EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000013743 (Gene tree)
Gene ID: 100928685
Gene Symbol: FAM172A
Alias: C5orf21|DKFZP564D172|Toupee
Full Name: family with sequence similarity 172 member A
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 450916 bases
Position: chrGL841274.1:1307271-1758186
Accession: 100928685
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000016147	Arb2	PF09757.9	1.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000016281	FAM172A-202	642	-	ENSSHAP00000016148	162 (aa)	-	G3WL43
ENSSHAT00000016280	FAM172A-201	1269	-	ENSSHAP00000016147	416 (aa)	XP_003759889	G3WL42

Gene Model

Click here to download ENSSHAG00000013743's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000013743's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000013743	FAM172A	97	90.594	ENSG00000113391	FAM172A	100	93.671	Homo_sapiens
ENSSHAG00000013743	FAM172A	100	86.058	ENSAPLG00000004055	FAM172A	100	86.058	Anas_platyrhynchos
ENSSHAG00000013743	FAM172A	54	39.381	ENSAPLG00000011555	-	93	39.381	Anas_platyrhynchos
ENSSHAG00000013743	FAM172A	91	87.302	ENSACAG00000013305	FAM172A	98	87.302	Anolis_carolinensis
ENSSHAG00000013743	FAM172A	86	84.637	ENSANAG00000035869	FAM172A	93	82.979	Aotus_nancymaae
ENSSHAG00000013743	FAM172A	97	90.347	ENSBTAG00000050195	FAM172A	100	89.663	Bos_taurus
ENSSHAG00000013743	FAM172A	97	90.594	ENSCJAG00000010444	FAM172A	100	89.904	Callithrix_jacchus
ENSSHAG00000013743	FAM172A	86	91.061	ENSCAFG00000008064	FAM172A	99	90.270	Canis_familiaris
ENSSHAG00000013743	FAM172A	97	89.356	ENSCAFG00020006210	FAM172A	100	88.702	Canis_lupus_dingo
ENSSHAG00000013743	FAM172A	97	90.099	ENSCHIG00000008440	FAM172A	100	89.423	Capra_hircus
ENSSHAG00000013743	FAM172A	64	90.226	ENSTSYG00000006286	FAM172A	85	90.226	Carlito_syrichta
ENSSHAG00000013743	FAM172A	54	82.301	ENSCAPG00000014103	-	100	82.301	Cavia_aperea
ENSSHAG00000013743	FAM172A	97	90.099	ENSCCAG00000023116	FAM172A	100	89.730	Cebus_capucinus
ENSSHAG00000013743	FAM172A	100	80.048	ENSCLAG00000005472	FAM172A	100	91.139	Chinchilla_lanigera
ENSSHAG00000013743	FAM172A	86	42.308	ENSCPBG00000004402	-	94	42.308	Chrysemys_picta_bellii
ENSSHAG00000013743	FAM172A	65	89.259	ENSCANG00000040412	FAM172A	92	89.259	Colobus_angolensis_palliatus
ENSSHAG00000013743	FAM172A	97	90.594	ENSDNOG00000004689	FAM172A	100	89.904	Dasypus_novemcinctus
ENSSHAG00000013743	FAM172A	65	89.630	ENSDORG00000013558	Fam172a	88	89.630	Dipodomys_ordii
ENSSHAG00000013743	FAM172A	79	41.515	ENSEBUG00000016097	-	62	41.515	Eptatretus_burgeri
ENSSHAG00000013743	FAM172A	97	88.366	ENSECAG00000018274	FAM172A	100	87.740	Equus_caballus
ENSSHAG00000013743	FAM172A	96	78.500	ENSEEUG00000002887	FAM172A	100	77.885	Erinaceus_europaeus
ENSSHAG00000013743	FAM172A	97	67.726	ENSELUG00000017647	fam172a	96	67.726	Esox_lucius
ENSSHAG00000013743	FAM172A	97	90.594	ENSFCAG00000025443	FAM172A	100	89.904	Felis_catus
ENSSHAG00000013743	FAM172A	85	89.577	ENSFALG00000009072	FAM172A	95	89.577	Ficedula_albicollis
ENSSHAG00000013743	FAM172A	85	41.854	ENSFALG00000006501	-	99	41.854	Ficedula_albicollis
ENSSHAG00000013743	FAM172A	98	88.177	ENSGALG00000014661	FAM172A	98	88.177	Gallus_gallus
ENSSHAG00000013743	FAM172A	100	91.587	ENSGAGG00000003839	FAM172A	100	91.587	Gopherus_agassizii
ENSSHAG00000013743	FAM172A	83	43.228	ENSGAGG00000022828	-	91	43.228	Gopherus_agassizii
ENSSHAG00000013743	FAM172A	97	89.851	ENSGGOG00000010296	FAM172A	100	89.183	Gorilla_gorilla
ENSSHAG00000013743	FAM172A	97	87.129	ENSHGLG00000011178	FAM172A	100	86.538	Heterocephalus_glaber_female
