EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000013509 (Gene tree)
Gene ID: 100914313
Gene Symbol: HBS1L
Alias: DKFZp434g247|EF-1a|ERFS|HBS1|HSPC276|KIAA1038|eRF3c
Full Name: HBS1 like translational GTPase
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 136718 bases
Position: chrGL856951.1:1250085-1386802
Accession: 100914313
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000015856	GTP_EFTU	PF00009.27	4.6e-48	1	1
ENSSHAP00000015857	GTP_EFTU	PF00009.27	4.6e-48	1	1
ENSSHAP00000015856	MMR_HSR1	PF01926.23	1e-06	1	1
ENSSHAP00000015857	MMR_HSR1	PF01926.23	1e-06	1	1
ENSSHAP00000015856	GTP_EFTU_D3	PF03143.17	1.3e-30	1	1
ENSSHAP00000015857	GTP_EFTU_D3	PF03143.17	8.2e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000015986	HBS1L-202	2880	-	ENSSHAP00000015857	685 (aa)	-	G3WKA2
ENSSHAT00000015985	HBS1L-201	3541	-	ENSSHAP00000015856	684 (aa)	XP_003769520	G3WKA1

Gene Model

Click here to download ENSSHAG00000013509's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03015	mRNA surveillance pathway	KEGG
shr05134	Legionellosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000013509's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000013509	HBS1L	62	39.401	ENSSHAG00000004864	-	95	39.130
ENSSHAG00000013509	HBS1L	62	38.851	ENSSHAG00000018414	-	95	38.409
ENSSHAG00000013509	HBS1L	62	42.523	ENSSHAG00000005908	-	82	43.175
ENSSHAG00000013509	HBS1L	66	41.410	ENSSHAG00000002700	-	75	41.410
ENSSHAG00000013509	HBS1L	62	32.420	ENSSHAG00000001743	-	94	32.407

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000013509	HBS1L	100	89.374	ENSG00000112339	HBS1L	100	92.514	Homo_sapiens
ENSSHAG00000013509	HBS1L	80	84.718	ENSAPOG00000013169	hbs1l	90	84.741	Acanthochromis_polyacanthus
ENSSHAG00000013509	HBS1L	99	90.205	ENSAMEG00000009749	HBS1L	99	90.205	Ailuropoda_melanoleuca
ENSSHAG00000013509	HBS1L	79	77.881	ENSACIG00000017087	hbs1l	91	77.449	Amphilophus_citrinellus
ENSSHAG00000013509	HBS1L	100	70.370	ENSAPEG00000008320	hbs1l	100	70.370	Amphiprion_percula
ENSSHAG00000013509	HBS1L	100	71.045	ENSATEG00000004459	hbs1l	100	71.328	Anabas_testudineus
ENSSHAG00000013509	HBS1L	98	82.448	ENSAPLG00000007791	HBS1L	100	82.891	Anas_platyrhynchos
ENSSHAG00000013509	HBS1L	100	82.003	ENSACAG00000010120	HBS1L	100	82.003	Anolis_carolinensis
ENSSHAG00000013509	HBS1L	100	89.083	ENSANAG00000038076	HBS1L	100	89.083	Aotus_nancymaae
ENSSHAG00000013509	HBS1L	100	71.429	ENSACLG00000010469	hbs1l	100	71.429	Astatotilapia_calliptera
