EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000013616 (Gene tree)
Gene ID: 100928479
Gene Symbol: -
Alias: HNRPDL|JKTBP|laAUF1
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 3323 bases
Position: chrGL864752.1:1274892-1278214
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000015991	RRM_1	PF00076.22	1.2e-33	1	2
ENSSHAP00000015991	RRM_1	PF00076.22	1.2e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000016123	-	1128	-	ENSSHAP00000015991	375 (aa)	-	G3WKN6

Gene Model

Click here to download ENSSHAG00000013616's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000013616's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000013616	-	73	59.420	ENSSHAG00000015802	-	100	58.781
ENSSHAG00000013616	-	75	63.345	ENSSHAG00000013312	HNRNPD	98	62.676
ENSSHAG00000013616	-	62	42.083	ENSSHAG00000008672	MSI2	52	56.471
ENSSHAG00000013616	-	54	49.541	ENSSHAG00000000936	-	85	49.083

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000013616	-	100	93.915	ENSG00000152795	HNRNPDL	100	99.003	Homo_sapiens
ENSSHAG00000013616	-	100	86.400	ENSAMEG00000005145	-	89	86.133	Ailuropoda_melanoleuca
ENSSHAG00000013616	-	80	76.568	ENSAMEG00000007660	-	100	74.587	Ailuropoda_melanoleuca
ENSSHAG00000013616	-	82	94.697	ENSAPLG00000011774	HNRNPDL	99	94.697	Anas_platyrhynchos
ENSSHAG00000013616	-	78	92.784	ENSACAG00000010416	HNRNPDL	92	92.466	Anolis_carolinensis
ENSSHAG00000013616	-	89	88.690	ENSANAG00000030316	-	96	83.333	Aotus_nancymaae
ENSSHAG00000013616	-	80	91.060	ENSANAG00000038001	-	100	90.397	Aotus_nancymaae
ENSSHAG00000013616	-	100	94.180	ENSANAG00000029054	HNRNPDL	90	94.709	Aotus_nancymaae
ENSSHAG00000013616	-	81	78.543	ENSANAG00000035255	-	99	77.733	Aotus_nancymaae
ENSSHAG00000013616	-	80	86.047	ENSANAG00000035355	-	100	86.047	Aotus_nancymaae
ENSSHAG00000013616	-	82	73.559	ENSAMXG00000001495	hnrnpdl	96	76.289	Astyanax_mexicanus
ENSSHAG00000013616	-	100	93.931	ENSBTAG00000014804	HNRNPDL	90	94.709	Bos_taurus
ENSSHAG00000013616	-	65	90.612	ENSCJAG00000045227	-	81	90.749	Callithrix_jacchus
ENSSHAG00000013616	-	100	94.709	ENSCJAG00000015197	-	90	95.238	Callithrix_jacchus
ENSSHAG00000013616	-	77	84.028	ENSCAFG00000000776	-	100	84.028	Canis_familiaris
ENSSHAG00000013616	-	100	94.444	ENSCAFG00000008940	HNRNPDL	90	94.974	Canis_familiaris
ENSSHAG00000013616	-	100	94.444	ENSCAFG00020010699	-	90	94.974	Canis_lupus_dingo
ENSSHAG00000013616	-	100	93.931	ENSCHIG00000010260	-	90	94.709	Capra_hircus
ENSSHAG00000013616	-	64	78.512	ENSCHIG00000026667	-	63	78.855	Capra_hircus
ENSSHAG00000013616	-	77	81.597	ENSTSYG00000036907	-	100	81.597	Carlito_syrichta
ENSSHAG00000013616	-	82	98.529	ENSTSYG00000031074	-	100	98.529	Carlito_syrichta
ENSSHAG00000013616	-	72	82.900	ENSCAPG00000015955	-	100	82.900	Cavia_aperea
ENSSHAG00000013616	-	100	90.476	ENSCPOG00000015619	-	90	90.476	Cavia_porcellus
