EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000014381 (Gene tree)
Gene ID: 100925495
Gene Symbol: TRMT1
Alias: FLJ20244|TRM1
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 6244 bases
Position: chrGL841415.1:1466853-1473096
Accession: 25980
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000016907	TRM	PF02005.16	1.4e-145	1	1
ENSSHAP00000016907	Met_10	PF02475.16	5.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000017049	TRMT1-201	3228	-	ENSSHAP00000016907	607 (aa)	-	G3WNA2

Gene Model

Click here to download ENSSHAG00000014381's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000014381's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000014381	TRMT1	97	77.038	ENSG00000104907	TRMT1	100	84.293	Homo_sapiens
ENSSHAG00000014381	TRMT1	97	75.993	ENSAMEG00000012598	TRMT1	87	77.342	Ailuropoda_melanoleuca
ENSSHAG00000014381	TRMT1	98	59.500	ENSACIG00000018680	trmt1	88	61.336	Amphilophus_citrinellus
ENSSHAG00000014381	TRMT1	94	67.882	ENSAOCG00000006781	trmt1	85	68.310	Amphiprion_ocellaris
ENSSHAG00000014381	TRMT1	94	67.759	ENSAPEG00000007712	trmt1	85	68.182	Amphiprion_percula
ENSSHAG00000014381	TRMT1	96	67.863	ENSATEG00000001872	trmt1	84	69.190	Anabas_testudineus
ENSSHAG00000014381	TRMT1	96	67.851	ENSACAG00000003825	TRMT1	92	69.596	Anolis_carolinensis
ENSSHAG00000014381	TRMT1	96	75.127	ENSANAG00000023016	TRMT1	92	76.132	Aotus_nancymaae
ENSSHAG00000014381	TRMT1	93	65.909	ENSACLG00000010073	trmt1	92	66.197	Astatotilapia_calliptera
ENSSHAG00000014381	TRMT1	96	66.892	ENSAMXG00000012026	trmt1	86	67.993	Astyanax_mexicanus
ENSSHAG00000014381	TRMT1	100	74.920	ENSBTAG00000019325	TRMT1	83	77.342	Bos_taurus
ENSSHAG00000014381	TRMT1	87	40.809	WBGene00006613	trm-1	98	40.809	Caenorhabditis_elegans
ENSSHAG00000014381	TRMT1	99	72.920	ENSCJAG00000004566	TRMT1	88	75.436	Callithrix_jacchus
ENSSHAG00000014381	TRMT1	98	76.936	ENSCAFG00000017070	TRMT1	92	78.535	Canis_familiaris
ENSSHAG00000014381	TRMT1	98	76.277	ENSCAFG00020005397	TRMT1	90	76.752	Canis_lupus_dingo
ENSSHAG00000014381	TRMT1	100	74.799	ENSCHIG00000013569	TRMT1	89	77.041	Capra_hircus
ENSSHAG00000014381	TRMT1	97	72.020	ENSTSYG00000003207	TRMT1	89	72.789	Carlito_syrichta
ENSSHAG00000014381	TRMT1	87	72.643	ENSCAPG00000003355	TRMT1	94	73.134	Cavia_aperea
ENSSHAG00000014381	TRMT1	94	75.639	ENSCPOG00000011754	TRMT1	89	75.639	Cavia_porcellus
ENSSHAG00000014381	TRMT1	97	73.333	ENSCCAG00000022263	TRMT1	92	75.261	Cebus_capucinus
ENSSHAG00000014381	TRMT1	98	76.105	ENSCATG00000039850	TRMT1	89	77.342	Cercocebus_atys
ENSSHAG00000014381	TRMT1	85	63.793	ENSCATG00000038220	-	89	63.793	Cercocebus_atys