ENSSHAG00000013743	FAM172A	86	89.356	ENSHGLG00100013340	FAM172A	100	92.405	Heterocephalus_glaber_male
ENSSHAG00000013743	FAM172A	97	89.604	ENSSTOG00000009918	FAM172A	100	88.942	Ictidomys_tridecemlineatus
ENSSHAG00000013743	FAM172A	83	47.550	ENSLACG00000001532	si:ch73-41e3.7	92	47.550	Latimeria_chalumnae
ENSSHAG00000013743	FAM172A	100	74.224	ENSLOCG00000001629	fam172a	100	74.224	Lepisosteus_oculatus
ENSSHAG00000013743	FAM172A	65	89.259	ENSMFAG00000001171	FAM172A	92	89.259	Macaca_fascicularis
ENSSHAG00000013743	FAM172A	92	90.289	ENSMNEG00000039938	FAM172A	92	89.259	Macaca_nemestrina
ENSSHAG00000013743	FAM172A	100	89.904	ENSMICG00000030403	FAM172A	100	89.904	Microcebus_murinus
ENSSHAG00000013743	FAM172A	89	88.108	ENSMOCG00000003613	Fam172a	100	88.108	Microtus_ochrogaster
ENSSHAG00000013743	FAM172A	100	98.317	ENSMODG00000020131	FAM172A	100	98.317	Monodelphis_domestica
ENSSHAG00000013743	FAM172A	75	88.608	MGP_PahariEiJ_G0015818	Fam172a	100	88.608	Mus_pahari
ENSSHAG00000013743	FAM172A	89	90.000	ENSNGAG00000019570	Fam172a	100	90.000	Nannospalax_galili
ENSSHAG00000013743	FAM172A	65	89.259	ENSNLEG00000013903	FAM172A	89	89.259	Nomascus_leucogenys
ENSSHAG00000013743	FAM172A	89	90.270	ENSOANG00000011068	FAM172A	99	90.270	Ornithorhynchus_anatinus
ENSSHAG00000013743	FAM172A	94	90.076	ENSOCUG00000007299	FAM172A	96	89.383	Oryctolagus_cuniculus
ENSSHAG00000013743	FAM172A	97	89.604	ENSOGAG00000015189	FAM172A	100	88.942	Otolemur_garnettii
ENSSHAG00000013743	FAM172A	89	87.601	ENSOARG00000016711	FAM172A	87	86.945	Ovis_aries
ENSSHAG00000013743	FAM172A	65	88.889	ENSPPAG00000030542	FAM172A	92	88.889	Pan_paniscus
ENSSHAG00000013743	FAM172A	97	90.594	ENSPPRG00000006653	FAM172A	100	89.904	Panthera_pardus
ENSSHAG00000013743	FAM172A	97	90.594	ENSPTIG00000012681	FAM172A	100	89.904	Panthera_tigris_altaica
ENSSHAG00000013743	FAM172A	65	88.889	ENSPTRG00000017074	FAM172A	92	88.889	Pan_troglodytes
ENSSHAG00000013743	FAM172A	65	89.259	ENSPANG00000011687	FAM172A	92	89.259	Papio_anubis
ENSSHAG00000013743	FAM172A	97	71.182	ENSPKIG00000012314	fam172a	100	74.757	Paramormyrops_kingsleyae
ENSSHAG00000013743	FAM172A	100	88.221	ENSPEMG00000009604	-	100	91.139	Peromyscus_maniculatus_bairdii
ENSSHAG00000013743	FAM172A	100	97.596	ENSPCIG00000028612	FAM172A	100	97.596	Phascolarctos_cinereus
ENSSHAG00000013743	FAM172A	55	89.520	ENSPCOG00000024072	FAM172A	93	89.520	Propithecus_coquereli
ENSSHAG00000013743	FAM172A	65	86.989	ENSRNOG00000013844	Fam172a	99	86.989	Rattus_norvegicus
ENSSHAG00000013743	FAM172A	65	89.259	ENSRROG00000023807	FAM172A	92	89.259	Rhinopithecus_roxellana
ENSSHAG00000013743	FAM172A	97	90.594	ENSSBOG00000019860	FAM172A	100	89.904	Saimiri_boliviensis_boliviensis
ENSSHAG00000013743	FAM172A	100	86.779	ENSSPUG00000008161	FAM172A	100	86.779	Sphenodon_punctatus
ENSSHAG00000013743	FAM172A	100	89.663	ENSSSCG00000027608	FAM172A	100	90.541	Sus_scrofa
ENSSHAG00000013743	FAM172A	80	45.536	ENSTGUG00000013623	-	100	45.536	Taeniopygia_guttata
ENSSHAG00000013743	FAM172A	91	86.579	ENSTGUG00000000715	FAM172A	100	86.579	Taeniopygia_guttata
ENSSHAG00000013743	FAM172A	79	56.287	ENSTNIG00000009902	fam172a	100	58.333	Tetraodon_nigroviridis
ENSSHAG00000013743	FAM172A	100	86.298	ENSTTRG00000001521	FAM172A	100	86.298	Tursiops_truncatus
ENSSHAG00000013743	FAM172A	97	90.842	ENSUMAG00000005442	FAM172A	100	90.144	Ursus_maritimus
ENSSHAG00000013743	FAM172A	97	89.356	ENSVVUG00000022112	FAM172A	100	88.702	Vulpes_vulpes
ENSSHAG00000013743	FAM172A	100	79.665	ENSXETG00000011592	fam172a	99	79.665	Xenopus_tropicalis
ENSSHAG00000013743	FAM172A	91	41.944	ENSXETG00000033027	-	99	41.944	Xenopus_tropicalis