009375	LARP4B	100	77.139	Cavia_porcellus
ENSSHAG00000013392	LARP4B	100	74.465	ENSCCAG00000024869	LARP4B	100	74.465	Cebus_capucinus
ENSSHAG00000013392	LARP4B	100	75.535	ENSCATG00000019750	LARP4B	100	75.535	Cercocebus_atys
ENSSHAG00000013392	LARP4B	100	78.955	ENSCLAG00000011570	LARP4B	100	78.846	Chinchilla_lanigera
ENSSHAG00000013392	LARP4B	65	85.294	ENSCHOG00000007831	-	64	85.294	Choloepus_hoffmanni
ENSSHAG00000013392	LARP4B	100	82.079	ENSCPBG00000017063	LARP4B	100	82.079	Chrysemys_picta_bellii
ENSSHAG00000013392	LARP4B	100	73.930	ENSCANG00000038021	LARP4B	100	73.930	Colobus_angolensis_palliatus
ENSSHAG00000013392	LARP4B	100	75.467	ENSCGRG00001022930	Larp4b	100	75.467	Cricetulus_griseus_chok1gshd
ENSSHAG00000013392	LARP4B	100	75.467	ENSCGRG00000006022	Larp4b	100	75.467	Cricetulus_griseus_crigri
ENSSHAG00000013392	LARP4B	100	56.622	ENSCSEG00000007342	LARP4B	100	55.839	Cynoglossus_semilaevis
ENSSHAG00000013392	LARP4B	100	57.834	ENSCVAG00000008910	LARP4B	100	58.462	Cyprinodon_variegatus
ENSSHAG00000013392	LARP4B	95	52.566	ENSDARG00000062146	larp4b	90	55.891	Danio_rerio
ENSSHAG00000013392	LARP4B	96	81.205	ENSDNOG00000045543	-	100	82.036	Dasypus_novemcinctus
ENSSHAG00000013392	LARP4B	100	74.599	ENSDORG00000009328	Larp4b	100	76.963	Dipodomys_ordii
ENSSHAG00000013392	LARP4B	87	77.211	ENSETEG00000011249	LARP4B	90	76.871	Echinops_telfairi
ENSSHAG00000013392	LARP4B	100	74.733	ENSEASG00005019068	-	100	74.733	Equus_asinus_asinus
ENSSHAG00000013392	LARP4B	100	74.733	ENSECAG00000024040	LARP4B	100	74.733	Equus_caballus
ENSSHAG00000013392	LARP4B	100	71.638	ENSEEUG00000008391	LARP4B	98	71.638	Erinaceus_europaeus
ENSSHAG00000013392	LARP4B	100	60.051	ENSELUG00000008626	LARP4B	100	60.742	Esox_lucius
ENSSHAG00000013392	LARP4B	88	40.902	ENSELUG00000001417	-	94	41.327	Esox_lucius
ENSSHAG00000013392	LARP4B	100	73.635	ENSFCAG00000000721	-	100	73.635	Felis_catus
ENSSHAG00000013392	LARP4B	100	80.438	ENSFALG00000006961	LARP4B	100	80.438	Ficedula_albicollis
ENSSHAG00000013392	LARP4B	100	76.471	ENSFDAG00000006158	LARP4B	97	76.471	Fukomys_damarensis
ENSSHAG00000013392	LARP4B	100	51.507	ENSFHEG00000013037	LARP4B	65	89.076	Fundulus_heteroclitus
ENSSHAG00000013392	LARP4B	77	65.835	ENSGMOG00000010818	-	88	66.339	Gadus_morhua
ENSSHAG00000013392	LARP4B	100	81.063	ENSGALG00000006672	LARP4B	100	81.063	Gallus_gallus
ENSSHAG00000013392	LARP4B	100	55.740	ENSGACG00000017535	LARP4B	98	57.051	Gasterosteus_aculeatus
ENSSHAG00000013392	LARP4B	94	81.050	ENSGAGG00000008598	LARP4B	100	81.050	Gopherus_agassizii
ENSSHAG00000013392	LARP4B	100	75.368	ENSGGOG00000003572	LARP4B	100	75.368	Gorilla_gorilla
ENSSHAG00000013392	LARP4B	100	58.974	ENSHBUG00000007535	LARP4B	100	59.207	Haplochromis_burtoni