ENSSHAG00000014381	TRMT1	96	75.926	ENSCLAG00000015295	TRMT1	91	74.010	Chinchilla_lanigera
ENSSHAG00000014381	TRMT1	81	78.244	ENSCSAG00000006500	TRMT1	93	78.819	Chlorocebus_sabaeus
ENSSHAG00000014381	TRMT1	99	66.250	ENSCPBG00000023866	TRMT1	85	71.986	Chrysemys_picta_bellii
ENSSHAG00000014381	TRMT1	90	46.931	ENSCING00000002884	-	99	46.931	Ciona_intestinalis
ENSSHAG00000014381	TRMT1	89	48.263	ENSCSAVG00000010927	-	100	47.610	Ciona_savignyi
ENSSHAG00000014381	TRMT1	97	61.360	ENSCANG00000040631	TRMT1	89	61.800	Colobus_angolensis_palliatus
ENSSHAG00000014381	TRMT1	97	57.737	ENSCANG00000031650	-	90	58.662	Colobus_angolensis_palliatus
ENSSHAG00000014381	TRMT1	97	76.119	ENSCGRG00001022594	Trmt1	90	76.792	Cricetulus_griseus_chok1gshd
ENSSHAG00000014381	TRMT1	97	76.119	ENSCGRG00000017732	Trmt1	88	76.792	Cricetulus_griseus_crigri
ENSSHAG00000014381	TRMT1	93	68.007	ENSCSEG00000001643	trmt1	84	70.233	Cynoglossus_semilaevis
ENSSHAG00000014381	TRMT1	93	69.474	ENSCVAG00000011886	trmt1	86	69.788	Cyprinodon_variegatus
ENSSHAG00000014381	TRMT1	96	65.833	ENSDARG00000010978	trmt1	85	67.647	Danio_rerio
ENSSHAG00000014381	TRMT1	87	51.845	ENSDNOG00000048240	-	89	52.571	Dasypus_novemcinctus
ENSSHAG00000014381	TRMT1	99	72.977	ENSDORG00000014298	Trmt1	89	74.787	Dipodomys_ordii
ENSSHAG00000014381	TRMT1	94	46.644	FBgn0032430	CG6388	94	47.834	Drosophila_melanogaster
ENSSHAG00000014381	TRMT1	86	53.346	ENSEBUG00000003449	trmt1	75	54.280	Eptatretus_burgeri
ENSSHAG00000014381	TRMT1	99	75.487	ENSEASG00005004050	TRMT1	90	78.683	Equus_asinus_asinus
ENSSHAG00000014381	TRMT1	99	75.649	ENSECAG00000016149	TRMT1	90	78.856	Equus_caballus
ENSSHAG00000014381	TRMT1	65	65.570	ENSEEUG00000014102	-	100	65.570	Erinaceus_europaeus
ENSSHAG00000014381	TRMT1	96	64.262	ENSELUG00000021659	trmt1	85	65.854	Esox_lucius
ENSSHAG00000014381	TRMT1	97	77.114	ENSFCAG00000000483	TRMT1	89	77.853	Felis_catus
ENSSHAG00000014381	TRMT1	98	73.432	ENSFDAG00000007386	TRMT1	86	76.357	Fukomys_damarensis
ENSSHAG00000014381	TRMT1	84	71.262	ENSFHEG00000012865	trmt1	86	71.262	Fundulus_heteroclitus
ENSSHAG00000014381	TRMT1	94	61.189	ENSGMOG00000006564	trmt1	99	61.228	Gadus_morhua
ENSSHAG00000014381	TRMT1	96	67.279	ENSGAFG00000011862	trmt1	89	70.123	Gambusia_affinis
ENSSHAG00000014381	TRMT1	96	65.372	ENSGACG00000000227	trmt1	92	66.784	Gasterosteus_aculeatus
ENSSHAG00000014381	TRMT1	99	69.333	ENSGAGG00000016432	TRMT1	84	72.114	Gopherus_agassizii
ENSSHAG00000014381	TRMT1	98	76.759	ENSGGOG00000014007	TRMT1	89	78.024	Gorilla_gorilla
ENSSHAG00000014381	TRMT1	92	59.425	ENSHBUG00000008821	trmt1	93	59.425	Haplochromis_burtoni
