EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000013524 (Gene tree)
Gene ID: 100924341
Gene Symbol: APEX1
Alias: APE|APE-1|APEN|APEX|APX|HAP1|REF-1|REF1
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 1523 bases
Position: chrGL834493.1:1252360-1253882
Accession: 587
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000015872	Exo_endo_phos	PF03372.23	7.5e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000016001	APEX1-201	975	-	ENSSHAP00000015872	324 (aa)	-	G3WKB7

Gene Model

Click here to download ENSSHAG00000013524's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03410	Base excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000013524's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000013524	APEX1	100	83.333	ENSG00000100823	APEX1	100	83.333	Homo_sapiens
ENSSHAG00000013524	APEX1	87	66.667	ENSAPOG00000017002	apex1	91	66.667	Acanthochromis_polyacanthus
ENSSHAG00000013524	APEX1	100	83.333	ENSAMEG00000005418	APEX1	100	83.333	Ailuropoda_melanoleuca
ENSSHAG00000013524	APEX1	85	70.036	ENSACIG00000010653	apex1	94	69.149	Amphilophus_citrinellus
ENSSHAG00000013524	APEX1	87	66.667	ENSAOCG00000009649	apex1	90	66.667	Amphiprion_ocellaris
ENSSHAG00000013524	APEX1	87	66.667	ENSAPEG00000021453	apex1	90	66.667	Amphiprion_percula
ENSSHAG00000013524	APEX1	85	69.928	ENSATEG00000002883	apex1	97	63.190	Anabas_testudineus
ENSSHAG00000013524	APEX1	100	66.667	ENSACAG00000008099	APEX1	100	66.667	Anolis_carolinensis
ENSSHAG00000013524	APEX1	100	83.951	ENSANAG00000030117	APEX1	100	83.951	Aotus_nancymaae
ENSSHAG00000013524	APEX1	85	68.592	ENSACLG00000018441	apex1	100	62.739	Astatotilapia_calliptera
ENSSHAG00000013524	APEX1	100	63.272	ENSAMXG00000034699	apex1	100	62.346	Astyanax_mexicanus
ENSSHAG00000013524	APEX1	100	83.333	ENSBTAG00000002745	APEX1	100	83.333	Bos_taurus
ENSSHAG00000013524	APEX1	79	44.788	WBGene00001372	exo-3	88	44.788	Caenorhabditis_elegans
ENSSHAG00000013524	APEX1	100	84.259	ENSCJAG00000009726	APEX1	100	84.259	Callithrix_jacchus
ENSSHAG00000013524	APEX1	100	83.025	ENSCAFG00000032033	APEX1	100	83.025	Canis_familiaris
ENSSHAG00000013524	APEX1	55	74.157	ENSCAFG00020023002	-	96	74.157	Canis_lupus_dingo
ENSSHAG00000013524	APEX1	100	83.025	ENSCAFG00020014377	-	100	83.025	Canis_lupus_dingo
ENSSHAG00000013524	APEX1	85	73.723	ENSCHIG00000014537	-	86	73.723	Capra_hircus
ENSSHAG00000013524	APEX1	100	83.025	ENSCHIG00000007298	-	100	83.025	Capra_hircus
ENSSHAG00000013524	APEX1	100	83.436	ENSTSYG00000034813	APEX1	100	82.099	Carlito_syrichta
ENSSHAG00000013524	APEX1	85	82.182	ENSCAPG00000016235	APEX1	91	90.254	Cavia_aperea
ENSSHAG00000013524	APEX1	100	83.129	ENSCPOG00000030909	APEX1	100	82.099	Cavia_porcellus
ENSSHAG00000013524	APEX1	100	72.699	ENSCCAG00000031931	-	100	72.699	Cebus_capucinus
ENSSHAG00000013524	APEX1	100	84.259	ENSCCAG00000033056	-	100	84.259	Cebus_capucinus