ENSSHAG00000013616	-	55	93.976	ENSCCAG00000020531	-	77	93.976	Cebus_capucinus
ENSSHAG00000013616	-	100	93.915	ENSCCAG00000020777	HNRNPDL	90	94.444	Cebus_capucinus
ENSSHAG00000013616	-	55	94.634	ENSCATG00000030349	-	91	94.634	Cercocebus_atys
ENSSHAG00000013616	-	100	87.037	ENSCATG00000038573	-	80	100.000	Cercocebus_atys
ENSSHAG00000013616	-	80	74.751	ENSCLAG00000010786	-	100	74.751	Chinchilla_lanigera
ENSSHAG00000013616	-	100	94.459	ENSCLAG00000008428	HNRNPDL	90	94.459	Chinchilla_lanigera
ENSSHAG00000013616	-	100	94.180	ENSCSAG00000004461	HNRNPDL	90	94.709	Chlorocebus_sabaeus
ENSSHAG00000013616	-	78	97.945	ENSCHOG00000000160	-	100	97.945	Choloepus_hoffmanni
ENSSHAG00000013616	-	89	92.560	ENSCHOG00000010831	-	99	92.470	Choloepus_hoffmanni
ENSSHAG00000013616	-	82	95.057	ENSCHOG00000009204	-	100	95.057	Choloepus_hoffmanni
ENSSHAG00000013616	-	89	91.369	ENSCHOG00000003275	-	99	86.145	Choloepus_hoffmanni
ENSSHAG00000013616	-	75	96.691	ENSCHOG00000002938	-	100	96.691	Choloepus_hoffmanni
ENSSHAG00000013616	-	80	93.729	ENSCPBG00000008014	HNRNPDL	100	93.729	Chrysemys_picta_bellii
ENSSHAG00000013616	-	82	99.632	ENSCANG00000020228	-	100	99.632	Colobus_angolensis_palliatus
ENSSHAG00000013616	-	98	93.548	ENSCGRG00001010960	Hnrnpdl	86	99.265	Cricetulus_griseus_chok1gshd
ENSSHAG00000013616	-	75	99.265	ENSCGRG00000011361	-	96	99.265	Cricetulus_griseus_crigri
ENSSHAG00000013616	-	82	74.061	ENSDARG00000003429	hnrnpdl	97	76.174	Danio_rerio
ENSSHAG00000013616	-	82	94.498	ENSDNOG00000018280	-	100	94.498	Dasypus_novemcinctus
ENSSHAG00000013616	-	100	94.180	ENSDNOG00000003887	-	90	94.180	Dasypus_novemcinctus
ENSSHAG00000013616	-	73	65.108	ENSDNOG00000034016	-	96	64.158	Dasypus_novemcinctus
ENSSHAG00000013616	-	50	74.479	ENSDNOG00000046422	-	99	74.479	Dasypus_novemcinctus
ENSSHAG00000013616	-	79	93.624	ENSDNOG00000033760	-	96	93.624	Dasypus_novemcinctus
ENSSHAG00000013616	-	58	100.000	ENSDNOG00000033765	-	90	98.469	Dasypus_novemcinctus
ENSSHAG00000013616	-	80	90.033	ENSDORG00000024157	-	100	90.033	Dipodomys_ordii
ENSSHAG00000013616	-	100	93.915	ENSDORG00000000968	-	90	94.180	Dipodomys_ordii
ENSSHAG00000013616	-	62	64.807	ENSETEG00000010820	-	100	63.519	Echinops_telfairi
ENSSHAG00000013616	-	86	49.558	ENSEASG00005012961	-	85	57.658	Equus_asinus_asinus
ENSSHAG00000013616	-	100	94.180	ENSEASG00005016276	-	90	94.709	Equus_asinus_asinus
ENSSHAG00000013616	-	86	49.847	ENSECAG00000040564	-	87	53.731	Equus_caballus
ENSSHAG00000013616	-	100	93.668	ENSECAG00000022692	HNRNPDL	90	94.444	Equus_caballus
ENSSHAG00000013616	-	100	91.557	ENSEEUG00000004301	-	91	91.557	Erinaceus_europaeus
ENSSHAG00000013616	-	82	77.133	ENSELUG00000003241	hnrnpdl	97	77.133	Esox_lucius
ENSSHAG00000013616	-	100	93.915	ENSFCAG00000000455	HNRNPDL	90	94.444	Felis_catus
