EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000013584 (Gene tree)
Gene ID: 100934522
Gene Symbol: RDM1
Alias: MGC33977|RAD52B
Full Name: RAD52 motif containing 1
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 22484 bases
Position: chrGL856830.1:1268651-1291134
Accession: 100934522
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000015952	RRM_1	PF00076.22	5.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000016083	RDM1-201	822	-	ENSSHAP00000015952	273 (aa)	XP_003768460	G3WKJ7

Gene Model

Click here to download ENSSHAG00000013584's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000013584's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000013584	RDM1	100	67.029	ENSG00000278023	RDM1	96	75.758	Homo_sapiens
ENSSHAG00000013584	RDM1	94	36.260	ENSAPOG00000021886	zgc:103564	94	36.260	Acanthochromis_polyacanthus
ENSSHAG00000013584	RDM1	90	38.735	ENSAPEG00000008929	zgc:103564	92	38.735	Amphiprion_percula
ENSSHAG00000013584	RDM1	89	56.680	ENSAPLG00000004384	RDM1	94	56.680	Anas_platyrhynchos
ENSSHAG00000013584	RDM1	100	50.177	ENSACAG00000012989	-	100	50.530	Anolis_carolinensis
ENSSHAG00000013584	RDM1	100	67.754	ENSANAG00000032752	RDM1	95	75.758	Aotus_nancymaae
ENSSHAG00000013584	RDM1	100	68.953	ENSBTAG00000000030	RDM1	97	68.953	Bos_taurus
ENSSHAG00000013584	RDM1	92	67.589	ENSCJAG00000015031	RDM1	95	75.758	Callithrix_jacchus
ENSSHAG00000013584	RDM1	91	63.281	ENSCAFG00000015160	-	100	63.281	Canis_familiaris
ENSSHAG00000013584	RDM1	100	70.036	ENSCHIG00000020607	RDM1	98	70.036	Capra_hircus
ENSSHAG00000013584	RDM1	100	55.797	ENSCPOG00000001495	-	96	55.797	Cavia_porcellus
ENSSHAG00000013584	RDM1	99	65.809	ENSCCAG00000035763	RDM1	95	74.242	Cebus_capucinus
ENSSHAG00000013584	RDM1	100	66.667	ENSCATG00000044451	RDM1	95	75.000	Cercocebus_atys
ENSSHAG00000013584	RDM1	94	62.308	ENSCSAG00000006209	RDM1	97	62.308	Chlorocebus_sabaeus
ENSSHAG00000013584	RDM1	88	57.787	ENSCPBG00000009105	RDM1	93	58.607	Chrysemys_picta_bellii
ENSSHAG00000013584	RDM1	100	65.942	ENSCANG00000041322	RDM1	97	65.942	Colobus_angolensis_palliatus
ENSSHAG00000013584	RDM1	99	65.441	ENSCGRG00001015927	Rdm1	97	65.580	Cricetulus_griseus_chok1gshd
ENSSHAG00000013584	RDM1	92	37.795	ENSCVAG00000001956	zgc:103564	98	37.269	Cyprinodon_variegatus
ENSSHAG00000013584	RDM1	89	69.796	ENSDNOG00000045224	-	91	69.796	Dasypus_novemcinctus
ENSSHAG00000013584	RDM1	70	71.282	ENSEASG00005010554	RDM1	69	71.282	Equus_asinus_asinus
ENSSHAG00000013584	RDM1	93	69.084	ENSECAG00000022182	RDM1	93	69.084	Equus_caballus
ENSSHAG00000013584	RDM1	88	63.786	ENSEEUG00000006127	RDM1	97	63.786	Erinaceus_europaeus
ENSSHAG00000013584	RDM1	83	70.925	ENSFCAG00000043429	RDM1	95	78.788	Felis_catus
ENSSHAG00000013584	RDM1	100	56.159	ENSGALG00000000243	RDM1	97	56.159	Gallus_gallus
ENSSHAG00000013584	RDM1	89	58.130	ENSGAGG00000000293	-	78	58.943	Gopherus_agassizii
ENSSHAG00000013584	RDM1	100	67.391	ENSGGOG00000010584	RDM1	95	75.758	Gorilla_gorilla
ENSSHAG00000013584	RDM1	85	39.744	ENSHCOG00000002518	-	85	39.744	Hippocampus_comes
ENSSHAG00000013584	RDM1	100	66.304	ENSSTOG00000022491	RDM1	97	66.304	Ictidomys_tridecemlineatus
