EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000014358 (Gene tree)
Gene ID: 100915969
Gene Symbol: HELLS
Alias: LSH|Nbla10143|PASG|SMARCA6
Full Name: helicase%2C lymphoid specific
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 28747 bases
Position: chrGL834453.1:1461134-1489880
Accession: 100915969
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000016882	ResIII	PF04851.15	8.1e-07	1	1
ENSSHAP00000016881	ResIII	PF04851.15	8.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000017023	HELLS-201	3463	-	ENSSHAP00000016881	842 (aa)	-	G3WN76
ENSSHAT00000017024	HELLS-202	3667	-	ENSSHAP00000016882	824 (aa)	XP_012395828	G3WN77

Gene Model

Click here to download ENSSHAG00000014358's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000014358's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000014358	HELLS	64	46.875	ENSSHAG00000017395	CHD1L	51	51.942
ENSSHAG00000014358	HELLS	65	47.410	ENSSHAG00000013518	SMARCA1	52	47.410
ENSSHAG00000014358	HELLS	65	47.200	ENSSHAG00000008464	SMARCA5	51	47.200

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000014358	HELLS	99	86.520	ENSG00000119969	HELLS	99	86.713	Homo_sapiens
ENSSHAG00000014358	HELLS	95	67.430	ENSAPOG00000007707	hells	99	64.801	Acanthochromis_polyacanthus
ENSSHAG00000014358	HELLS	100	85.351	ENSAMEG00000013525	HELLS	98	85.593	Ailuropoda_melanoleuca
ENSSHAG00000014358	HELLS	86	67.511	ENSACIG00000018996	hells	99	67.511	Amphilophus_citrinellus
ENSSHAG00000014358	HELLS	96	67.465	ENSAOCG00000006348	hells	95	66.953	Amphiprion_ocellaris
ENSSHAG00000014358	HELLS	96	67.591	ENSAPEG00000001422	hells	95	67.076	Amphiprion_percula
ENSSHAG00000014358	HELLS	98	66.379	ENSATEG00000008107	hells	99	64.895	Anabas_testudineus
ENSSHAG00000014358	HELLS	95	83.503	ENSAPLG00000002649	HELLS	99	82.995	Anas_platyrhynchos
ENSSHAG00000014358	HELLS	87	75.694	ENSACAG00000028785	HELLS	96	75.694	Anolis_carolinensis
ENSSHAG00000014358	HELLS	99	85.662	ENSANAG00000034765	-	100	85.328	Aotus_nancymaae
ENSSHAG00000014358	HELLS	96	64.602	ENSACLG00000007613	hells	99	64.198	Astatotilapia_calliptera
ENSSHAG00000014358	HELLS	84	67.630	ENSAMXG00000002088	hells	99	67.571	Astyanax_mexicanus
ENSSHAG00000014358	HELLS	82	86.330	ENSBTAG00000005979	HELLS	100	86.330	Bos_taurus
ENSSHAG00000014358	HELLS	99	86.275	ENSCJAG00000015819	HELLS	100	85.613	Callithrix_jacchus
ENSSHAG00000014358	HELLS	99	85.645	ENSCAFG00000008090	HELLS	98	85.645	Canis_familiaris
ENSSHAG00000014358	HELLS	96	86.058	ENSCAFG00020004809	HELLS	98	86.312	Canis_lupus_dingo