ENSSHAG00000013524	APEX1	100	84.356	ENSCATG00000015580	APEX1	100	83.333	Cercocebus_atys
ENSSHAG00000013524	APEX1	100	83.129	ENSCLAG00000001002	APEX1	100	81.790	Chinchilla_lanigera
ENSSHAG00000013524	APEX1	100	84.049	ENSCSAG00000016670	-	100	83.025	Chlorocebus_sabaeus
ENSSHAG00000013524	APEX1	100	84.049	ENSCSAG00000016685	-	100	83.025	Chlorocebus_sabaeus
ENSSHAG00000013524	APEX1	100	66.975	ENSCPBG00000009567	APEX1	100	66.975	Chrysemys_picta_bellii
ENSSHAG00000013524	APEX1	93	54.248	ENSCING00000008137	-	84	58.955	Ciona_intestinalis
ENSSHAG00000013524	APEX1	83	52.985	ENSCSAVG00000007144	-	100	53.435	Ciona_savignyi
ENSSHAG00000013524	APEX1	100	84.969	ENSCANG00000030726	APEX1	100	83.951	Colobus_angolensis_palliatus
ENSSHAG00000013524	APEX1	100	82.209	ENSCGRG00001017046	Apex1	100	80.864	Cricetulus_griseus_chok1gshd
ENSSHAG00000013524	APEX1	100	82.209	ENSCGRG00000008984	Apex1	100	80.864	Cricetulus_griseus_crigri
ENSSHAG00000013524	APEX1	99	62.112	ENSCSEG00000017499	apex1	89	65.957	Cynoglossus_semilaevis
ENSSHAG00000013524	APEX1	97	64.013	ENSCVAG00000022075	apex1	100	64.013	Cyprinodon_variegatus
ENSSHAG00000013524	APEX1	100	63.272	ENSDARG00000045843	apex1	100	63.272	Danio_rerio
ENSSHAG00000013524	APEX1	100	79.321	ENSDNOG00000042234	APEX1	95	79.321	Dasypus_novemcinctus
ENSSHAG00000013524	APEX1	100	84.356	ENSDORG00000001616	Apex1	100	83.025	Dipodomys_ordii
ENSSHAG00000013524	APEX1	100	83.642	ENSETEG00000004855	-	100	83.642	Echinops_telfairi
ENSSHAG00000013524	APEX1	73	63.866	ENSEBUG00000000622	-	91	63.866	Eptatretus_burgeri
ENSSHAG00000013524	APEX1	100	84.049	ENSEASG00005017489	APEX1	74	83.333	Equus_asinus_asinus
ENSSHAG00000013524	APEX1	100	84.049	ENSECAG00000022325	APEX1	82	83.333	Equus_caballus
ENSSHAG00000013524	APEX1	86	87.410	ENSEEUG00000012569	APEX1	95	87.681	Erinaceus_europaeus
ENSSHAG00000013524	APEX1	100	61.846	ENSELUG00000021706	apex1	100	61.846	Esox_lucius
ENSSHAG00000013524	APEX1	100	84.049	ENSFCAG00000030869	APEX1	100	82.716	Felis_catus
ENSSHAG00000013524	APEX1	100	83.436	ENSFDAG00000006120	APEX1	100	82.099	Fukomys_damarensis
ENSSHAG00000013524	APEX1	97	64.127	ENSFHEG00000009031	apex1	84	64.127	Fundulus_heteroclitus
ENSSHAG00000013524	APEX1	99	60.870	ENSGMOG00000007943	apex1	99	58.359	Gadus_morhua
ENSSHAG00000013524	APEX1	87	68.794	ENSGAFG00000005311	apex1	100	63.376	Gambusia_affinis
ENSSHAG00000013524	APEX1	97	62.540	ENSGACG00000019497	apex1	99	67.778	Gasterosteus_aculeatus
ENSSHAG00000013524	APEX1	100	66.358	ENSGAGG00000014999	APEX1	100	66.358	Gopherus_agassizii
ENSSHAG00000013524	APEX1	100	83.951	ENSGGOG00000002128	APEX1	100	83.951	Gorilla_gorilla
ENSSHAG00000013524	APEX1	85	68.592	ENSHBUG00000005894	apex1	99	62.270	Haplochromis_burtoni
ENSSHAG00000013524	APEX1	100	84.356	ENSHGLG00000002848	APEX1	100	83.025	Heterocephalus_glaber_female