ENSSHAG00000013584	RDM1	100	66.065	ENSLAFG00000029300	RDM1	97	66.065	Loxodonta_africana
ENSSHAG00000013584	RDM1	100	66.304	ENSMFAG00000032968	RDM1	95	75.000	Macaca_fascicularis
ENSSHAG00000013584	RDM1	100	66.667	ENSMMUG00000006847	RDM1	97	66.667	Macaca_mulatta
ENSSHAG00000013584	RDM1	100	66.304	ENSMNEG00000039977	RDM1	95	75.000	Macaca_nemestrina
ENSSHAG00000013584	RDM1	100	66.304	ENSMLEG00000041158	RDM1	97	66.304	Mandrillus_leucophaeus
ENSSHAG00000013584	RDM1	89	54.694	ENSMGAG00000008774	RDM1	96	54.694	Meleagris_gallopavo
ENSSHAG00000013584	RDM1	100	66.545	ENSMAUG00000018559	Rdm1	97	66.545	Mesocricetus_auratus
ENSSHAG00000013584	RDM1	100	70.909	ENSMICG00000038651	RDM1	97	70.909	Microcebus_murinus
ENSSHAG00000013584	RDM1	99	63.768	ENSMOCG00000015095	Rdm1	99	63.768	Microtus_ochrogaster
ENSSHAG00000013584	RDM1	100	80.292	ENSMODG00000011101	RDM1	100	80.292	Monodelphis_domestica
ENSSHAG00000013584	RDM1	100	64.130	MGP_CAROLIEiJ_G0017226	Rdm1	97	64.130	Mus_caroli
ENSSHAG00000013584	RDM1	100	64.130	ENSMUSG00000010362	Rdm1	97	64.130	Mus_musculus
ENSSHAG00000013584	RDM1	100	63.406	MGP_PahariEiJ_G0018356	Rdm1	97	63.406	Mus_pahari
ENSSHAG00000013584	RDM1	100	63.768	MGP_SPRETEiJ_G0018069	Rdm1	97	63.768	Mus_spretus
ENSSHAG00000013584	RDM1	100	67.986	ENSMPUG00000008363	RDM1	97	67.986	Mustela_putorius_furo
ENSSHAG00000013584	RDM1	100	67.754	ENSNLEG00000014173	RDM1	97	67.754	Nomascus_leucogenys
ENSSHAG00000013584	RDM1	91	83.871	ENSMEUG00000015826	RDM1	100	83.871	Notamacropus_eugenii
ENSSHAG00000013584	RDM1	93	67.954	ENSOCUG00000022704	RDM1	100	67.954	Oryctolagus_cuniculus
ENSSHAG00000013584	RDM1	100	68.841	ENSOGAG00000011332	RDM1	97	68.841	Otolemur_garnettii
ENSSHAG00000013584	RDM1	100	67.754	ENSPPAG00000029969	RDM1	97	67.754	Pan_paniscus
ENSSHAG00000013584	RDM1	100	67.754	ENSPTRG00000009031	RDM1	95	76.515	Pan_troglodytes
ENSSHAG00000013584	RDM1	100	66.304	ENSPANG00000022933	RDM1	95	74.242	Papio_anubis
ENSSHAG00000013584	RDM1	99	65.074	ENSPEMG00000018985	Rdm1	98	65.217	Peromyscus_maniculatus_bairdii
ENSSHAG00000013584	RDM1	100	66.909	ENSPPYG00000008198	RDM1	97	66.909	Pongo_abelii
ENSSHAG00000013584	RDM1	100	67.754	ENSPCOG00000017995	RDM1	95	73.485	Propithecus_coquereli
ENSSHAG00000013584	RDM1	91	69.323	ENSPVAG00000001116	RDM1	100	69.323	Pteropus_vampyrus
ENSSHAG00000013584	RDM1	100	64.130	ENSRNOG00000020751	Rdm1	97	64.130	Rattus_norvegicus
ENSSHAG00000013584	RDM1	100	66.667	ENSRBIG00000030000	RDM1	95	74.242	Rhinopithecus_bieti
ENSSHAG00000013584	RDM1	100	66.667	ENSRROG00000035242	RDM1	97	66.667	Rhinopithecus_roxellana
ENSSHAG00000013584	RDM1	94	54.231	ENSSPUG00000010941	RDM1	94	54.231	Sphenodon_punctatus
ENSSHAG00000013584	RDM1	99	38.745	ENSSPAG00000011690	-	98	38.745	Stegastes_partitus
ENSSHAG00000013584	RDM1	82	61.504	ENSSSCG00000017574	-	94	61.504	Sus_scrofa
ENSSHAG00000013584	RDM1	88	50.206	ENSTBEG00000010030	RDM1	97	50.206	Tupaia_belangeri
ENSSHAG00000013584	RDM1	100	70.652	ENSUAMG00000027279	RDM1	97	70.652	Ursus_americanus
ENSSHAG00000013584	RDM1	100	70.652	ENSUMAG00000015423	RDM1	95	70.652	Ursus_maritimus