ENSSHAG00000013392	LARP4B	100	77.097	ENSHGLG00000012936	LARP4B	100	78.998	Heterocephalus_glaber_female
ENSSHAG00000013392	LARP4B	100	77.170	ENSHGLG00100016220	-	100	77.170	Heterocephalus_glaber_male
ENSSHAG00000013392	LARP4B	87	64.953	ENSHGLG00100017261	-	100	64.961	Heterocephalus_glaber_male
ENSSHAG00000013392	LARP4B	99	55.496	ENSHCOG00000011581	LARP4B	89	55.228	Hippocampus_comes
ENSSHAG00000013392	LARP4B	95	52.933	ENSIPUG00000009705	larp4b	97	53.352	Ictalurus_punctatus
ENSSHAG00000013392	LARP4B	100	74.533	ENSSTOG00000000587	LARP4B	100	80.815	Ictidomys_tridecemlineatus
ENSSHAG00000013392	LARP4B	100	76.975	ENSJJAG00000020847	Larp4b	100	76.975	Jaculus_jaculus
ENSSHAG00000013392	LARP4B	100	58.291	ENSKMAG00000021674	LARP4B	100	58.801	Kryptolebias_marmoratus
ENSSHAG00000013392	LARP4B	79	65.050	ENSLBEG00000025293	-	82	65.494	Labrus_bergylta
ENSSHAG00000013392	LARP4B	94	69.609	ENSLACG00000009492	LARP4B	100	69.609	Latimeria_chalumnae
ENSSHAG00000013392	LARP4B	100	67.881	ENSLOCG00000012290	larp4b	100	68.151	Lepisosteus_oculatus
ENSSHAG00000013392	LARP4B	100	80.186	ENSLAFG00000015334	LARP4B	99	81.857	Loxodonta_africana
ENSSHAG00000013392	LARP4B	100	75.535	ENSMFAG00000001766	LARP4B	100	73.797	Macaca_fascicularis
ENSSHAG00000013392	LARP4B	100	75.535	ENSMMUG00000005279	LARP4B	100	75.535	Macaca_mulatta
ENSSHAG00000013392	LARP4B	100	75.401	ENSMNEG00000014019	LARP4B	100	73.663	Macaca_nemestrina
ENSSHAG00000013392	LARP4B	100	75.300	ENSMLEG00000035198	LARP4B	100	75.300	Mandrillus_leucophaeus
ENSSHAG00000013392	LARP4B	100	57.982	ENSMAMG00000013742	LARP4B	100	57.982	Mastacembelus_armatus
ENSSHAG00000013392	LARP4B	94	57.008	ENSMZEG00005014594	-	100	57.802	Maylandia_zebra
ENSSHAG00000013392	LARP4B	100	57.047	ENSMZEG00005006498	-	96	65.282	Maylandia_zebra
ENSSHAG00000013392	LARP4B	100	77.128	ENSMGAG00000005472	LARP4B	100	77.128	Meleagris_gallopavo
ENSSHAG00000013392	LARP4B	100	75.766	ENSMAUG00000021657	Larp4b	100	78.609	Mesocricetus_auratus
ENSSHAG00000013392	LARP4B	100	74.003	ENSMICG00000001301	LARP4B	100	74.140	Microcebus_murinus
ENSSHAG00000013392	LARP4B	97	73.482	ENSMOCG00000021452	Larp4b	100	73.482	Microtus_ochrogaster
ENSSHAG00000013392	LARP4B	100	55.376	ENSMMOG00000011253	-	100	55.182	Mola_mola
ENSSHAG00000013392	LARP4B	100	91.667	ENSMODG00000005957	LARP4B	100	91.803	Monodelphis_domestica
ENSSHAG00000013392	LARP4B	100	51.359	ENSMALG00000012432	LARP4B	100	52.115	Monopterus_albus
ENSSHAG00000013392	LARP4B	100	75.802	MGP_CAROLIEiJ_G0018216	Larp4b	100	78.606	Mus_caroli
ENSSHAG00000013392	LARP4B	100	75.467	ENSMUSG00000033499	Larp4b	100	77.990	Mus_musculus
ENSSHAG00000013392	LARP4B	100	75.668	MGP_PahariEiJ_G0019266	Larp4b	100	78.417	Mus_pahari
