EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000014086 (Gene tree)
Gene ID: 100928523
Gene Symbol: RCL1
Alias: RNAC|RPCL1
Full Name: RNA terminal phosphate cyclase like 1
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 37493 bases
Position: chrGL841562.1:1391879-1429371
Accession: 17687
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000016561	RTC	PF01137.21	9.2e-45	1	1
ENSSHAP00000016561	RTC_insert	PF05189.13	3.5e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000016700	RCL1-201	993	-	ENSSHAP00000016561	330 (aa)	-	G3WMA6

Gene Model

Click here to download ENSSHAG00000014086's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000014086's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000014086	RCL1	100	92.727	ENSG00000120158	RCL1	96	93.333	Homo_sapiens
ENSSHAG00000014086	RCL1	100	79.456	ENSAPOG00000015666	rcl1	89	79.456	Acanthochromis_polyacanthus
ENSSHAG00000014086	RCL1	100	92.424	ENSAMEG00000002631	RCL1	88	92.424	Ailuropoda_melanoleuca
ENSSHAG00000014086	RCL1	100	78.248	ENSACIG00000021195	rcl1	89	78.248	Amphilophus_citrinellus
ENSSHAG00000014086	RCL1	100	78.248	ENSAOCG00000002223	rcl1	89	78.248	Amphiprion_ocellaris
ENSSHAG00000014086	RCL1	100	78.550	ENSAPEG00000006905	rcl1	89	78.550	Amphiprion_percula
ENSSHAG00000014086	RCL1	100	75.831	ENSATEG00000020026	rcl1	89	75.831	Anabas_testudineus
ENSSHAG00000014086	RCL1	99	85.366	ENSAPLG00000006031	RCL1	100	85.366	Anas_platyrhynchos
ENSSHAG00000014086	RCL1	100	86.364	ENSACAG00000003640	RCL1	88	86.364	Anolis_carolinensis
ENSSHAG00000014086	RCL1	100	92.121	ENSANAG00000037372	RCL1	88	92.121	Aotus_nancymaae
ENSSHAG00000014086	RCL1	100	78.550	ENSACLG00000021724	rcl1	89	78.550	Astatotilapia_calliptera
ENSSHAG00000014086	RCL1	100	77.644	ENSAMXG00000033394	rcl1	89	77.644	Astyanax_mexicanus
ENSSHAG00000014086	RCL1	99	44.214	WBGene00022852	ZK1127.5	89	44.214	Caenorhabditis_elegans
ENSSHAG00000014086	RCL1	100	92.424	ENSCJAG00000011202	RCL1	88	92.424	Callithrix_jacchus
ENSSHAG00000014086	RCL1	100	93.333	ENSCAFG00000002091	RCL1	88	93.333	Canis_familiaris
ENSSHAG00000014086	RCL1	100	93.333	ENSCAFG00020000638	RCL1	69	93.333	Canis_lupus_dingo
ENSSHAG00000014086	RCL1	100	91.818	ENSCHIG00000012407	RCL1	88	91.818	Capra_hircus
ENSSHAG00000014086	RCL1	99	93.578	ENSTSYG00000009592	RCL1	95	94.944	Carlito_syrichta
ENSSHAG00000014086	RCL1	75	79.630	ENSCAPG00000013575	RCL1	100	79.630	Cavia_aperea
ENSSHAG00000014086	RCL1	100	93.030	ENSCPOG00000015354	RCL1	88	93.030	Cavia_porcellus
ENSSHAG00000014086	RCL1	100	92.424	ENSCCAG00000033505	RCL1	97	92.308	Cebus_capucinus
ENSSHAG00000014086	RCL1	100	93.030	ENSCATG00000034721	RCL1	96	93.333	Cercocebus_atys
ENSSHAG00000014086	RCL1	100	92.121	ENSCLAG00000007445	RCL1	88	92.121	Chinchilla_lanigera
