EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000013510 (Gene tree)
Gene ID: 100930115
Gene Symbol: -
Alias: GC20
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 1281 bases
Position: chrGL861690.1:1250319-1251599
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000015858	SUI1	PF01253.22	3.7e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000015987	-	342	-	ENSSHAP00000015858	113 (aa)	-	G3WKA3

Gene Model

Click here to download ENSSHAG00000013510's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000013510's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000013510	-	93	91.429	ENSSHAG00000008239	-	93	91.429
ENSSHAG00000013510	-	92	92.308	ENSSHAG00000005729	-	83	92.308
ENSSHAG00000013510	-	86	71.134	ENSSHAG00000015066	-	92	71.134
ENSSHAG00000013510	-	93	78.095	ENSSHAG00000012996	-	93	75.238

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000013510	-	93	99.048	ENSG00000114784	EIF1B	93	99.048	Homo_sapiens
ENSSHAG00000013510	-	93	99.048	ENSAMEG00000001679	EIF1B	93	99.048	Ailuropoda_melanoleuca
ENSSHAG00000013510	-	91	60.194	ENSACIG00000009618	zgc:56676	87	60.194	Amphilophus_citrinellus
ENSSHAG00000013510	-	92	98.077	ENSAPLG00000001143	EIF1B	91	98.077	Anas_platyrhynchos
ENSSHAG00000013510	-	91	100.000	ENSACAG00000017884	EIF1B	95	100.000	Anolis_carolinensis
ENSSHAG00000013510	-	93	99.048	ENSANAG00000026979	EIF1B	93	99.048	Aotus_nancymaae
ENSSHAG00000013510	-	93	95.238	ENSAMXG00000033877	zgc:56676	94	96.078	Astyanax_mexicanus
ENSSHAG00000013510	-	93	99.048	ENSBTAG00000019106	EIF1B	93	99.048	Bos_taurus
ENSSHAG00000013510	-	73	65.854	WBGene00020868	eif-1	75	65.854	Caenorhabditis_elegans
ENSSHAG00000013510	-	93	99.048	ENSCJAG00000046513	EIF1B	93	99.048	Callithrix_jacchus
ENSSHAG00000013510	-	51	91.379	ENSCAFG00000029183	EIF1B	68	97.872	Canis_familiaris
ENSSHAG00000013510	-	93	99.048	ENSCAFG00020025518	EIF1B	93	99.048	Canis_lupus_dingo
ENSSHAG00000013510	-	50	98.246	ENSCHIG00000022430	EIF1B	70	98.246	Capra_hircus
ENSSHAG00000013510	-	93	99.048	ENSTSYG00000006338	EIF1B	93	99.048	Carlito_syrichta
ENSSHAG00000013510	-	93	99.048	ENSCPOG00000035400	EIF1B	93	99.048	Cavia_porcellus
ENSSHAG00000013510	-	93	99.048	ENSCCAG00000031083	EIF1B	93	99.048	Cebus_capucinus
ENSSHAG00000013510	-	93	99.048	ENSCATG00000016704	EIF1B	93	99.048	Cercocebus_atys
ENSSHAG00000013510	-	90	100.000	ENSCLAG00000016040	EIF1B	100	100.000	Chinchilla_lanigera
ENSSHAG00000013510	-	93	99.048	ENSCSAG00000016916	EIF1B	93	99.048	Chlorocebus_sabaeus
ENSSHAG00000013510	-	90	98.039	ENSCHOG00000009555	EIF1B	100	98.039	Choloepus_hoffmanni
ENSSHAG00000013510	-	93	99.048	ENSCPBG00000000106	EIF1B	93	99.048	Chrysemys_picta_bellii
ENSSHAG00000013510	-	93	99.048	ENSCANG00000043425	EIF1B	93	99.048	Colobus_angolensis_palliatus
ENSSHAG00000013510	-	93	99.048	ENSCGRG00001004908	Eif1b	93	99.048	Cricetulus_griseus_chok1gshd
ENSSHAG00000013510	-	90	100.000	ENSCGRG00000013833	Eif1b	100	100.000	Cricetulus_griseus_crigri
ENSSHAG00000013510	-	93	96.190	ENSDARG00000029445	zgc:56676	93	96.190	Danio_rerio
ENSSHAG00000013510	-	91	100.000	ENSDORG00000025252	Eif1b	100	100.000	Dipodomys_ordii
ENSSHAG00000013510	-	93	99.048	ENSETEG00000017295	EIF1B	93	99.048	Echinops_telfairi