ENSSHAG00000013392	LARP4B	100	75.333	MGP_SPRETEiJ_G0019074	Larp4b	100	77.990	Mus_spretus
ENSSHAG00000013392	LARP4B	100	73.930	ENSMPUG00000016220	LARP4B	97	73.930	Mustela_putorius_furo
ENSSHAG00000013392	LARP4B	96	73.926	ENSMLUG00000005880	LARP4B	99	74.069	Myotis_lucifugus
ENSSHAG00000013392	LARP4B	100	75.000	ENSNGAG00000001750	Larp4b	100	75.000	Nannospalax_galili
ENSSHAG00000013392	LARP4B	100	50.870	ENSNBRG00000020018	LARP4B	100	50.866	Neolamprologus_brichardi
ENSSHAG00000013392	LARP4B	100	75.401	ENSNLEG00000013442	LARP4B	100	75.401	Nomascus_leucogenys
ENSSHAG00000013392	LARP4B	83	87.228	ENSMEUG00000013114	-	83	87.228	Notamacropus_eugenii
ENSSHAG00000013392	LARP4B	100	73.775	ENSOPRG00000003300	LARP4B	100	73.775	Ochotona_princeps
ENSSHAG00000013392	LARP4B	100	72.727	ENSODEG00000001109	LARP4B	100	73.469	Octodon_degus
ENSSHAG00000013392	LARP4B	100	59.155	ENSONIG00000017705	LARP4B	100	59.335	Oreochromis_niloticus
ENSSHAG00000013392	LARP4B	100	77.207	ENSOANG00000006100	LARP4B	100	77.339	Ornithorhynchus_anatinus
ENSSHAG00000013392	LARP4B	100	74.968	ENSOCUG00000004950	LARP4B	97	74.968	Oryctolagus_cuniculus
ENSSHAG00000013392	LARP4B	100	57.308	ENSORLG00000006080	LARP4B	100	57.564	Oryzias_latipes
ENSSHAG00000013392	LARP4B	100	57.033	ENSORLG00020020940	LARP4B	100	57.106	Oryzias_latipes_hni
ENSSHAG00000013392	LARP4B	100	56.978	ENSORLG00015020608	LARP4B	100	56.611	Oryzias_latipes_hsok
ENSSHAG00000013392	LARP4B	100	55.852	ENSOMEG00000019619	LARP4B	100	56.410	Oryzias_melastigma
ENSSHAG00000013392	LARP4B	96	73.609	ENSOGAG00000011540	LARP4B	99	73.609	Otolemur_garnettii
ENSSHAG00000013392	LARP4B	100	71.846	ENSOARG00000015320	LARP4B	98	71.846	Ovis_aries
ENSSHAG00000013392	LARP4B	100	75.368	ENSPPAG00000039232	LARP4B	100	75.368	Pan_paniscus
ENSSHAG00000013392	LARP4B	100	73.832	ENSPPRG00000009489	LARP4B	100	73.832	Panthera_pardus
ENSSHAG00000013392	LARP4B	100	73.698	ENSPTIG00000008543	LARP4B	100	73.698	Panthera_tigris_altaica
ENSSHAG00000013392	LARP4B	100	75.368	ENSPTRG00000002235	LARP4B	100	75.368	Pan_troglodytes
ENSSHAG00000013392	LARP4B	100	75.535	ENSPANG00000023546	LARP4B	100	73.797	Papio_anubis
ENSSHAG00000013392	LARP4B	98	56.988	ENSPKIG00000012368	LARP4B	97	57.123	Paramormyrops_kingsleyae
ENSSHAG00000013392	LARP4B	75	87.619	ENSPSIG00000005600	LARP4B	99	87.619	Pelodiscus_sinensis
ENSSHAG00000013392	LARP4B	76	59.966	ENSPMGG00000008261	LARP4B	76	60.485	Periophthalmus_magnuspinnatus
ENSSHAG00000013392	LARP4B	100	75.936	ENSPEMG00000014052	Larp4b	100	75.802	Peromyscus_maniculatus_bairdii
ENSSHAG00000013392	LARP4B	100	57.125	ENSPFOG00000000029	LARP4B	100	57.781	Poecilia_formosa
ENSSHAG00000013392	LARP4B	100	58.000	ENSPLAG00000002871	LARP4B	100	58.021	Poecilia_latipinna