ENSSHAG00000014086	RCL1	100	92.727	ENSCSAG00000008811	RCL1	88	92.727	Chlorocebus_sabaeus
ENSSHAG00000014086	RCL1	84	84.058	ENSCHOG00000007216	RCL1	86	84.058	Choloepus_hoffmanni
ENSSHAG00000014086	RCL1	100	89.091	ENSCPBG00000025481	RCL1	94	89.329	Chrysemys_picta_bellii
ENSSHAG00000014086	RCL1	100	56.587	ENSCING00000019565	-	89	56.587	Ciona_intestinalis
ENSSHAG00000014086	RCL1	100	92.727	ENSCANG00000027099	RCL1	88	92.727	Colobus_angolensis_palliatus
ENSSHAG00000014086	RCL1	100	92.727	ENSCGRG00001013748	Rcl1	88	92.727	Cricetulus_griseus_chok1gshd
ENSSHAG00000014086	RCL1	99	92.988	ENSCGRG00000005843	Rcl1	99	92.988	Cricetulus_griseus_crigri
ENSSHAG00000014086	RCL1	100	78.248	ENSCSEG00000000712	rcl1	87	78.248	Cynoglossus_semilaevis
ENSSHAG00000014086	RCL1	100	80.665	ENSCVAG00000011536	rcl1	89	80.665	Cyprinodon_variegatus
ENSSHAG00000014086	RCL1	100	76.737	ENSDARG00000038312	rcl1	90	76.737	Danio_rerio
ENSSHAG00000014086	RCL1	80	92.830	ENSDNOG00000019911	RCL1	100	92.830	Dasypus_novemcinctus
ENSSHAG00000014086	RCL1	100	92.727	ENSDORG00000015645	Rcl1	88	92.727	Dipodomys_ordii
ENSSHAG00000014086	RCL1	99	51.488	FBgn0020909	Rtc1	88	51.488	Drosophila_melanogaster
ENSSHAG00000014086	RCL1	99	60.856	ENSETEG00000014087	-	100	60.856	Echinops_telfairi
ENSSHAG00000014086	RCL1	100	51.506	ENSEBUG00000016621	-	88	51.506	Eptatretus_burgeri
ENSSHAG00000014086	RCL1	100	93.030	ENSEASG00005010653	RCL1	88	93.030	Equus_asinus_asinus
ENSSHAG00000014086	RCL1	100	93.030	ENSECAG00000015973	RCL1	88	93.030	Equus_caballus
ENSSHAG00000014086	RCL1	92	83.828	ENSEEUG00000009801	RCL1	80	83.828	Erinaceus_europaeus
ENSSHAG00000014086	RCL1	100	74.924	ENSELUG00000007353	rcl1	89	74.924	Esox_lucius
ENSSHAG00000014086	RCL1	100	91.818	ENSFCAG00000014557	RCL1	88	91.818	Felis_catus
ENSSHAG00000014086	RCL1	100	84.242	ENSFALG00000010553	RCL1	88	84.242	Ficedula_albicollis
ENSSHAG00000014086	RCL1	99	90.826	ENSFDAG00000004209	RCL1	100	90.826	Fukomys_damarensis
ENSSHAG00000014086	RCL1	100	80.060	ENSFHEG00000011228	rcl1	91	79.758	Fundulus_heteroclitus
ENSSHAG00000014086	RCL1	100	77.039	ENSGMOG00000004677	rcl1	89	77.341	Gadus_morhua
ENSSHAG00000014086	RCL1	100	85.152	ENSGALG00000015024	RCL1	88	85.152	Gallus_gallus
ENSSHAG00000014086	RCL1	100	77.946	ENSGAFG00000007257	rcl1	89	77.946	Gambusia_affinis
ENSSHAG00000014086	RCL1	99	79.027	ENSGACG00000017474	rcl1	88	79.027	Gasterosteus_aculeatus
ENSSHAG00000014086	RCL1	100	88.788	ENSGAGG00000003689	RCL1	88	88.788	Gopherus_agassizii
ENSSHAG00000014086	RCL1	100	92.727	ENSGGOG00000015041	RCL1	96	93.889	Gorilla_gorilla
ENSSHAG00000014086	RCL1	100	78.248	ENSHBUG00000001393	rcl1	89	78.248	Haplochromis_burtoni
ENSSHAG00000014086	RCL1	100	75.758	ENSHGLG00000005368	-	87	75.152	Heterocephalus_glaber_female