ENSSHAG00000013524	APEX1	100	84.356	ENSHGLG00100017878	APEX1	100	83.025	Heterocephalus_glaber_male
ENSSHAG00000013524	APEX1	99	63.777	ENSHCOG00000009961	apex1	99	62.195	Hippocampus_comes
ENSSHAG00000013524	APEX1	100	64.506	ENSIPUG00000005799	apex1	100	62.310	Ictalurus_punctatus
ENSSHAG00000013524	APEX1	100	81.481	ENSSTOG00000010096	APEX1	100	81.481	Ictidomys_tridecemlineatus
ENSSHAG00000013524	APEX1	100	82.515	ENSJJAG00000012067	-	100	81.173	Jaculus_jaculus
ENSSHAG00000013524	APEX1	89	79.514	ENSJJAG00000020465	-	91	79.720	Jaculus_jaculus
ENSSHAG00000013524	APEX1	100	73.148	ENSJJAG00000003660	-	100	73.148	Jaculus_jaculus
ENSSHAG00000013524	APEX1	97	63.694	ENSKMAG00000021171	apex1	100	63.694	Kryptolebias_marmoratus
ENSSHAG00000013524	APEX1	97	61.465	ENSLBEG00000010248	apex1	100	61.465	Labrus_bergylta
ENSSHAG00000013524	APEX1	100	66.358	ENSLACG00000008617	APEX1	100	66.358	Latimeria_chalumnae
ENSSHAG00000013524	APEX1	100	66.049	ENSLOCG00000015516	apex1	99	65.741	Lepisosteus_oculatus
ENSSHAG00000013524	APEX1	100	83.333	ENSLAFG00000021872	APEX1	100	83.333	Loxodonta_africana
ENSSHAG00000013524	APEX1	100	84.356	ENSMFAG00000002565	APEX1	100	83.333	Macaca_fascicularis
ENSSHAG00000013524	APEX1	100	84.356	ENSMMUG00000048039	APEX1	100	83.333	Macaca_mulatta
ENSSHAG00000013524	APEX1	100	84.356	ENSMNEG00000036944	APEX1	100	83.951	Macaca_nemestrina
ENSSHAG00000013524	APEX1	100	84.356	ENSMLEG00000042125	APEX1	100	83.333	Mandrillus_leucophaeus
ENSSHAG00000013524	APEX1	97	64.127	ENSMAMG00000023526	apex1	100	64.013	Mastacembelus_armatus
ENSSHAG00000013524	APEX1	85	68.592	ENSMZEG00005014187	apex1	100	62.739	Maylandia_zebra
ENSSHAG00000013524	APEX1	100	82.154	ENSMAUG00000013994	Apex1	100	81.846	Mesocricetus_auratus
ENSSHAG00000013524	APEX1	100	83.436	ENSMICG00000043554	APEX1	100	82.407	Microcebus_murinus
ENSSHAG00000013524	APEX1	100	83.436	ENSMOCG00000013721	Apex1	100	83.025	Microtus_ochrogaster
ENSSHAG00000013524	APEX1	87	65.957	ENSMMOG00000010031	apex1	97	61.300	Mola_mola
ENSSHAG00000013524	APEX1	100	91.667	ENSMODG00000007125	APEX1	100	92.593	Monodelphis_domestica
ENSSHAG00000013524	APEX1	87	62.766	ENSMALG00000011699	apex1	75	62.766	Monopterus_albus
ENSSHAG00000013524	APEX1	99	83.692	MGP_CAROLIEiJ_G0019209	Apex1	99	82.663	Mus_caroli
ENSSHAG00000013524	APEX1	100	84.049	ENSMUSG00000035960	Apex1	100	83.333	Mus_musculus
ENSSHAG00000013524	APEX1	100	83.436	MGP_PahariEiJ_G0030232	Apex1	100	83.951	Mus_pahari
ENSSHAG00000013524	APEX1	100	84.049	MGP_SPRETEiJ_G0020101	Apex1	100	83.333	Mus_spretus
ENSSHAG00000013524	APEX1	100	83.232	ENSMLUG00000028957	APEX1	100	82.099	Myotis_lucifugus
ENSSHAG00000013524	APEX1	100	83.742	ENSNGAG00000002725	-	100	82.716	Nannospalax_galili
ENSSHAG00000013524	APEX1	97	64.241	ENSNGAG00000021748	-	95	63.057	Nannospalax_galili