ENSSHAG00000013392	LARP4B	100	57.179	ENSPMEG00000016361	LARP4B	100	57.834	Poecilia_mexicana
ENSSHAG00000013392	LARP4B	100	75.567	ENSPPYG00000002035	LARP4B	97	75.567	Pongo_abelii
ENSSHAG00000013392	LARP4B	100	73.226	ENSPCOG00000014688	LARP4B	100	73.226	Propithecus_coquereli
ENSSHAG00000013392	LARP4B	82	72.437	ENSPVAG00000009784	LARP4B	83	72.437	Pteropus_vampyrus
ENSSHAG00000013392	LARP4B	100	58.831	ENSPNYG00000024252	LARP4B	100	59.591	Pundamilia_nyererei
ENSSHAG00000013392	LARP4B	94	54.688	ENSPNAG00000028956	larp4b	95	54.636	Pygocentrus_nattereri
ENSSHAG00000013392	LARP4B	99	75.267	ENSRNOG00000015888	Larp4b	100	75.401	Rattus_norvegicus
ENSSHAG00000013392	LARP4B	100	75.267	ENSRBIG00000033294	LARP4B	100	75.267	Rhinopithecus_bieti
ENSSHAG00000013392	LARP4B	100	75.134	ENSRROG00000033879	LARP4B	100	75.134	Rhinopithecus_roxellana
ENSSHAG00000013392	LARP4B	100	69.652	ENSSBOG00000021109	LARP4B	100	69.652	Saimiri_boliviensis_boliviensis
ENSSHAG00000013392	LARP4B	92	61.618	ENSSFOG00015003256	LARP4B	90	59.290	Scleropages_formosus
ENSSHAG00000013392	LARP4B	84	88.889	ENSSMAG00000005982	-	99	88.889	Scophthalmus_maximus
ENSSHAG00000013392	LARP4B	100	58.629	ENSSDUG00000006704	LARP4B	100	58.906	Seriola_dumerili
ENSSHAG00000013392	LARP4B	89	88.889	ENSSLDG00000020660	LARP4B	95	88.889	Seriola_lalandi_dorsalis
ENSSHAG00000013392	LARP4B	65	89.524	ENSSARG00000001243	-	79	89.524	Sorex_araneus
ENSSHAG00000013392	LARP4B	100	79.086	ENSSPUG00000002102	-	100	79.086	Sphenodon_punctatus
ENSSHAG00000013392	LARP4B	97	82.373	ENSSPUG00000013734	-	100	82.373	Sphenodon_punctatus
ENSSHAG00000013392	LARP4B	100	57.067	ENSSPAG00000014628	LARP4B	100	56.760	Stegastes_partitus
ENSSHAG00000013392	LARP4B	100	71.658	ENSSSCG00000011162	LARP4B	100	74.715	Sus_scrofa
ENSSHAG00000013392	LARP4B	100	79.864	ENSTGUG00000000811	-	100	79.864	Taeniopygia_guttata
ENSSHAG00000013392	LARP4B	100	54.429	ENSTNIG00000004571	-	98	55.195	Tetraodon_nigroviridis
ENSSHAG00000013392	LARP4B	99	53.393	ENSTNIG00000007991	LARP4B	99	57.040	Tetraodon_nigroviridis
ENSSHAG00000013392	LARP4B	90	76.740	ENSTTRG00000011151	LARP4B	90	76.740	Tursiops_truncatus
ENSSHAG00000013392	LARP4B	87	74.695	ENSUAMG00000016461	LARP4B	95	74.695	Ursus_americanus
ENSSHAG00000013392	LARP4B	100	73.930	ENSUMAG00000016127	LARP4B	100	73.930	Ursus_maritimus
ENSSHAG00000013392	LARP4B	100	74.198	ENSVVUG00000008641	LARP4B	100	76.019	Vulpes_vulpes
ENSSHAG00000013392	LARP4B	99	73.735	ENSXETG00000016882	larp4b	100	73.735	Xenopus_tropicalis
ENSSHAG00000013392	LARP4B	100	52.874	ENSXCOG00000019952	LARP4B	100	52.672	Xiphophorus_couchianus
ENSSHAG00000013392	LARP4B	100	58.056	ENSXMAG00000021533	LARP4B	100	58.151	Xiphophorus_maculatus