ENSSHAG00000014358	HELLS	100	82.788	ENSCHIG00000019462	HELLS	98	81.939	Capra_hircus
ENSSHAG00000014358	HELLS	100	84.848	ENSTSYG00000005811	-	99	85.449	Carlito_syrichta
ENSSHAG00000014358	HELLS	100	83.636	ENSCPOG00000003043	HELLS	98	83.636	Cavia_porcellus
ENSSHAG00000014358	HELLS	57	86.705	ENSCCAG00000026761	HELLS	98	86.705	Cebus_capucinus
ENSSHAG00000014358	HELLS	99	81.555	ENSCATG00000033830	HELLS	99	86.294	Cercocebus_atys
ENSSHAG00000014358	HELLS	100	84.121	ENSCLAG00000003938	HELLS	100	84.121	Chinchilla_lanigera
ENSSHAG00000014358	HELLS	87	86.154	ENSCSAG00000006181	HELLS	99	86.154	Chlorocebus_sabaeus
ENSSHAG00000014358	HELLS	87	84.519	ENSCPBG00000025739	HELLS	99	86.431	Chrysemys_picta_bellii
ENSSHAG00000014358	HELLS	99	81.671	ENSCANG00000037736	HELLS	99	86.434	Colobus_angolensis_palliatus
ENSSHAG00000014358	HELLS	99	84.860	ENSCGRG00001017410	Hells	99	83.516	Cricetulus_griseus_chok1gshd
ENSSHAG00000014358	HELLS	94	66.538	ENSCSEG00000016985	hells	99	66.538	Cynoglossus_semilaevis
ENSSHAG00000014358	HELLS	64	62.879	ENSCVAG00000000159	hells	96	63.654	Cyprinodon_variegatus
ENSSHAG00000014358	HELLS	95	68.488	ENSDARG00000057738	hells	95	67.436	Danio_rerio
ENSSHAG00000014358	HELLS	77	88.504	ENSDNOG00000017758	HELLS	100	88.504	Dasypus_novemcinctus
ENSSHAG00000014358	HELLS	99	85.452	ENSDORG00000011812	Hells	99	83.496	Dipodomys_ordii
ENSSHAG00000014358	HELLS	75	53.017	ENSEBUG00000016152	hells	93	53.017	Eptatretus_burgeri
ENSSHAG00000014358	HELLS	99	86.585	ENSEASG00005011764	HELLS	99	84.860	Equus_asinus_asinus
ENSSHAG00000014358	HELLS	99	86.813	ENSECAG00000018810	HELLS	97	86.813	Equus_caballus
ENSSHAG00000014358	HELLS	81	93.478	ENSEEUG00000007680	HELLS	88	93.478	Erinaceus_europaeus
ENSSHAG00000014358	HELLS	96	65.283	ENSELUG00000014909	hells	93	65.025	Esox_lucius
ENSSHAG00000014358	HELLS	87	86.853	ENSFCAG00000005206	HELLS	99	86.853	Felis_catus
ENSSHAG00000014358	HELLS	99	82.518	ENSFALG00000007136	HELLS	99	81.907	Ficedula_albicollis
ENSSHAG00000014358	HELLS	100	82.788	ENSFDAG00000010042	HELLS	99	83.273	Fukomys_damarensis
ENSSHAG00000014358	HELLS	96	65.409	ENSFHEG00000022950	hells	95	64.900	Fundulus_heteroclitus
ENSSHAG00000014358	HELLS	99	78.458	ENSGALG00000005451	HELLS	100	83.429	Gallus_gallus
ENSSHAG00000014358	HELLS	96	65.409	ENSGAFG00000001204	hells	94	64.988	Gambusia_affinis
ENSSHAG00000014358	HELLS	97	64.045	ENSGACG00000003897	hells	93	63.920	Gasterosteus_aculeatus
ENSSHAG00000014358	HELLS	87	83.939	ENSGAGG00000010269	HELLS	100	85.551	Gopherus_agassizii
ENSSHAG00000014358	HELLS	99	81.863	ENSGGOG00000008103	HELLS	99	86.573	Gorilla_gorilla