ENSSHAG00000013616	-	80	93.046	ENSFALG00000005709	HNRNPDL	100	93.046	Ficedula_albicollis
ENSSHAG00000013616	-	82	99.634	ENSFDAG00000000851	-	99	99.634	Fukomys_damarensis
ENSSHAG00000013616	-	55	54.854	ENSFDAG00000002891	-	50	58.791	Fukomys_damarensis
ENSSHAG00000013616	-	80	93.377	ENSGALG00000023199	HNRNPDL	100	93.377	Gallus_gallus
ENSSHAG00000013616	-	80	93.729	ENSGAGG00000003646	HNRNPDL	100	93.729	Gopherus_agassizii
ENSSHAG00000013616	-	100	93.386	ENSGGOG00000003714	HNRNPDL	90	93.915	Gorilla_gorilla
ENSSHAG00000013616	-	71	94.776	ENSHGLG00000013420	-	90	94.776	Heterocephalus_glaber_female
ENSSHAG00000013616	-	100	93.947	ENSHGLG00000015791	HNRNPDL	90	93.947	Heterocephalus_glaber_female
ENSSHAG00000013616	-	89	75.150	ENSHGLG00000014427	-	88	95.408	Heterocephalus_glaber_female
ENSSHAG00000013616	-	86	78.505	ENSHGLG00100019080	-	99	78.505	Heterocephalus_glaber_male
ENSSHAG00000013616	-	80	81.063	ENSHGLG00100016282	-	100	81.063	Heterocephalus_glaber_male
ENSSHAG00000013616	-	89	94.412	ENSHGLG00100005262	HNRNPDL	98	94.311	Heterocephalus_glaber_male
ENSSHAG00000013616	-	80	82.781	ENSHGLG00100017644	-	100	79.801	Heterocephalus_glaber_male
ENSSHAG00000013616	-	76	78.671	ENSHGLG00100010072	-	93	76.573	Heterocephalus_glaber_male
ENSSHAG00000013616	-	82	71.821	ENSIPUG00000024951	hnrnpdl	96	74.227	Ictalurus_punctatus
ENSSHAG00000013616	-	100	93.915	ENSSTOG00000013979	HNRNPDL	90	94.180	Ictidomys_tridecemlineatus
ENSSHAG00000013616	-	67	100.000	ENSJJAG00000000674	-	91	67.470	Jaculus_jaculus
ENSSHAG00000013616	-	100	93.122	ENSJJAG00000021673	Hnrnpdl	89	93.386	Jaculus_jaculus
ENSSHAG00000013616	-	53	100.000	ENSLACG00000003613	HNRNPDL	85	100.000	Latimeria_chalumnae
ENSSHAG00000013616	-	78	78.498	ENSLOCG00000010736	hnrnpdl	97	78.157	Lepisosteus_oculatus
ENSSHAG00000013616	-	72	51.481	ENSLAFG00000031444	-	72	58.763	Loxodonta_africana
ENSSHAG00000013616	-	100	93.386	ENSLAFG00000008612	HNRNPDL	91	99.265	Loxodonta_africana
ENSSHAG00000013616	-	100	93.915	ENSMFAG00000002275	HNRNPDL	90	94.444	Macaca_fascicularis
ENSSHAG00000013616	-	75	99.537	ENSMMUG00000015777	HNRNPDL	100	99.537	Macaca_mulatta
ENSSHAG00000013616	-	100	93.915	ENSMNEG00000045130	HNRNPDL	90	94.444	Macaca_nemestrina
ENSSHAG00000013616	-	80	99.003	ENSMLEG00000041600	HNRNPDL	100	99.003	Mandrillus_leucophaeus
ENSSHAG00000013616	-	80	94.684	ENSMLEG00000014825	-	100	94.684	Mandrillus_leucophaeus
ENSSHAG00000013616	-	82	92.647	ENSMGAG00000008033	HNRNPDL	100	92.647	Meleagris_gallopavo
ENSSHAG00000013616	-	100	94.149	ENSMAUG00000011132	Hnrnpdl	86	98.897	Mesocricetus_auratus
ENSSHAG00000013616	-	100	90.314	ENSMICG00000001445	-	90	92.932	Microcebus_murinus
ENSSHAG00000013616	-	55	95.673	ENSMICG00000037040	-	89	95.408	Microcebus_murinus
ENSSHAG00000013616	-	100	92.348	ENSMOCG00000015928	Hnrnpdl	90	93.140	Microtus_ochrogaster