ENSSHAG00000014086	RCL1	100	91.818	ENSHGLG00000016452	RCL1	88	91.818	Heterocephalus_glaber_female
ENSSHAG00000014086	RCL1	99	92.049	ENSHGLG00100008718	-	94	92.049	Heterocephalus_glaber_male
ENSSHAG00000014086	RCL1	100	76.970	ENSHGLG00100018010	-	88	76.364	Heterocephalus_glaber_male
ENSSHAG00000014086	RCL1	100	77.644	ENSHCOG00000020170	rcl1	89	77.644	Hippocampus_comes
ENSSHAG00000014086	RCL1	100	77.341	ENSIPUG00000018054	RCL1	89	77.341	Ictalurus_punctatus
ENSSHAG00000014086	RCL1	100	91.515	ENSSTOG00000000023	RCL1	88	91.515	Ictidomys_tridecemlineatus
ENSSHAG00000014086	RCL1	96	83.912	ENSJJAG00000015632	-	85	83.912	Jaculus_jaculus
ENSSHAG00000014086	RCL1	61	69.154	ENSJJAG00000000764	-	95	69.072	Jaculus_jaculus
ENSSHAG00000014086	RCL1	100	91.818	ENSJJAG00000022803	-	88	91.818	Jaculus_jaculus
ENSSHAG00000014086	RCL1	100	77.946	ENSKMAG00000011946	rcl1	89	77.946	Kryptolebias_marmoratus
ENSSHAG00000014086	RCL1	99	78.723	ENSLBEG00000003957	rcl1	93	78.723	Labrus_bergylta
ENSSHAG00000014086	RCL1	92	79.868	ENSLACG00000004594	RCL1	87	84.342	Latimeria_chalumnae
ENSSHAG00000014086	RCL1	100	82.121	ENSLOCG00000010148	rcl1	88	82.121	Lepisosteus_oculatus
ENSSHAG00000014086	RCL1	100	89.697	ENSLAFG00000017495	RCL1	88	89.697	Loxodonta_africana
ENSSHAG00000014086	RCL1	100	92.727	ENSMFAG00000037906	RCL1	88	92.727	Macaca_fascicularis
ENSSHAG00000014086	RCL1	100	92.727	ENSMNEG00000012288	RCL1	96	93.333	Macaca_nemestrina
ENSSHAG00000014086	RCL1	100	92.727	ENSMLEG00000043088	RCL1	88	92.727	Mandrillus_leucophaeus
ENSSHAG00000014086	RCL1	100	77.946	ENSMAMG00000008311	rcl1	89	77.946	Mastacembelus_armatus
ENSSHAG00000014086	RCL1	100	78.550	ENSMZEG00005017292	rcl1	89	78.550	Maylandia_zebra
ENSSHAG00000014086	RCL1	65	83.105	ENSMGAG00000002245	RCL1	97	83.019	Meleagris_gallopavo
ENSSHAG00000014086	RCL1	65	93.023	ENSMAUG00000008922	Rcl1	97	92.788	Mesocricetus_auratus
ENSSHAG00000014086	RCL1	100	92.727	ENSMICG00000015562	RCL1	88	92.727	Microcebus_murinus
ENSSHAG00000014086	RCL1	100	92.121	ENSMOCG00000012145	Rcl1	88	92.121	Microtus_ochrogaster
ENSSHAG00000014086	RCL1	100	75.301	ENSMMOG00000021264	rcl1	89	75.301	Mola_mola
ENSSHAG00000014086	RCL1	95	96.795	ENSMODG00000015377	RCL1	83	96.795	Monodelphis_domestica
ENSSHAG00000014086	RCL1	100	76.737	ENSMALG00000018618	rcl1	89	76.737	Monopterus_albus
ENSSHAG00000014086	RCL1	100	92.424	MGP_CAROLIEiJ_G0022853	Rcl1	88	92.424	Mus_caroli
ENSSHAG00000014086	RCL1	100	91.818	ENSMUSG00000024785	Rcl1	88	91.818	Mus_musculus
ENSSHAG00000014086	RCL1	100	91.818	MGP_PahariEiJ_G0014346	Rcl1	100	94.118	Mus_pahari
ENSSHAG00000014086	RCL1	100	92.424	MGP_SPRETEiJ_G0023771	Rcl1	100	93.529	Mus_spretus
ENSSHAG00000014086	RCL1	100	91.515	ENSMPUG00000004998	RCL1	88	91.515	Mustela_putorius_furo