ENSSHAG00000014358	HELLS	96	65.952	ENSHBUG00000010270	hells	99	64.198	Haplochromis_burtoni
ENSSHAG00000014358	HELLS	99	84.982	ENSHGLG00000011377	-	99	84.982	Heterocephalus_glaber_female
ENSSHAG00000014358	HELLS	73	84.000	ENSHGLG00000006537	-	99	84.000	Heterocephalus_glaber_female
ENSSHAG00000014358	HELLS	88	75.342	ENSHGLG00100001957	-	94	75.342	Heterocephalus_glaber_male
ENSSHAG00000014358	HELLS	99	84.737	ENSHGLG00100017230	-	99	84.737	Heterocephalus_glaber_male
ENSSHAG00000014358	HELLS	86	66.761	ENSHCOG00000001119	hells	96	66.761	Hippocampus_comes
ENSSHAG00000014358	HELLS	99	66.949	ENSIPUG00000002634	HELLS	96	66.949	Ictalurus_punctatus
ENSSHAG00000014358	HELLS	99	85.732	ENSSTOG00000021976	HELLS	99	85.732	Ictidomys_tridecemlineatus
ENSSHAG00000014358	HELLS	99	80.049	ENSJJAG00000000865	Hells	99	79.070	Jaculus_jaculus
ENSSHAG00000014358	HELLS	96	66.961	ENSKMAG00000017279	hells	94	66.626	Kryptolebias_marmoratus
ENSSHAG00000014358	HELLS	98	66.995	ENSLBEG00000027807	hells	94	66.995	Labrus_bergylta
ENSSHAG00000014358	HELLS	100	85.818	ENSLAFG00000007049	HELLS	99	85.818	Loxodonta_africana
ENSSHAG00000014358	HELLS	99	86.152	ENSMFAG00000044053	HELLS	99	86.207	Macaca_fascicularis
ENSSHAG00000014358	HELLS	99	79.094	ENSMMUG00000017255	HELLS	100	86.331	Macaca_mulatta
ENSSHAG00000014358	HELLS	99	81.555	ENSMNEG00000042628	HELLS	99	86.294	Macaca_nemestrina
ENSSHAG00000014358	HELLS	99	86.152	ENSMLEG00000041751	HELLS	99	86.207	Mandrillus_leucophaeus
ENSSHAG00000014358	HELLS	95	65.605	ENSMAMG00000009850	hells	99	67.149	Mastacembelus_armatus
ENSSHAG00000014358	HELLS	98	64.578	ENSMZEG00005018414	hells	99	64.198	Maylandia_zebra
ENSSHAG00000014358	HELLS	97	81.017	ENSMGAG00000006818	HELLS	97	84.234	Meleagris_gallopavo
ENSSHAG00000014358	HELLS	97	82.836	ENSMAUG00000021941	Hells	98	82.836	Mesocricetus_auratus
ENSSHAG00000014358	HELLS	70	86.285	ENSMICG00000046554	-	95	86.285	Microcebus_murinus
ENSSHAG00000014358	HELLS	99	83.678	ENSMOCG00000019342	Hells	99	83.678	Microtus_ochrogaster
ENSSHAG00000014358	HELLS	98	60.613	ENSMMOG00000007950	hells	97	60.073	Mola_mola
ENSSHAG00000014358	HELLS	97	96.015	ENSMODG00000005589	-	51	96.015	Monodelphis_domestica
ENSSHAG00000014358	HELLS	96	62.832	ENSMALG00000010244	hells	94	62.346	Monopterus_albus
ENSSHAG00000014358	HELLS	99	84.249	MGP_CAROLIEiJ_G0022930	Hells	99	84.249	Mus_caroli
ENSSHAG00000014358	HELLS	99	84.493	ENSMUSG00000025001	Hells	99	84.493	Mus_musculus
ENSSHAG00000014358	HELLS	99	85.104	MGP_PahariEiJ_G0014423	Hells	99	85.104	Mus_pahari