ENSSHAG00000013510	-	93	99.048	ENSEASG00005007609	EIF1B	93	99.048	Equus_asinus_asinus
ENSSHAG00000013510	-	93	99.048	ENSECAG00000005758	EIF1B	93	99.048	Equus_caballus
ENSSHAG00000013510	-	98	89.189	ENSELUG00000002720	zgc:56676	93	93.333	Esox_lucius
ENSSHAG00000013510	-	93	99.048	ENSFCAG00000003255	EIF1B	93	99.048	Felis_catus
ENSSHAG00000013510	-	90	99.020	ENSFALG00000012290	EIF1B	91	99.020	Ficedula_albicollis
ENSSHAG00000013510	-	93	99.048	ENSFDAG00000007219	EIF1B	93	99.048	Fukomys_damarensis
ENSSHAG00000013510	-	95	87.850	ENSGMOG00000009623	-	95	87.850	Gadus_morhua
ENSSHAG00000013510	-	93	98.095	ENSGALG00000038646	EIF1B	93	98.095	Gallus_gallus
ENSSHAG00000013510	-	93	99.048	ENSGAGG00000011376	EIF1B	93	99.048	Gopherus_agassizii
ENSSHAG00000013510	-	93	99.048	ENSGGOG00000008312	EIF1B	93	99.048	Gorilla_gorilla
ENSSHAG00000013510	-	93	99.048	ENSHGLG00100006444	EIF1B	93	99.048	Heterocephalus_glaber_male
ENSSHAG00000013510	-	95	71.963	ENSIPUG00000012511	-	94	71.963	Ictalurus_punctatus
ENSSHAG00000013510	-	93	99.048	ENSSTOG00000012168	EIF1B	93	99.048	Ictidomys_tridecemlineatus
ENSSHAG00000013510	-	90	98.039	ENSJJAG00000020423	Eif1b	100	98.039	Jaculus_jaculus
ENSSHAG00000013510	-	93	86.667	ENSLACG00000022678	zgc:56676	96	86.667	Latimeria_chalumnae
ENSSHAG00000013510	-	93	95.238	ENSLACG00000004014	-	93	95.238	Latimeria_chalumnae
ENSSHAG00000013510	-	93	97.143	ENSLOCG00000012941	EIF1B	83	97.143	Lepisosteus_oculatus
ENSSHAG00000013510	-	93	99.048	ENSLAFG00000001140	EIF1B	93	99.048	Loxodonta_africana
ENSSHAG00000013510	-	93	99.048	ENSMFAG00000037264	EIF1B	93	99.048	Macaca_fascicularis
ENSSHAG00000013510	-	93	99.048	ENSMMUG00000040036	EIF1B	93	99.048	Macaca_mulatta
ENSSHAG00000013510	-	93	99.048	ENSMNEG00000032776	EIF1B	93	99.048	Macaca_nemestrina
ENSSHAG00000013510	-	93	99.048	ENSMLEG00000033348	EIF1B	93	99.048	Mandrillus_leucophaeus
ENSSHAG00000013510	-	93	98.095	ENSMGAG00000011733	EIF1B	93	98.095	Meleagris_gallopavo
ENSSHAG00000013510	-	93	99.048	ENSMAUG00000016815	Eif1b	93	99.048	Mesocricetus_auratus
ENSSHAG00000013510	-	93	99.048	ENSMICG00000049308	EIF1B	93	99.048	Microcebus_murinus
ENSSHAG00000013510	-	93	97.170	ENSMOCG00000017712	-	93	97.170	Microtus_ochrogaster
ENSSHAG00000013510	-	93	99.048	ENSMOCG00000000649	-	93	99.048	Microtus_ochrogaster
ENSSHAG00000013510	-	91	55.340	ENSMMOG00000020133	zgc:56676	87	49.515	Mola_mola
ENSSHAG00000013510	-	93	99.048	ENSMODG00000011056	EIF1B	93	99.048	Monodelphis_domestica
ENSSHAG00000013510	-	91	72.816	ENSMODG00000002449	-	90	72.816	Monodelphis_domestica
ENSSHAG00000013510	-	93	99.048	MGP_CAROLIEiJ_G0032817	Eif1b	93	99.048	Mus_caroli
ENSSHAG00000013510	-	93	99.048	ENSMUSG00000006941	Eif1b	93	99.048	Mus_musculus
ENSSHAG00000013510	-	93	99.048	MGP_PahariEiJ_G0015684	Eif1b	93	99.048	Mus_pahari
ENSSHAG00000013510	-	93	99.048	MGP_SPRETEiJ_G0033965	Eif1b	93	99.048	Mus_spretus
ENSSHAG00000013510	-	93	99.048	ENSMPUG00000017958	EIF1B	93	99.048	Mustela_putorius_furo
ENSSHAG00000013510	-	93	99.048	ENSMLUG00000014425	EIF1B	93	99.048	Myotis_lucifugus
ENSSHAG00000013510	-	93	99.048	ENSNGAG00000006534	Eif1b	93	99.048	Nannospalax_galili
ENSSHAG00000013510	-	93	99.048	ENSNLEG00000005660	EIF1B	93	99.048	Nomascus_leucogenys