ENSSHAG00000013524	APEX1	85	68.592	ENSNBRG00000005334	apex1	92	62.857	Neolamprologus_brichardi
ENSSHAG00000013524	APEX1	100	83.025	ENSNLEG00000010839	APEX1	100	83.025	Nomascus_leucogenys
ENSSHAG00000013524	APEX1	100	90.741	ENSMEUG00000014519	APEX1	100	88.272	Notamacropus_eugenii
ENSSHAG00000013524	APEX1	100	83.385	ENSOPRG00000014029	APEX1	100	83.385	Ochotona_princeps
ENSSHAG00000013524	APEX1	100	63.554	ENSODEG00000006583	-	100	62.727	Octodon_degus
ENSSHAG00000013524	APEX1	100	83.742	ENSODEG00000001703	-	100	82.407	Octodon_degus
ENSSHAG00000013524	APEX1	97	66.246	ENSODEG00000004777	-	99	64.127	Octodon_degus
ENSSHAG00000013524	APEX1	87	68.327	ENSONIG00000012089	apex1	100	63.376	Oreochromis_niloticus
ENSSHAG00000013524	APEX1	89	80.556	ENSOANG00000008836	APEX1	80	76.453	Ornithorhynchus_anatinus
ENSSHAG00000013524	APEX1	100	83.333	ENSOCUG00000005022	APEX1	100	83.333	Oryctolagus_cuniculus
ENSSHAG00000013524	APEX1	85	70.036	ENSORLG00000012378	apex1	99	63.889	Oryzias_latipes
ENSSHAG00000013524	APEX1	85	70.036	ENSORLG00020021371	apex1	99	63.889	Oryzias_latipes_hni
ENSSHAG00000013524	APEX1	85	70.036	ENSORLG00015020089	apex1	99	63.889	Oryzias_latipes_hsok
ENSSHAG00000013524	APEX1	87	68.440	ENSOMEG00000018876	apex1	99	62.963	Oryzias_melastigma
ENSSHAG00000013524	APEX1	97	75.873	ENSOGAG00000029355	-	100	75.238	Otolemur_garnettii
ENSSHAG00000013524	APEX1	100	84.663	ENSOGAG00000013335	-	100	83.642	Otolemur_garnettii
ENSSHAG00000013524	APEX1	100	82.407	ENSOARG00000019740	-	100	82.407	Ovis_aries
ENSSHAG00000013524	APEX1	99	72.050	ENSOARG00000014424	-	100	71.429	Ovis_aries
ENSSHAG00000013524	APEX1	97	79.936	ENSOARG00000001876	-	100	79.936	Ovis_aries
ENSSHAG00000013524	APEX1	100	83.642	ENSPPAG00000038760	APEX1	100	83.642	Pan_paniscus
ENSSHAG00000013524	APEX1	100	82.716	ENSPPRG00000011794	APEX1	100	82.716	Panthera_pardus
ENSSHAG00000013524	APEX1	100	84.049	ENSPTIG00000014829	APEX1	100	82.716	Panthera_tigris_altaica
ENSSHAG00000013524	APEX1	100	83.642	ENSPTRG00000006093	APEX1	100	83.642	Pan_troglodytes
ENSSHAG00000013524	APEX1	100	84.356	ENSPANG00000022757	APEX1	100	83.333	Papio_anubis
ENSSHAG00000013524	APEX1	85	68.953	ENSPKIG00000003504	apex1	100	62.346	Paramormyrops_kingsleyae
ENSSHAG00000013524	APEX1	96	53.963	ENSPMGG00000016596	apex1	73	65.714	Periophthalmus_magnuspinnatus
ENSSHAG00000013524	APEX1	100	83.742	ENSPEMG00000019097	Apex1	100	82.716	Peromyscus_maniculatus_bairdii
ENSSHAG00000013524	APEX1	93	65.894	ENSPMAG00000007275	-	95	67.606	Petromyzon_marinus
ENSSHAG00000013524	APEX1	100	92.593	ENSPCIG00000023274	APEX1	100	94.136	Phascolarctos_cinereus
ENSSHAG00000013524	APEX1	87	69.149	ENSPFOG00000004178	apex1	100	63.694	Poecilia_formosa
ENSSHAG00000013524	APEX1	87	68.794	ENSPLAG00000012779	apex1	100	63.376	Poecilia_latipinna
ENSSHAG00000013524	APEX1	87	69.149	ENSPMEG00000019623	apex1	100	63.694	Poecilia_mexicana