ENSSHAG00000013509	HBS1L	100	72.818	ENSAMXG00000004260	hbs1l	97	78.571	Astyanax_mexicanus
ENSSHAG00000013509	HBS1L	100	90.539	ENSBTAG00000020174	HBS1L	100	90.539	Bos_taurus
ENSSHAG00000013509	HBS1L	69	45.714	WBGene00010622	K07A12.4	82	45.436	Caenorhabditis_elegans
ENSSHAG00000013509	HBS1L	100	89.083	ENSCJAG00000007678	HBS1L	100	89.083	Callithrix_jacchus
ENSSHAG00000013509	HBS1L	100	89.520	ENSCAFG00000000226	HBS1L	100	89.520	Canis_familiaris
ENSSHAG00000013509	HBS1L	100	89.520	ENSCAFG00020021904	HBS1L	100	89.520	Canis_lupus_dingo
ENSSHAG00000013509	HBS1L	100	89.665	ENSCHIG00000010299	HBS1L	100	89.665	Capra_hircus
ENSSHAG00000013509	HBS1L	100	88.355	ENSTSYG00000007089	HBS1L	100	88.355	Carlito_syrichta
ENSSHAG00000013509	HBS1L	99	75.620	ENSCPOG00000007015	HBS1L	99	75.620	Cavia_porcellus
ENSSHAG00000013509	HBS1L	100	87.627	ENSCCAG00000033863	HBS1L	100	88.462	Cebus_capucinus
ENSSHAG00000013509	HBS1L	100	88.355	ENSCATG00000043042	HBS1L	100	88.355	Cercocebus_atys
ENSSHAG00000013509	HBS1L	100	87.191	ENSCLAG00000004937	HBS1L	100	87.191	Chinchilla_lanigera
ENSSHAG00000013509	HBS1L	100	88.372	ENSCSAG00000016791	HBS1L	100	88.372	Chlorocebus_sabaeus
ENSSHAG00000013509	HBS1L	97	72.388	ENSCHOG00000001852	HBS1L	99	72.388	Choloepus_hoffmanni
ENSSHAG00000013509	HBS1L	100	86.628	ENSCPBG00000017635	HBS1L	100	86.628	Chrysemys_picta_bellii
ENSSHAG00000013509	HBS1L	99	49.237	ENSCING00000005592	-	100	49.792	Ciona_intestinalis
ENSSHAG00000013509	HBS1L	99	48.870	ENSCSAVG00000002297	-	100	60.584	Ciona_savignyi
ENSSHAG00000013509	HBS1L	100	88.064	ENSCANG00000031208	HBS1L	100	88.064	Colobus_angolensis_palliatus
ENSSHAG00000013509	HBS1L	100	87.645	ENSCGRG00001024531	Hbs1l	100	87.645	Cricetulus_griseus_chok1gshd
ENSSHAG00000013509	HBS1L	100	87.645	ENSCGRG00000017361	Hbs1l	100	87.645	Cricetulus_griseus_crigri
ENSSHAG00000013509	HBS1L	99	71.671	ENSCSEG00000002794	hbs1l	94	71.893	Cynoglossus_semilaevis
ENSSHAG00000013509	HBS1L	100	70.084	ENSCVAG00000001462	hbs1l	100	70.084	Cyprinodon_variegatus
ENSSHAG00000013509	HBS1L	100	72.334	ENSDARG00000036778	hbs1l	100	73.055	Danio_rerio
ENSSHAG00000013509	HBS1L	100	87.773	ENSDORG00000005958	Hbs1l	100	87.773	Dipodomys_ordii
ENSSHAG00000013509	HBS1L	99	47.076	FBgn0042712	HBS1	100	47.646	Drosophila_melanogaster
ENSSHAG00000013509	HBS1L	100	84.134	ENSETEG00000000913	HBS1L	100	84.134	Echinops_telfairi
ENSSHAG00000013509	HBS1L	99	59.538	ENSEBUG00000010759	hbs1l	100	65.101	Eptatretus_burgeri