ENSSHAG00000013510	-	50	94.643	ENSMEUG00000007908	-	87	94.643	Notamacropus_eugenii
ENSSHAG00000013510	-	93	95.238	ENSMEUG00000005336	-	93	95.238	Notamacropus_eugenii
ENSSHAG00000013510	-	93	83.962	ENSOPRG00000001569	EIF1B	93	83.962	Ochotona_princeps
ENSSHAG00000013510	-	93	99.048	ENSODEG00000010883	EIF1B	93	99.048	Octodon_degus
ENSSHAG00000013510	-	92	99.038	ENSOANG00000003583	EIF1B	91	99.038	Ornithorhynchus_anatinus
ENSSHAG00000013510	-	93	99.048	ENSOGAG00000025224	EIF1B	93	99.048	Otolemur_garnettii
ENSSHAG00000013510	-	93	99.048	ENSOARG00000002622	EIF1B	93	99.048	Ovis_aries
ENSSHAG00000013510	-	93	99.048	ENSPPAG00000028080	EIF1B	93	99.048	Pan_paniscus
ENSSHAG00000013510	-	93	99.048	ENSPPRG00000003963	EIF1B	93	99.048	Panthera_pardus
ENSSHAG00000013510	-	95	96.262	ENSPTIG00000013646	EIF1B	90	100.000	Panthera_tigris_altaica
ENSSHAG00000013510	-	93	99.048	ENSPTRG00000014776	EIF1B	93	99.048	Pan_troglodytes
ENSSHAG00000013510	-	93	99.048	ENSPANG00000033825	EIF1B	93	99.048	Papio_anubis
ENSSHAG00000013510	-	93	98.095	ENSPKIG00000004040	zgc:56676	93	98.095	Paramormyrops_kingsleyae
ENSSHAG00000013510	-	92	98.077	ENSPSIG00000002437	EIF1B	100	98.077	Pelodiscus_sinensis
ENSSHAG00000013510	-	91	78.641	ENSPMGG00000006863	zgc:56676	91	78.641	Periophthalmus_magnuspinnatus
ENSSHAG00000013510	-	93	77.143	ENSPEMG00000016270	-	89	71.429	Peromyscus_maniculatus_bairdii
ENSSHAG00000013510	-	93	99.048	ENSPCIG00000016375	EIF1B	93	99.048	Phascolarctos_cinereus
ENSSHAG00000013510	-	93	99.048	ENSPPYG00000025897	EIF1B	93	99.048	Pongo_abelii
ENSSHAG00000013510	-	91	99.029	ENSPCAG00000015629	EIF1B	99	99.029	Procavia_capensis
ENSSHAG00000013510	-	93	99.048	ENSPCOG00000020355	EIF1B	93	99.048	Propithecus_coquereli
ENSSHAG00000013510	-	93	99.048	ENSPVAG00000013911	EIF1B	93	99.048	Pteropus_vampyrus
ENSSHAG00000013510	-	93	95.238	ENSPNAG00000023915	zgc:56676	93	95.238	Pygocentrus_nattereri
ENSSHAG00000013510	-	93	99.048	ENSRNOG00000018848	Eif1b	93	99.048	Rattus_norvegicus
ENSSHAG00000013510	-	93	99.048	ENSRBIG00000006994	EIF1B	93	99.048	Rhinopithecus_bieti
ENSSHAG00000013510	-	93	99.048	ENSRROG00000040263	EIF1B	93	99.048	Rhinopithecus_roxellana
ENSSHAG00000013510	-	92	99.038	ENSSBOG00000023951	EIF1B	78	99.038	Saimiri_boliviensis_boliviensis
ENSSHAG00000013510	-	93	98.095	ENSSFOG00015007208	zgc:56676	93	98.095	Scleropages_formosus
ENSSHAG00000013510	-	93	98.095	ENSSPUG00000002378	EIF1B	95	99.029	Sphenodon_punctatus
ENSSHAG00000013510	-	93	99.048	ENSSSCG00000011270	EIF1B	93	99.048	Sus_scrofa
ENSSHAG00000013510	-	93	97.143	ENSTGUG00000004677	EIF1B	91	97.143	Taeniopygia_guttata
ENSSHAG00000013510	-	93	97.143	ENSTBEG00000013185	EIF1B	93	97.143	Tupaia_belangeri
ENSSHAG00000013510	-	93	99.048	ENSTTRG00000000163	EIF1B	93	99.048	Tursiops_truncatus
ENSSHAG00000013510	-	82	97.849	ENSUAMG00000022317	EIF1B	85	97.849	Ursus_americanus
ENSSHAG00000013510	-	90	100.000	ENSUMAG00000004559	EIF1B	85	100.000	Ursus_maritimus
ENSSHAG00000013510	-	93	99.048	ENSVPAG00000000967	EIF1B	93	99.048	Vicugna_pacos
ENSSHAG00000013510	-	95	97.196	ENSVVUG00000005565	EIF1B	99	97.196	Vulpes_vulpes
ENSSHAG00000013510	-	93	97.143	ENSXETG00000000359	eif1b	93	97.143	Xenopus_tropicalis