ENSSHAG00000014086	RCL1	100	91.818	ENSMLUG00000009654	RCL1	88	91.818	Myotis_lucifugus
ENSSHAG00000014086	RCL1	100	91.212	ENSNGAG00000015327	Rcl1	88	91.212	Nannospalax_galili
ENSSHAG00000014086	RCL1	99	78.116	ENSNBRG00000019854	rcl1	90	78.116	Neolamprologus_brichardi
ENSSHAG00000014086	RCL1	100	89.394	ENSNLEG00000008891	RCL1	88	89.394	Nomascus_leucogenys
ENSSHAG00000014086	RCL1	92	97.360	ENSMEUG00000007653	RCL1	81	97.360	Notamacropus_eugenii
ENSSHAG00000014086	RCL1	100	90.303	ENSOPRG00000010965	RCL1	88	90.303	Ochotona_princeps
ENSSHAG00000014086	RCL1	99	75.976	ENSODEG00000004151	RCL1	96	76.900	Octodon_degus
ENSSHAG00000014086	RCL1	100	78.248	ENSONIG00000003871	rcl1	89	78.248	Oreochromis_niloticus
ENSSHAG00000014086	RCL1	76	89.723	ENSOANG00000013193	-	100	89.723	Ornithorhynchus_anatinus
ENSSHAG00000014086	RCL1	100	92.121	ENSOCUG00000008161	RCL1	88	92.121	Oryctolagus_cuniculus
ENSSHAG00000014086	RCL1	100	77.039	ENSORLG00000010443	rcl1	89	77.039	Oryzias_latipes
ENSSHAG00000014086	RCL1	100	77.039	ENSORLG00020012211	rcl1	89	77.039	Oryzias_latipes_hni
ENSSHAG00000014086	RCL1	100	76.737	ENSORLG00015001122	rcl1	89	76.737	Oryzias_latipes_hsok
ENSSHAG00000014086	RCL1	100	78.550	ENSOMEG00000022976	rcl1	78	78.550	Oryzias_melastigma
ENSSHAG00000014086	RCL1	100	92.424	ENSOGAG00000007480	RCL1	88	92.424	Otolemur_garnettii
ENSSHAG00000014086	RCL1	100	91.515	ENSOARG00000013463	RCL1	88	91.515	Ovis_aries
ENSSHAG00000014086	RCL1	100	92.727	ENSPPAG00000037958	RCL1	88	92.727	Pan_paniscus
ENSSHAG00000014086	RCL1	99	91.718	ENSPPRG00000022645	RCL1	97	91.160	Panthera_pardus
ENSSHAG00000014086	RCL1	99	92.025	ENSPTIG00000019031	RCL1	97	91.346	Panthera_tigris_altaica
ENSSHAG00000014086	RCL1	100	92.424	ENSPTRG00000020743	RCL1	96	93.333	Pan_troglodytes
ENSSHAG00000014086	RCL1	100	92.727	ENSPANG00000025151	RCL1	88	92.727	Papio_anubis
ENSSHAG00000014086	RCL1	100	78.550	ENSPKIG00000021022	rcl1	89	78.550	Paramormyrops_kingsleyae
ENSSHAG00000014086	RCL1	99	89.329	ENSPSIG00000012302	RCL1	100	89.329	Pelodiscus_sinensis
ENSSHAG00000014086	RCL1	100	75.529	ENSPMGG00000024007	rcl1	89	75.529	Periophthalmus_magnuspinnatus
ENSSHAG00000014086	RCL1	100	92.727	ENSPEMG00000023275	Rcl1	88	92.727	Peromyscus_maniculatus_bairdii
ENSSHAG00000014086	RCL1	54	67.598	ENSPMAG00000005419	-	95	67.598	Petromyzon_marinus
ENSSHAG00000014086	RCL1	100	96.970	ENSPCIG00000000188	RCL1	93	97.248	Phascolarctos_cinereus
ENSSHAG00000014086	RCL1	100	78.852	ENSPFOG00000019682	rcl1	88	78.852	Poecilia_formosa
ENSSHAG00000014086	RCL1	100	78.852	ENSPLAG00000022354	rcl1	89	78.852	Poecilia_latipinna
ENSSHAG00000014086	RCL1	100	78.852	ENSPMEG00000008131	rcl1	89	78.852	Poecilia_mexicana
ENSSHAG00000014086	RCL1	100	78.550	ENSPREG00000008032	rcl1	89	78.550	Poecilia_reticulata