ENSSHAG00000013616	-	59	100.000	ENSMODG00000006825	-	91	100.000	Monodelphis_domestica
ENSSHAG00000013616	-	100	99.733	ENSMODG00000011916	-	90	99.733	Monodelphis_domestica
ENSSHAG00000013616	-	100	93.122	ENSMUSG00000029328	Hnrnpdl	99	95.625	Mus_musculus
ENSSHAG00000013616	-	100	92.857	MGP_PahariEiJ_G0017226	Hnrnpdl	99	95.312	Mus_pahari
ENSSHAG00000013616	-	100	93.122	MGP_SPRETEiJ_G0028445	Hnrnpdl	99	95.625	Mus_spretus
ENSSHAG00000013616	-	82	99.620	ENSMPUG00000014753	-	99	99.620	Mustela_putorius_furo
ENSSHAG00000013616	-	77	75.958	ENSMPUG00000006259	-	100	75.958	Mustela_putorius_furo
ENSSHAG00000013616	-	85	90.536	ENSMPUG00000009986	-	97	90.536	Mustela_putorius_furo
ENSSHAG00000013616	-	72	73.764	ENSMPUG00000011188	-	99	70.229	Mustela_putorius_furo
ENSSHAG00000013616	-	81	71.053	ENSMLUG00000025989	-	95	67.905	Myotis_lucifugus
ENSSHAG00000013616	-	100	94.695	ENSMLUG00000014452	-	90	95.491	Myotis_lucifugus
ENSSHAG00000013616	-	77	46.488	ENSMLUG00000030192	-	63	58.470	Myotis_lucifugus
ENSSHAG00000013616	-	100	94.415	ENSNGAG00000015740	Hnrnpdl	90	94.415	Nannospalax_galili
ENSSHAG00000013616	-	100	94.180	ENSNLEG00000008636	HNRNPDL	89	98.500	Nomascus_leucogenys
ENSSHAG00000013616	-	89	81.325	ENSMEUG00000010033	HNRNPDL	98	81.402	Notamacropus_eugenii
ENSSHAG00000013616	-	65	98.760	ENSMEUG00000011454	-	100	98.760	Notamacropus_eugenii
ENSSHAG00000013616	-	82	98.529	ENSOPRG00000007178	-	100	98.529	Ochotona_princeps
ENSSHAG00000013616	-	80	92.691	ENSODEG00000004187	-	100	92.691	Octodon_degus
ENSSHAG00000013616	-	94	93.017	ENSODEG00000002106	-	83	92.705	Octodon_degus
ENSSHAG00000013616	-	90	91.279	ENSODEG00000020231	-	95	91.642	Octodon_degus
ENSSHAG00000013616	-	79	94.966	ENSODEG00000003135	-	100	94.966	Octodon_degus
ENSSHAG00000013616	-	92	85.797	ENSODEG00000000376	-	86	91.318	Octodon_degus
ENSSHAG00000013616	-	82	99.631	ENSOANG00000004651	HNRNPDL	100	99.631	Ornithorhynchus_anatinus
ENSSHAG00000013616	-	100	93.333	ENSOCUG00000013805	-	91	93.333	Oryctolagus_cuniculus
ENSSHAG00000013616	-	58	57.078	ENSOCUG00000025252	-	88	60.417	Oryctolagus_cuniculus
ENSSHAG00000013616	-	53	88.832	ENSOGAG00000031703	-	81	90.710	Otolemur_garnettii
ENSSHAG00000013616	-	100	91.534	ENSOGAG00000002501	-	90	92.857	Otolemur_garnettii
ENSSHAG00000013616	-	79	51.000	ENSOGAG00000024995	-	66	64.249	Otolemur_garnettii
ENSSHAG00000013616	-	54	95.556	ENSOARG00000011472	-	68	95.376	Ovis_aries
ENSSHAG00000013616	-	84	88.571	ENSOARG00000000824	-	92	88.571	Ovis_aries
ENSSHAG00000013616	-	70	75.564	ENSOARG00000002402	-	89	75.581	Ovis_aries
ENSSHAG00000013616	-	100	93.915	ENSPPAG00000043177	HNRNPDL	90	94.444	Pan_paniscus
ENSSHAG00000013616	-	100	94.180	ENSPPRG00000013787	HNRNPDL	90	94.709	Panthera_pardus
ENSSHAG00000013616	-	80	99.003	ENSPTIG00000018505	HNRNPDL	100	99.003	Panthera_tigris_altaica