ENSSHAG00000013509	HBS1L	100	88.372	ENSEASG00005011148	HBS1L	100	88.517	Equus_asinus_asinus
ENSSHAG00000013509	HBS1L	100	88.663	ENSECAG00000004470	HBS1L	100	88.663	Equus_caballus
ENSSHAG00000013509	HBS1L	100	84.035	ENSEEUG00000013582	HBS1L	100	84.035	Erinaceus_europaeus
ENSSHAG00000013509	HBS1L	92	62.282	ENSELUG00000006444	hbs1l	95	62.003	Esox_lucius
ENSSHAG00000013509	HBS1L	100	89.665	ENSFCAG00000001810	HBS1L	100	92.514	Felis_catus
ENSSHAG00000013509	HBS1L	87	83.612	ENSFALG00000011898	HBS1L	100	83.612	Ficedula_albicollis
ENSSHAG00000013509	HBS1L	100	86.900	ENSFDAG00000011841	HBS1L	100	86.900	Fukomys_damarensis
ENSSHAG00000013509	HBS1L	100	70.126	ENSFHEG00000006942	hbs1l	100	70.126	Fundulus_heteroclitus
ENSSHAG00000013509	HBS1L	99	71.784	ENSGMOG00000011843	hbs1l	100	71.574	Gadus_morhua
ENSSHAG00000013509	HBS1L	100	83.745	ENSGALG00000013962	HBS1L	100	83.745	Gallus_gallus
ENSSHAG00000013509	HBS1L	100	70.680	ENSGAFG00000004157	hbs1l	100	70.680	Gambusia_affinis
ENSSHAG00000013509	HBS1L	99	70.451	ENSGACG00000011035	hbs1l	100	70.725	Gasterosteus_aculeatus
ENSSHAG00000013509	HBS1L	100	86.067	ENSGAGG00000002033	HBS1L	100	86.067	Gopherus_agassizii
ENSSHAG00000013509	HBS1L	79	87.109	ENSGGOG00000034956	-	94	93.048	Gorilla_gorilla
ENSSHAG00000013509	HBS1L	100	71.570	ENSHBUG00000013424	hbs1l	100	71.570	Haplochromis_burtoni
ENSSHAG00000013509	HBS1L	100	87.336	ENSHGLG00000000516	HBS1L	100	87.336	Heterocephalus_glaber_female
ENSSHAG00000013509	HBS1L	100	87.336	ENSHGLG00100003550	HBS1L	100	87.336	Heterocephalus_glaber_male
ENSSHAG00000013509	HBS1L	100	70.680	ENSHCOG00000007581	hbs1l	94	69.757	Hippocampus_comes
ENSSHAG00000013509	HBS1L	100	72.157	ENSIPUG00000010748	hbs1l	100	72.157	Ictalurus_punctatus
ENSSHAG00000013509	HBS1L	100	90.102	ENSSTOG00000007551	HBS1L	100	90.102	Ictidomys_tridecemlineatus
ENSSHAG00000013509	HBS1L	99	85.131	ENSJJAG00000017024	-	97	85.131	Jaculus_jaculus
ENSSHAG00000013509	HBS1L	100	69.927	ENSJJAG00000012660	-	100	70.511	Jaculus_jaculus
ENSSHAG00000013509	HBS1L	100	71.045	ENSKMAG00000012130	hbs1l	100	71.186	Kryptolebias_marmoratus
ENSSHAG00000013509	HBS1L	100	71.408	ENSLBEG00000002784	hbs1l	100	71.813	Labrus_bergylta
ENSSHAG00000013509	HBS1L	72	79.919	ENSLACG00000004528	HBS1L	98	79.877	Latimeria_chalumnae
ENSSHAG00000013509	HBS1L	100	79.024	ENSLOCG00000016221	hbs1l	94	79.024	Lepisosteus_oculatus
ENSSHAG00000013509	HBS1L	100	87.936	ENSLAFG00000007835	HBS1L	100	87.936	Loxodonta_africana