ENSSHAG00000014381	TRMT1	98	74.013	ENSHGLG00000015972	TRMT1	87	77.018	Heterocephalus_glaber_female
ENSSHAG00000014381	TRMT1	98	69.130	ENSHGLG00100018112	TRMT1	87	71.804	Heterocephalus_glaber_male
ENSSHAG00000014381	TRMT1	93	65.324	ENSHCOG00000009447	trmt1	88	65.149	Hippocampus_comes
ENSSHAG00000014381	TRMT1	97	65.517	ENSIPUG00000002899	trmt1	85	67.526	Ictalurus_punctatus
ENSSHAG00000014381	TRMT1	96	77.462	ENSSTOG00000012531	TRMT1	90	77.816	Ictidomys_tridecemlineatus
ENSSHAG00000014381	TRMT1	94	75.722	ENSJJAG00000017154	Trmt1	93	73.684	Jaculus_jaculus
ENSSHAG00000014381	TRMT1	94	68.924	ENSKMAG00000011809	trmt1	95	68.070	Kryptolebias_marmoratus
ENSSHAG00000014381	TRMT1	96	65.058	ENSLBEG00000012703	trmt1	84	67.430	Labrus_bergylta
ENSSHAG00000014381	TRMT1	93	60.070	ENSLACG00000014585	TRMT1	94	60.070	Latimeria_chalumnae
ENSSHAG00000014381	TRMT1	93	63.316	ENSLOCG00000006479	trmt1	97	63.766	Lepisosteus_oculatus
ENSSHAG00000014381	TRMT1	98	75.574	ENSLAFG00000014072	TRMT1	89	77.643	Loxodonta_africana
ENSSHAG00000014381	TRMT1	98	76.268	ENSMFAG00000033143	TRMT1	89	77.513	Macaca_fascicularis
ENSSHAG00000014381	TRMT1	98	71.031	ENSMMUG00000001167	TRMT1	89	72.061	Macaca_mulatta
ENSSHAG00000014381	TRMT1	98	76.105	ENSMNEG00000037867	TRMT1	89	77.342	Macaca_nemestrina
ENSSHAG00000014381	TRMT1	95	77.551	ENSMLEG00000016142	TRMT1	87	78.634	Mandrillus_leucophaeus
ENSSHAG00000014381	TRMT1	97	66.778	ENSMAMG00000004357	trmt1	85	69.056	Mastacembelus_armatus
ENSSHAG00000014381	TRMT1	96	63.967	ENSMZEG00005014510	trmt1	85	66.725	Maylandia_zebra
ENSSHAG00000014381	TRMT1	97	75.500	ENSMAUG00000011134	Trmt1	88	76.158	Mesocricetus_auratus
ENSSHAG00000014381	TRMT1	98	75.902	ENSMICG00000000793	TRMT1	91	76.033	Microcebus_murinus
ENSSHAG00000014381	TRMT1	97	75.707	ENSMOCG00000015895	Trmt1	88	76.451	Microtus_ochrogaster
ENSSHAG00000014381	TRMT1	94	67.601	ENSMMOG00000011097	trmt1	92	68.206	Mola_mola
ENSSHAG00000014381	TRMT1	98	90.985	ENSMODG00000011619	TRMT1	95	91.854	Monodelphis_domestica
ENSSHAG00000014381	TRMT1	98	75.908	MGP_CAROLIEiJ_G0031304	Trmt1	95	72.065	Mus_caroli
ENSSHAG00000014381	TRMT1	98	75.908	ENSMUSG00000001909	Trmt1	95	71.660	Mus_musculus
ENSSHAG00000014381	TRMT1	98	75.743	MGP_SPRETEiJ_G0032422	Trmt1	95	71.255	Mus_spretus
ENSSHAG00000014381	TRMT1	97	76.656	ENSMPUG00000004210	TRMT1	84	78.194	Mustela_putorius_furo
ENSSHAG00000014381	TRMT1	99	76.461	ENSMLUG00000012809	TRMT1	87	78.535	Myotis_lucifugus
ENSSHAG00000014381	TRMT1	97	75.993	ENSNGAG00000022486	Trmt1	89	76.401	Nannospalax_galili
ENSSHAG00000014381	TRMT1	81	70.149	ENSNBRG00000024376	trmt1	85	70.695	Neolamprologus_brichardi