ENSSHAG00000014358	HELLS	99	84.737	MGP_SPRETEiJ_G0023848	Hells	99	84.737	Mus_spretus
ENSSHAG00000014358	HELLS	99	85.714	ENSMPUG00000017131	HELLS	98	85.714	Mustela_putorius_furo
ENSSHAG00000014358	HELLS	99	84.860	ENSMLUG00000030511	HELLS	97	84.860	Myotis_lucifugus
ENSSHAG00000014358	HELLS	99	84.249	ENSNGAG00000014049	Hells	97	84.249	Nannospalax_galili
ENSSHAG00000014358	HELLS	96	60.908	ENSNBRG00000024242	hells	99	60.591	Neolamprologus_brichardi
ENSSHAG00000014358	HELLS	99	81.903	ENSNLEG00000012987	HELLS	99	86.573	Nomascus_leucogenys
ENSSHAG00000014358	HELLS	100	81.376	ENSODEG00000015916	HELLS	98	82.282	Octodon_degus
ENSSHAG00000014358	HELLS	96	65.952	ENSONIG00000013166	hells	94	65.764	Oreochromis_niloticus
ENSSHAG00000014358	HELLS	100	87.515	ENSOANG00000005139	HELLS	99	87.515	Ornithorhynchus_anatinus
ENSSHAG00000014358	HELLS	99	85.226	ENSOCUG00000026731	HELLS	97	85.226	Oryctolagus_cuniculus
ENSSHAG00000014358	HELLS	98	66.749	ENSORLG00000000987	hells	96	65.513	Oryzias_latipes
ENSSHAG00000014358	HELLS	98	66.502	ENSORLG00020003952	hells	96	65.513	Oryzias_latipes_hni
ENSSHAG00000014358	HELLS	98	66.502	ENSORLG00015010960	hells	96	64.771	Oryzias_latipes_hsok
ENSSHAG00000014358	HELLS	98	65.394	ENSOMEG00000000135	hells	93	65.640	Oryzias_melastigma
ENSSHAG00000014358	HELLS	99	84.982	ENSOGAG00000017145	HELLS	98	84.982	Otolemur_garnettii
ENSSHAG00000014358	HELLS	100	84.970	ENSOARG00000004495	HELLS	98	84.970	Ovis_aries
ENSSHAG00000014358	HELLS	99	81.863	ENSPPAG00000001726	HELLS	99	86.573	Pan_paniscus
ENSSHAG00000014358	HELLS	87	86.573	ENSPPRG00000005839	HELLS	99	86.853	Panthera_pardus
ENSSHAG00000014358	HELLS	99	85.437	ENSPTIG00000007647	HELLS	99	86.853	Panthera_tigris_altaica
ENSSHAG00000014358	HELLS	99	81.740	ENSPTRG00000002778	HELLS	99	85.877	Pan_troglodytes
ENSSHAG00000014358	HELLS	99	81.555	ENSPANG00000033528	HELLS	99	86.294	Papio_anubis
ENSSHAG00000014358	HELLS	96	66.247	ENSPKIG00000010890	hells	98	63.882	Paramormyrops_kingsleyae
ENSSHAG00000014358	HELLS	96	83.249	ENSPSIG00000005462	HELLS	100	84.005	Pelodiscus_sinensis
ENSSHAG00000014358	HELLS	98	60.736	ENSPMGG00000014690	hells	98	66.522	Periophthalmus_magnuspinnatus
ENSSHAG00000014358	HELLS	99	77.900	ENSPEMG00000017579	Hells	99	77.900	Peromyscus_maniculatus_bairdii
ENSSHAG00000014358	HELLS	97	63.184	ENSPMAG00000004376	hells	96	63.184	Petromyzon_marinus
ENSSHAG00000014358	HELLS	100	97.209	ENSPCIG00000013361	HELLS	98	97.209	Phascolarctos_cinereus
ENSSHAG00000014358	HELLS	96	64.151	ENSPFOG00000001954	hells	94	64.373	Poecilia_formosa
ENSSHAG00000014358	HELLS	96	64.277	ENSPLAG00000006504	hells	97	63.994	Poecilia_latipinna