ENSSHAG00000013509	HBS1L	100	88.355	ENSMFAG00000003766	HBS1L	100	88.355	Macaca_fascicularis
ENSSHAG00000013509	HBS1L	100	80.263	ENSMMUG00000004802	HBS1L	98	90.959	Macaca_mulatta
ENSSHAG00000013509	HBS1L	100	88.355	ENSMNEG00000043942	HBS1L	100	88.355	Macaca_nemestrina
ENSSHAG00000013509	HBS1L	100	87.936	ENSMLEG00000043218	HBS1L	98	88.158	Mandrillus_leucophaeus
ENSSHAG00000013509	HBS1L	100	71.469	ENSMAMG00000016498	hbs1l	100	71.469	Mastacembelus_armatus
ENSSHAG00000013509	HBS1L	79	78.044	ENSMZEG00005024018	-	90	78.044	Maylandia_zebra
ENSSHAG00000013509	HBS1L	100	71.429	ENSMZEG00005015575	hbs1l	100	71.429	Maylandia_zebra
ENSSHAG00000013509	HBS1L	99	82.379	ENSMGAG00000013065	HBS1L	99	82.379	Meleagris_gallopavo
ENSSHAG00000013509	HBS1L	100	86.900	ENSMAUG00000001077	Hbs1l	100	86.900	Mesocricetus_auratus
ENSSHAG00000013509	HBS1L	96	86.778	ENSMICG00000001533	-	98	86.778	Microcebus_murinus
ENSSHAG00000013509	HBS1L	100	77.875	ENSMICG00000030043	-	96	94.086	Microcebus_murinus
ENSSHAG00000013509	HBS1L	100	87.355	ENSMOCG00000023038	Hbs1l	100	87.355	Microtus_ochrogaster
ENSSHAG00000013509	HBS1L	97	71.493	ENSMMOG00000015507	hbs1l	100	70.760	Mola_mola
ENSSHAG00000013509	HBS1L	100	93.421	ENSMODG00000017499	HBS1L	100	93.421	Monodelphis_domestica
ENSSHAG00000013509	HBS1L	100	71.146	ENSMALG00000010768	hbs1l	100	71.146	Monopterus_albus
ENSSHAG00000013509	HBS1L	100	85.756	MGP_CAROLIEiJ_G0015162	Hbs1l	100	85.756	Mus_caroli
ENSSHAG00000013509	HBS1L	100	85.901	ENSMUSG00000019977	Hbs1l	100	100.000	Mus_musculus
ENSSHAG00000013509	HBS1L	100	84.448	MGP_PahariEiJ_G0023782	Hbs1l	100	84.448	Mus_pahari
ENSSHAG00000013509	HBS1L	100	85.901	MGP_SPRETEiJ_G0015970	Hbs1l	100	85.901	Mus_spretus
ENSSHAG00000013509	HBS1L	100	90.539	ENSMPUG00000014810	HBS1L	100	90.539	Mustela_putorius_furo
ENSSHAG00000013509	HBS1L	100	89.665	ENSMLUG00000010618	HBS1L	100	89.665	Myotis_lucifugus
ENSSHAG00000013509	HBS1L	100	86.463	ENSNGAG00000015184	Hbs1l	100	86.463	Nannospalax_galili
ENSSHAG00000013509	HBS1L	100	71.429	ENSNBRG00000020095	hbs1l	100	71.429	Neolamprologus_brichardi
ENSSHAG00000013509	HBS1L	100	88.792	ENSNLEG00000014721	HBS1L	100	88.792	Nomascus_leucogenys
ENSSHAG00000013509	HBS1L	82	97.462	ENSMEUG00000003907	HBS1L	81	97.396	Notamacropus_eugenii
ENSSHAG00000013509	HBS1L	78	95.041	ENSOPRG00000013595	HBS1L	76	95.041	Ochotona_princeps
ENSSHAG00000013509	HBS1L	99	86.257	ENSODEG00000008959	HBS1L	100	86.310	Octodon_degus