ENSSHAG00000013524	APEX1	87	68.440	ENSPREG00000014298	apex1	100	62.857	Poecilia_reticulata
ENSSHAG00000013524	APEX1	100	83.025	ENSPPYG00000005565	APEX1	100	83.025	Pongo_abelii
ENSSHAG00000013524	APEX1	100	81.902	ENSPCAG00000010376	APEX1	100	81.481	Procavia_capensis
ENSSHAG00000013524	APEX1	100	83.436	ENSPCOG00000021564	APEX1	100	82.407	Propithecus_coquereli
ENSSHAG00000013524	APEX1	100	83.537	ENSPVAG00000010736	APEX1	100	82.716	Pteropus_vampyrus
ENSSHAG00000013524	APEX1	85	68.953	ENSPNYG00000023940	apex1	100	63.057	Pundamilia_nyererei
ENSSHAG00000013524	APEX1	93	61.462	ENSPNAG00000020897	apex1	85	65.891	Pygocentrus_nattereri
ENSSHAG00000013524	APEX1	100	83.129	ENSRNOG00000009663	Apex1	100	82.099	Rattus_norvegicus
ENSSHAG00000013524	APEX1	100	84.663	ENSRBIG00000038325	APEX1	99	83.642	Rhinopithecus_bieti
ENSSHAG00000013524	APEX1	100	74.074	ENSSBOG00000031372	-	100	73.765	Saimiri_boliviensis_boliviensis
ENSSHAG00000013524	APEX1	100	83.951	ENSSBOG00000018921	-	100	83.951	Saimiri_boliviensis_boliviensis
ENSSHAG00000013524	APEX1	85	66.426	ENSSFOG00015001948	apex1	100	61.111	Scleropages_formosus
ENSSHAG00000013524	APEX1	85	68.231	ENSSMAG00000013348	apex1	99	62.112	Scophthalmus_maximus
ENSSHAG00000013524	APEX1	97	62.857	ENSSDUG00000016377	apex1	100	62.857	Seriola_dumerili
ENSSHAG00000013524	APEX1	97	63.057	ENSSLDG00000023005	apex1	100	63.057	Seriola_lalandi_dorsalis
ENSSHAG00000013524	APEX1	92	69.463	ENSSPUG00000000531	APEX1	95	70.877	Sphenodon_punctatus
ENSSHAG00000013524	APEX1	87	67.730	ENSSPAG00000000458	apex1	91	67.730	Stegastes_partitus
ENSSHAG00000013524	APEX1	95	50.318	ENSSSCG00000039705	-	92	53.659	Sus_scrofa
ENSSHAG00000013524	APEX1	100	82.407	ENSSSCG00000040060	-	100	82.407	Sus_scrofa
ENSSHAG00000013524	APEX1	73	61.441	ENSTGUG00000014378	APEX1	100	61.441	Taeniopygia_guttata
ENSSHAG00000013524	APEX1	85	66.426	ENSTRUG00000004268	apex1	95	60.991	Takifugu_rubripes
ENSSHAG00000013524	APEX1	97	62.739	ENSTNIG00000005778	apex1	99	61.491	Tetraodon_nigroviridis
ENSSHAG00000013524	APEX1	100	79.630	ENSTBEG00000006405	APEX1	100	79.630	Tupaia_belangeri
ENSSHAG00000013524	APEX1	73	89.407	ENSTTRG00000007860	APEX1	100	89.407	Tursiops_truncatus
ENSSHAG00000013524	APEX1	100	83.742	ENSUAMG00000010457	APEX1	100	82.716	Ursus_americanus
ENSSHAG00000013524	APEX1	100	83.742	ENSUMAG00000009178	APEX1	100	82.716	Ursus_maritimus
ENSSHAG00000013524	APEX1	73	83.898	ENSVPAG00000005083	APEX1	100	83.898	Vicugna_pacos
ENSSHAG00000013524	APEX1	100	83.025	ENSVVUG00000009010	APEX1	100	83.025	Vulpes_vulpes
ENSSHAG00000013524	APEX1	100	65.123	ENSXETG00000024773	apex1	100	65.123	Xenopus_tropicalis
ENSSHAG00000013524	APEX1	99	63.665	ENSXCOG00000015233	apex1	99	63.665	Xiphophorus_couchianus
ENSSHAG00000013524	APEX1	99	63.665	ENSXMAG00000006195	apex1	99	63.665	Xiphophorus_maculatus