ENSSHAG00000013616	-	100	93.915	ENSPTRG00000016217	HNRNPDL	90	94.444	Pan_troglodytes
ENSSHAG00000013616	-	100	94.180	ENSPANG00000004761	HNRNPDL	90	94.709	Papio_anubis
ENSSHAG00000013616	-	82	77.891	ENSPKIG00000025514	hnrnpdl	97	76.792	Paramormyrops_kingsleyae
ENSSHAG00000013616	-	90	88.270	ENSPSIG00000016746	HNRNPDL	93	92.628	Pelodiscus_sinensis
ENSSHAG00000013616	-	100	84.533	ENSPEMG00000016545	-	98	92.881	Peromyscus_maniculatus_bairdii
ENSSHAG00000013616	-	65	71.901	ENSPCIG00000009814	-	79	74.312	Phascolarctos_cinereus
ENSSHAG00000013616	-	100	98.933	ENSPCIG00000003089	-	90	98.933	Phascolarctos_cinereus
ENSSHAG00000013616	-	100	94.180	ENSPPYG00000014886	HNRNPDL	90	94.709	Pongo_abelii
ENSSHAG00000013616	-	100	84.392	ENSPCAG00000011543	HNRNPDL	90	84.392	Procavia_capensis
ENSSHAG00000013616	-	100	94.180	ENSPCOG00000019831	-	90	94.709	Propithecus_coquereli
ENSSHAG00000013616	-	100	85.185	ENSPVAG00000006816	HNRNPDL	90	85.450	Pteropus_vampyrus
ENSSHAG00000013616	-	76	74.444	ENSPNAG00000016380	hnrnpdl	80	77.542	Pygocentrus_nattereri
ENSSHAG00000013616	-	98	92.703	ENSRNOG00000002270	Hnrnpdl	90	92.063	Rattus_norvegicus
ENSSHAG00000013616	-	100	94.180	ENSRBIG00000030310	HNRNPDL	90	94.709	Rhinopithecus_bieti
ENSSHAG00000013616	-	100	94.180	ENSRROG00000034174	HNRNPDL	90	94.709	Rhinopithecus_roxellana
ENSSHAG00000013616	-	80	81.395	ENSSBOG00000022627	-	100	81.395	Saimiri_boliviensis_boliviensis
ENSSHAG00000013616	-	66	76.923	ENSSBOG00000028904	-	99	76.113	Saimiri_boliviensis_boliviensis
ENSSHAG00000013616	-	80	91.030	ENSSBOG00000020566	-	100	91.030	Saimiri_boliviensis_boliviensis
ENSSHAG00000013616	-	82	78.694	ENSSFOG00015005893	hnrnpdl	96	78.694	Scleropages_formosus
ENSSHAG00000013616	-	73	94.239	ENSSARG00000009961	-	98	94.239	Sorex_araneus
ENSSHAG00000013616	-	80	86.469	ENSSPUG00000013700	HNRNPDL	100	87.459	Sphenodon_punctatus
ENSSHAG00000013616	-	100	94.180	ENSSSCG00000037245	-	90	94.709	Sus_scrofa
ENSSHAG00000013616	-	83	52.500	ENSSSCG00000012473	-	63	68.132	Sus_scrofa
ENSSHAG00000013616	-	82	94.118	ENSTGUG00000002850	HNRNPDL	100	94.118	Taeniopygia_guttata
ENSSHAG00000013616	-	94	91.268	ENSTBEG00000002817	-	89	90.423	Tupaia_belangeri
ENSSHAG00000013616	-	100	90.212	ENSTTRG00000001793	-	90	90.741	Tursiops_truncatus
ENSSHAG00000013616	-	100	93.915	ENSUAMG00000011358	HNRNPDL	90	94.444	Ursus_americanus
ENSSHAG00000013616	-	89	94.955	ENSUMAG00000008681	HNRNPDL	79	95.482	Ursus_maritimus
ENSSHAG00000013616	-	73	78.676	ENSVPAG00000002422	-	100	78.676	Vicugna_pacos
ENSSHAG00000013616	-	60	79.121	ENSVVUG00000001421	-	95	79.121	Vulpes_vulpes
ENSSHAG00000013616	-	100	93.651	ENSVVUG00000024653	HNRNPDL	90	94.180	Vulpes_vulpes
ENSSHAG00000013616	-	80	89.216	ENSVVUG00000013596	-	100	88.235	Vulpes_vulpes
ENSSHAG00000013616	-	77	82.534	ENSXETG00000023026	hnrnpdl	97	81.849	Xenopus_tropicalis