ENSSHAG00000013509	HBS1L	100	71.711	ENSONIG00000000460	hbs1l	100	71.208	Oreochromis_niloticus
ENSSHAG00000013509	HBS1L	99	86.628	ENSOANG00000002684	-	99	86.628	Ornithorhynchus_anatinus
ENSSHAG00000013509	HBS1L	100	83.552	ENSOCUG00000011619	HBS1L	99	85.927	Oryctolagus_cuniculus
ENSSHAG00000013509	HBS1L	100	69.676	ENSORLG00000016559	hbs1l	100	70.099	Oryzias_latipes
ENSSHAG00000013509	HBS1L	100	68.627	ENSORLG00020003827	hbs1l	100	69.731	Oryzias_latipes_hni
ENSSHAG00000013509	HBS1L	100	69.590	ENSORLG00015023105	hbs1l	100	69.590	Oryzias_latipes_hsok
ENSSHAG00000013509	HBS1L	100	71.530	ENSOMEG00000016715	hbs1l	100	71.530	Oryzias_melastigma
ENSSHAG00000013509	HBS1L	100	89.520	ENSOGAG00000012604	HBS1L	100	89.520	Otolemur_garnettii
ENSSHAG00000013509	HBS1L	99	90.073	ENSOARG00000014798	-	99	90.073	Ovis_aries
ENSSHAG00000013509	HBS1L	100	89.665	ENSOARG00000005671	-	100	89.665	Ovis_aries
ENSSHAG00000013509	HBS1L	100	89.665	ENSPPAG00000029900	HBS1L	100	89.665	Pan_paniscus
ENSSHAG00000013509	HBS1L	100	89.665	ENSPPRG00000005285	HBS1L	100	89.665	Panthera_pardus
ENSSHAG00000013509	HBS1L	100	89.520	ENSPTIG00000015803	HBS1L	100	89.520	Panthera_tigris_altaica
ENSSHAG00000013509	HBS1L	100	89.665	ENSPTRG00000018630	HBS1L	100	89.665	Pan_troglodytes
ENSSHAG00000013509	HBS1L	100	88.210	ENSPANG00000007075	HBS1L	100	88.210	Papio_anubis
ENSSHAG00000013509	HBS1L	100	72.254	ENSPKIG00000023171	hbs1l	100	72.254	Paramormyrops_kingsleyae
ENSSHAG00000013509	HBS1L	86	81.145	ENSPSIG00000016467	HBS1L	97	81.818	Pelodiscus_sinensis
ENSSHAG00000013509	HBS1L	99	71.784	ENSPMGG00000018051	hbs1l	96	83.957	Periophthalmus_magnuspinnatus
ENSSHAG00000013509	HBS1L	100	86.628	ENSPEMG00000014369	Hbs1l	100	86.628	Peromyscus_maniculatus_bairdii
ENSSHAG00000013509	HBS1L	100	67.244	ENSPMAG00000002516	hbs1l	100	67.244	Petromyzon_marinus
ENSSHAG00000013509	HBS1L	100	69.817	ENSPFOG00000021764	hbs1l	100	69.817	Poecilia_formosa
ENSSHAG00000013509	HBS1L	100	70.156	ENSPLAG00000006193	hbs1l	100	70.156	Poecilia_latipinna
ENSSHAG00000013509	HBS1L	100	70.297	ENSPMEG00000000925	hbs1l	100	70.297	Poecilia_mexicana
ENSSHAG00000013509	HBS1L	100	69.774	ENSPREG00000011270	hbs1l	100	69.774	Poecilia_reticulata
ENSSHAG00000013509	HBS1L	100	88.792	ENSPPYG00000017027	HBS1L	100	88.792	Pongo_abelii
ENSSHAG00000013509	HBS1L	91	92.606	ENSPCAG00000007002	HBS1L	90	92.606	Procavia_capensis
ENSSHAG00000013509	HBS1L	87	91.271	ENSPVAG00000015229	HBS1L	90	90.943	Pteropus_vampyrus