ENSSHAG00000014381	TRMT1	78	74.679	ENSNLEG00000013019	-	86	75.497	Nomascus_leucogenys
ENSSHAG00000014381	TRMT1	95	92.055	ENSMEUG00000013756	TRMT1	98	92.133	Notamacropus_eugenii
ENSSHAG00000014381	TRMT1	80	79.419	ENSOPRG00000009471	-	73	79.512	Ochotona_princeps
ENSSHAG00000014381	TRMT1	96	76.134	ENSODEG00000010323	TRMT1	89	77.358	Octodon_degus
ENSSHAG00000014381	TRMT1	96	67.458	ENSONIG00000000400	trmt1	93	68.576	Oreochromis_niloticus
ENSSHAG00000014381	TRMT1	80	79.158	ENSOCUG00000021934	TRMT1	93	80.041	Oryctolagus_cuniculus
ENSSHAG00000014381	TRMT1	97	60.948	ENSORLG00000020074	trmt1	90	63.432	Oryzias_latipes
ENSSHAG00000014381	TRMT1	97	65.124	ENSORLG00020007561	trmt1	90	66.551	Oryzias_latipes_hni
ENSSHAG00000014381	TRMT1	97	65.124	ENSORLG00015006547	trmt1	87	67.426	Oryzias_latipes_hsok
ENSSHAG00000014381	TRMT1	97	65.455	ENSOMEG00000019343	trmt1	88	67.071	Oryzias_melastigma
ENSSHAG00000014381	TRMT1	94	76.289	ENSOGAG00000025576	TRMT1	90	76.910	Otolemur_garnettii
ENSSHAG00000014381	TRMT1	99	61.003	ENSOARG00000009397	TRMT1	83	63.051	Ovis_aries
ENSSHAG00000014381	TRMT1	97	61.755	ENSPPRG00000012117	TRMT1	90	69.336	Panthera_pardus
ENSSHAG00000014381	TRMT1	74	74.455	ENSPTIG00000008833	TRMT1	86	75.484	Panthera_tigris_altaica
ENSSHAG00000014381	TRMT1	97	77.205	ENSPTRG00000010557	TRMT1	89	78.024	Pan_troglodytes
ENSSHAG00000014381	TRMT1	99	56.078	ENSPTRG00000050421	-	91	58.014	Pan_troglodytes
ENSSHAG00000014381	TRMT1	78	62.577	ENSPANG00000034058	-	80	64.009	Papio_anubis
ENSSHAG00000014381	TRMT1	98	76.268	ENSPANG00000009247	TRMT1	89	77.513	Papio_anubis
ENSSHAG00000014381	TRMT1	94	68.761	ENSPKIG00000005309	trmt1	84	69.272	Paramormyrops_kingsleyae
ENSSHAG00000014381	TRMT1	93	60.633	ENSPSIG00000008762	TRMT1	79	61.792	Pelodiscus_sinensis
ENSSHAG00000014381	TRMT1	97	67.233	ENSPMGG00000019764	trmt1	91	68.301	Periophthalmus_magnuspinnatus
ENSSHAG00000014381	TRMT1	99	74.318	ENSPEMG00000016247	Trmt1	88	76.621	Peromyscus_maniculatus_bairdii
ENSSHAG00000014381	TRMT1	96	59.727	ENSPMAG00000004329	trmt1	90	60.348	Petromyzon_marinus
ENSSHAG00000014381	TRMT1	99	91.790	ENSPCIG00000019273	TRMT1	90	93.414	Phascolarctos_cinereus
ENSSHAG00000014381	TRMT1	93	70.526	ENSPFOG00000008527	trmt1	88	70.848	Poecilia_formosa
ENSSHAG00000014381	TRMT1	93	70.351	ENSPLAG00000018788	trmt1	89	72.115	Poecilia_latipinna
ENSSHAG00000014381	TRMT1	96	68.114	ENSPMEG00000013120	trmt1	88	70.848	Poecilia_mexicana
ENSSHAG00000014381	TRMT1	96	67.731	ENSPREG00000000211	trmt1	85	70.495	Poecilia_reticulata
ENSSHAG00000014381	TRMT1	98	76.596	ENSPPYG00000009622	TRMT1	89	78.024	Pongo_abelii