ENSSHAG00000014358	HELLS	96	64.151	ENSPMEG00000003024	hells	97	63.854	Poecilia_mexicana
ENSSHAG00000014358	HELLS	99	62.874	ENSPREG00000020337	hells	94	64.540	Poecilia_reticulata
ENSSHAG00000014358	HELLS	99	81.787	ENSPPYG00000002502	HELLS	97	81.787	Pongo_abelii
ENSSHAG00000014358	HELLS	100	80.606	ENSPCAG00000013618	HELLS	98	80.606	Procavia_capensis
ENSSHAG00000014358	HELLS	100	82.014	ENSPCOG00000023985	HELLS	100	85.563	Propithecus_coquereli
ENSSHAG00000014358	HELLS	91	87.293	ENSPVAG00000017899	HELLS	91	87.293	Pteropus_vampyrus
ENSSHAG00000014358	HELLS	96	63.338	ENSPNYG00000009100	hells	99	62.716	Pundamilia_nyererei
ENSSHAG00000014358	HELLS	93	66.451	ENSPNAG00000029968	hells	96	65.786	Pygocentrus_nattereri
ENSSHAG00000014358	HELLS	99	85.226	ENSRNOG00000047104	Hells	97	85.226	Rattus_norvegicus
ENSSHAG00000014358	HELLS	99	85.226	ENSRNOG00000047692	LOC100911660	99	85.226	Rattus_norvegicus
ENSSHAG00000014358	HELLS	99	80.886	ENSRBIG00000041080	HELLS	100	85.755	Rhinopithecus_bieti
ENSSHAG00000014358	HELLS	99	82.160	ENSRROG00000040169	HELLS	99	86.573	Rhinopithecus_roxellana
ENSSHAG00000014358	HELLS	96	68.216	ENSSFOG00015017895	hells	98	67.482	Scleropages_formosus
ENSSHAG00000014358	HELLS	98	66.256	ENSSMAG00000017423	hells	99	64.198	Scophthalmus_maximus
ENSSHAG00000014358	HELLS	98	67.241	ENSSDUG00000016924	hells	99	64.771	Seriola_dumerili
ENSSHAG00000014358	HELLS	98	64.858	ENSSLDG00000018960	hells	94	64.901	Seriola_lalandi_dorsalis
ENSSHAG00000014358	HELLS	99	80.000	ENSSPUG00000017425	HELLS	99	82.278	Sphenodon_punctatus
ENSSHAG00000014358	HELLS	93	67.620	ENSSPAG00000015579	hells	99	65.988	Stegastes_partitus
ENSSHAG00000014358	HELLS	99	85.958	ENSSSCG00000010486	HELLS	97	85.958	Sus_scrofa
ENSSHAG00000014358	HELLS	99	82.725	ENSTGUG00000007157	HELLS	98	82.238	Taeniopygia_guttata
ENSSHAG00000014358	HELLS	95	66.667	ENSTRUG00000000350	hells	96	64.074	Takifugu_rubripes
ENSSHAG00000014358	HELLS	98	56.865	ENSTNIG00000003738	hells	99	57.108	Tetraodon_nigroviridis
ENSSHAG00000014358	HELLS	100	85.212	ENSUAMG00000003343	HELLS	99	85.212	Ursus_americanus
ENSSHAG00000014358	HELLS	100	85.576	ENSUMAG00000004748	HELLS	99	87.808	Ursus_maritimus
ENSSHAG00000014358	HELLS	99	84.559	ENSVPAG00000010115	HELLS	97	84.804	Vicugna_pacos
ENSSHAG00000014358	HELLS	99	85.836	ENSVVUG00000022808	HELLS	97	86.081	Vulpes_vulpes
ENSSHAG00000014358	HELLS	96	63.258	ENSXCOG00000013840	hells	97	62.885	Xiphophorus_couchianus
ENSSHAG00000014358	HELLS	99	63.234	ENSXMAG00000005731	hells	97	64.598	Xiphophorus_maculatus