ENSSHAG00000014086	RCL1	100	92.424	ENSPPYG00000019244	RCL1	88	92.424	Pongo_abelii
ENSSHAG00000014086	RCL1	99	82.822	ENSPCAG00000001440	RCL1	88	82.822	Procavia_capensis
ENSSHAG00000014086	RCL1	100	93.333	ENSPCOG00000009611	RCL1	96	94.444	Propithecus_coquereli
ENSSHAG00000014086	RCL1	100	92.424	ENSPVAG00000015752	RCL1	88	92.424	Pteropus_vampyrus
ENSSHAG00000014086	RCL1	100	78.550	ENSPNYG00000012910	rcl1	89	78.550	Pundamilia_nyererei
ENSSHAG00000014086	RCL1	100	78.248	ENSPNAG00000028307	rcl1	82	78.248	Pygocentrus_nattereri
ENSSHAG00000014086	RCL1	100	91.515	ENSRNOG00000015491	Rcl1	88	91.515	Rattus_norvegicus
ENSSHAG00000014086	RCL1	100	92.424	ENSRBIG00000035818	RCL1	88	92.424	Rhinopithecus_bieti
ENSSHAG00000014086	RCL1	100	92.727	ENSRROG00000029781	RCL1	96	93.333	Rhinopithecus_roxellana
ENSSHAG00000014086	RCL1	99	33.934	YOL010W	-	88	33.934	Saccharomyces_cerevisiae
ENSSHAG00000014086	RCL1	100	92.727	ENSSBOG00000026369	RCL1	97	92.857	Saimiri_boliviensis_boliviensis
ENSSHAG00000014086	RCL1	100	78.550	ENSSFOG00015023020	rcl1	89	78.550	Scleropages_formosus
ENSSHAG00000014086	RCL1	100	77.946	ENSSMAG00000019751	rcl1	76	77.946	Scophthalmus_maximus
ENSSHAG00000014086	RCL1	100	78.248	ENSSDUG00000006349	rcl1	89	78.248	Seriola_dumerili
ENSSHAG00000014086	RCL1	100	77.946	ENSSLDG00000022076	rcl1	89	77.946	Seriola_lalandi_dorsalis
ENSSHAG00000014086	RCL1	99	93.293	ENSSARG00000009260	RCL1	88	93.293	Sorex_araneus
ENSSHAG00000014086	RCL1	100	86.364	ENSSPUG00000016330	RCL1	88	86.364	Sphenodon_punctatus
ENSSHAG00000014086	RCL1	100	79.154	ENSSPAG00000018038	rcl1	89	79.154	Stegastes_partitus
ENSSHAG00000014086	RCL1	100	92.727	ENSSSCG00000005217	RCL1	73	92.727	Sus_scrofa
ENSSHAG00000014086	RCL1	100	83.434	ENSTGUG00000005138	RCL1	89	83.434	Taeniopygia_guttata
ENSSHAG00000014086	RCL1	100	78.248	ENSTRUG00000010493	rcl1	89	78.248	Takifugu_rubripes
ENSSHAG00000014086	RCL1	100	77.341	ENSTNIG00000013214	rcl1	88	77.341	Tetraodon_nigroviridis
ENSSHAG00000014086	RCL1	100	84.545	ENSTBEG00000016339	RCL1	88	84.545	Tupaia_belangeri
ENSSHAG00000014086	RCL1	100	91.818	ENSTTRG00000016525	RCL1	88	91.818	Tursiops_truncatus
ENSSHAG00000014086	RCL1	100	92.424	ENSUAMG00000005598	RCL1	88	92.424	Ursus_americanus
ENSSHAG00000014086	RCL1	99	91.793	ENSUMAG00000017890	RCL1	98	91.793	Ursus_maritimus
ENSSHAG00000014086	RCL1	99	93.578	ENSVPAG00000009188	RCL1	100	93.578	Vicugna_pacos
ENSSHAG00000014086	RCL1	99	93.598	ENSVVUG00000007304	RCL1	89	93.598	Vulpes_vulpes
ENSSHAG00000014086	RCL1	100	75.529	ENSXETG00000000592	rcl1	88	75.529	Xenopus_tropicalis
ENSSHAG00000014086	RCL1	100	78.852	ENSXCOG00000004922	rcl1	89	78.852	Xiphophorus_couchianus
ENSSHAG00000014086	RCL1	100	78.852	ENSXMAG00000022366	RCL1	89	78.852	Xiphophorus_maculatus