ENSSHAG00000014381	TRMT1	94	71.649	ENSPCAG00000003698	TRMT1	88	71.750	Procavia_capensis
ENSSHAG00000014381	TRMT1	100	74.759	ENSPCOG00000008653	TRMT1	92	76.033	Propithecus_coquereli
ENSSHAG00000014381	TRMT1	98	77.100	ENSPVAG00000015076	TRMT1	89	78.535	Pteropus_vampyrus
ENSSHAG00000014381	TRMT1	93	64.510	ENSPNYG00000013960	trmt1	92	64.789	Pundamilia_nyererei
ENSSHAG00000014381	TRMT1	90	70.860	ENSPNAG00000024859	trmt1	89	71.097	Pygocentrus_nattereri
ENSSHAG00000014381	TRMT1	98	75.908	ENSRNOG00000002914	Trmt1	92	77.265	Rattus_norvegicus
ENSSHAG00000014381	TRMT1	97	57.825	ENSRBIG00000037505	-	91	58.874	Rhinopithecus_bieti
ENSSHAG00000014381	TRMT1	99	74.960	ENSRBIG00000038324	TRMT1	89	77.172	Rhinopithecus_bieti
ENSSHAG00000014381	TRMT1	99	74.798	ENSRROG00000028599	TRMT1	89	77.002	Rhinopithecus_roxellana
ENSSHAG00000014381	TRMT1	97	57.496	ENSRROG00000031847	-	90	58.532	Rhinopithecus_roxellana
ENSSHAG00000014381	TRMT1	83	36.704	YDR120C	-	92	36.704	Saccharomyces_cerevisiae
ENSSHAG00000014381	TRMT1	98	72.250	ENSSBOG00000028861	TRMT1	92	74.564	Saimiri_boliviensis_boliviensis
ENSSHAG00000014381	TRMT1	94	68.977	ENSSFOG00015004139	trmt1	84	69.527	Scleropages_formosus
ENSSHAG00000014381	TRMT1	93	68.586	ENSSMAG00000021136	trmt1	85	68.586	Scophthalmus_maximus
ENSSHAG00000014381	TRMT1	97	67.454	ENSSDUG00000012740	trmt1	84	69.366	Seriola_dumerili
ENSSHAG00000014381	TRMT1	97	67.116	ENSSLDG00000005971	trmt1	84	69.014	Seriola_lalandi_dorsalis
ENSSHAG00000014381	TRMT1	88	74.955	ENSSARG00000005138	TRMT1	93	76.083	Sorex_araneus
ENSSHAG00000014381	TRMT1	95	54.545	ENSSPUG00000001084	TRMT1	91	54.861	Sphenodon_punctatus
ENSSHAG00000014381	TRMT1	94	65.972	ENSSPAG00000007153	trmt1	94	66.373	Stegastes_partitus
ENSSHAG00000014381	TRMT1	99	76.748	ENSSSCG00000013744	TRMT1	90	79.652	Sus_scrofa
ENSSHAG00000014381	TRMT1	93	63.979	ENSTRUG00000010700	trmt1	86	64.747	Takifugu_rubripes
ENSSHAG00000014381	TRMT1	95	67.764	ENSTNIG00000018808	trmt1	98	68.607	Tetraodon_nigroviridis
ENSSHAG00000014381	TRMT1	99	73.008	ENSTTRG00000006379	TRMT1	89	74.617	Tursiops_truncatus
ENSSHAG00000014381	TRMT1	100	75.080	ENSUAMG00000022911	TRMT1	94	74.742	Ursus_americanus
ENSSHAG00000014381	TRMT1	97	75.993	ENSUMAG00000006027	TRMT1	92	77.342	Ursus_maritimus
ENSSHAG00000014381	TRMT1	100	75.884	ENSVVUG00000024177	TRMT1	89	78.535	Vulpes_vulpes
ENSSHAG00000014381	TRMT1	75	71.367	ENSXETG00000033863	TRMT1	92	71.367	Xenopus_tropicalis
ENSSHAG00000014381	TRMT1	96	67.446	ENSXCOG00000015733	trmt1	88	70.299	Xiphophorus_couchianus
ENSSHAG00000014381	TRMT1	94	69.527	ENSXMAG00000013823	trmt1	98	70.194	Xiphophorus_maculatus