ENSSHAG00000013509	HBS1L	100	71.429	ENSPNYG00000013360	hbs1l	100	71.429	Pundamilia_nyererei
ENSSHAG00000013509	HBS1L	100	72.518	ENSPNAG00000026721	hbs1l	100	73.381	Pygocentrus_nattereri
ENSSHAG00000013509	HBS1L	100	85.029	ENSRNOG00000014531	Hbs1l	100	85.029	Rattus_norvegicus
ENSSHAG00000013509	HBS1L	100	88.646	ENSRBIG00000004484	HBS1L	100	88.646	Rhinopithecus_bieti
ENSSHAG00000013509	HBS1L	100	88.501	ENSRROG00000026176	HBS1L	100	88.501	Rhinopithecus_roxellana
ENSSHAG00000013509	HBS1L	62	39.326	YKR084C	-	73	39.326	Saccharomyces_cerevisiae
ENSSHAG00000013509	HBS1L	100	88.792	ENSSBOG00000019696	-	100	88.792	Saimiri_boliviensis_boliviensis
ENSSHAG00000013509	HBS1L	100	79.767	ENSSBOG00000016930	-	98	86.702	Saimiri_boliviensis_boliviensis
ENSSHAG00000013509	HBS1L	99	71.907	ENSSFOG00015017544	hbs1l	96	71.907	Scleropages_formosus
ENSSHAG00000013509	HBS1L	100	70.621	ENSSMAG00000010621	hbs1l	100	70.198	Scophthalmus_maximus
ENSSHAG00000013509	HBS1L	100	71.429	ENSSDUG00000012974	hbs1l	100	71.429	Seriola_dumerili
ENSSHAG00000013509	HBS1L	100	71.711	ENSSLDG00000004960	hbs1l	99	77.778	Seriola_lalandi_dorsalis
ENSSHAG00000013509	HBS1L	98	87.054	ENSSARG00000006747	HBS1L	100	87.054	Sorex_araneus
ENSSHAG00000013509	HBS1L	99	83.066	ENSSPUG00000012389	HBS1L	99	83.796	Sphenodon_punctatus
ENSSHAG00000013509	HBS1L	97	89.489	ENSSSCG00000004169	HBS1L	99	89.489	Sus_scrofa
ENSSHAG00000013509	HBS1L	99	81.924	ENSTGUG00000011507	HBS1L	99	81.924	Taeniopygia_guttata
ENSSHAG00000013509	HBS1L	99	70.243	ENSTRUG00000016128	hbs1l	89	86.486	Takifugu_rubripes
ENSSHAG00000013509	HBS1L	99	71.994	ENSTNIG00000016320	hbs1l	99	71.994	Tetraodon_nigroviridis
ENSSHAG00000013509	HBS1L	100	80.786	ENSTBEG00000009950	HBS1L	100	80.786	Tupaia_belangeri
ENSSHAG00000013509	HBS1L	99	89.504	ENSTTRG00000003715	HBS1L	99	89.504	Tursiops_truncatus
ENSSHAG00000013509	HBS1L	100	90.539	ENSUAMG00000001064	HBS1L	100	90.539	Ursus_americanus
ENSSHAG00000013509	HBS1L	100	90.393	ENSUMAG00000024395	HBS1L	100	97.297	Ursus_maritimus
ENSSHAG00000013509	HBS1L	91	91.867	ENSVPAG00000006280	HBS1L	90	91.867	Vicugna_pacos
ENSSHAG00000013509	HBS1L	100	89.520	ENSVVUG00000000295	HBS1L	100	89.520	Vulpes_vulpes
ENSSHAG00000013509	HBS1L	100	76.093	ENSXETG00000003726	hbs1l	100	76.087	Xenopus_tropicalis
ENSSHAG00000013509	HBS1L	99	71.806	ENSXCOG00000005323	hbs1l	100	71.596	Xiphophorus_couchianus
ENSSHAG00000013509	HBS1L	100	70.538	ENSXMAG00000004359	hbs1l	100	70.538	Xiphophorus_maculatus