EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000014412 (Gene tree)
Gene ID: 100913868
Gene Symbol: CHD3
Alias: Mi-2a|Mi2-ALPHA|ZFH
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 24879 bases
Position: chrGL856861.1:1477186-1502064
Accession: 1918
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000016947	ResIII	PF04851.15	2.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000017089	CHD3-201	7856	-	ENSSHAP00000016947	1917 (aa)	-	G3WNE2

Gene Model

Click here to download ENSSHAG00000014412's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000014412's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000014412	CHD3	93	65.289	ENSSHAG00000018641	CHD5	99	65.018
ENSSHAG00000014412	CHD3	72	89.286	ENSSHAG00000015079	-	90	89.286

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000014412	CHD3	100	94.912	ENSG00000170004	CHD3	98	94.912	Homo_sapiens
ENSSHAG00000014412	CHD3	86	76.467	ENSAPOG00000005614	chd3	97	76.707	Acanthochromis_polyacanthus
ENSSHAG00000014412	CHD3	69	91.429	ENSAMEG00000003025	-	100	91.502	Ailuropoda_melanoleuca
ENSSHAG00000014412	CHD3	86	76.311	ENSACIG00000019671	chd3	99	76.974	Amphilophus_citrinellus
ENSSHAG00000014412	CHD3	93	80.479	ENSAOCG00000023784	chd3	99	78.065	Amphiprion_ocellaris
ENSSHAG00000014412	CHD3	93	80.137	ENSAPEG00000006341	chd3	96	72.741	Amphiprion_percula
ENSSHAG00000014412	CHD3	93	80.412	ENSATEG00000000848	chd3	99	74.761	Anabas_testudineus
ENSSHAG00000014412	CHD3	99	84.227	ENSACAG00000004276	CHD3	95	83.876	Anolis_carolinensis
ENSSHAG00000014412	CHD3	100	91.952	ENSANAG00000034323	CHD3	99	93.078	Aotus_nancymaae
ENSSHAG00000014412	CHD3	78	76.800	ENSACLG00000009222	chd3	99	74.921	Astatotilapia_calliptera
ENSSHAG00000014412	CHD3	100	92.606	ENSBTAG00000014377	CHD3	97	92.764	Bos_taurus
ENSSHAG00000014412	CHD3	100	94.912	ENSCJAG00000014766	CHD3	98	94.912	Callithrix_jacchus
ENSSHAG00000014412	CHD3	100	92.704	ENSCAFG00000016859	CHD3	98	92.602	Canis_familiaris
ENSSHAG00000014412	CHD3	96	94.089	ENSCAFG00020007422	CHD3	99	93.980	Canis_lupus_dingo
ENSSHAG00000014412	CHD3	100	92.959	ENSCHIG00000016737	CHD3	99	92.959	Capra_hircus
ENSSHAG00000014412	CHD3	100	94.808	ENSTSYG00000035658	CHD3	98	94.808	Carlito_syrichta
ENSSHAG00000014412	CHD3	100	90.561	ENSCAPG00000014864	CHD3	98	90.561	Cavia_aperea
ENSSHAG00000014412	CHD3	100	92.959	ENSCPOG00000022653	CHD3	98	92.959	Cavia_porcellus
ENSSHAG00000014412	CHD3	100	94.912	ENSCCAG00000034792	CHD3	98	93.265	Cebus_capucinus
ENSSHAG00000014412	CHD3	100	94.912	ENSCATG00000041717	CHD3	98	94.912	Cercocebus_atys
ENSSHAG00000014412	CHD3	100	94.808	ENSCLAG00000010523	CHD3	99	94.808	Chinchilla_lanigera
ENSSHAG00000014412	CHD3	100	93.010	ENSCSAG00000011122	CHD3	99	93.010	Chlorocebus_sabaeus
ENSSHAG00000014412	CHD3	91	84.518	ENSCPBG00000011966	CHD3	99	87.605	Chrysemys_picta_bellii
ENSSHAG00000014412	CHD3	100	94.808	ENSCANG00000037641	CHD3	98	94.808	Colobus_angolensis_palliatus
ENSSHAG00000014412	CHD3	100	94.188	ENSCGRG00001011306	Chd3	99	94.084	Cricetulus_griseus_chok1gshd
ENSSHAG00000014412	CHD3	94	96.094	ENSCGRG00000007878	Chd3	99	96.094	Cricetulus_griseus_crigri
ENSSHAG00000014412	CHD3	93	79.208	ENSCSEG00000004489	chd3	99	74.211	Cynoglossus_semilaevis
ENSSHAG00000014412	CHD3	89	82.996	ENSCVAG00000007293	chd3	99	75.013	Cyprinodon_variegatus
ENSSHAG00000014412	CHD3	98	76.070	ENSDARG00000021405	chd3	99	76.361	Danio_rerio
ENSSHAG00000014412	CHD3	100	78.873	ENSDNOG00000047846	CHD3	91	87.351	Dasypus_novemcinctus
ENSSHAG00000014412	CHD3	100	94.185	ENSDORG00000010713	Chd3	99	94.133	Dipodomys_ordii
ENSSHAG00000014412	CHD3	98	87.188	ENSETEG00000017733	CHD3	99	87.188	Echinops_telfairi
ENSSHAG00000014412	CHD3	72	77.900	ENSEBUG00000008310	chd3	99	70.430	Eptatretus_burgeri
ENSSHAG00000014412	CHD3	93	92.966	ENSEASG00005019360	CHD3	100	92.912	Equus_asinus_asinus
ENSSHAG00000014412	CHD3	93	92.857	ENSECAG00000010051	CHD3	100	92.857	Equus_caballus
ENSSHAG00000014412	CHD3	92	86.441	ENSEEUG00000015205	CHD3	92	86.441	Erinaceus_europaeus
ENSSHAG00000014412	CHD3	82	79.330	ENSELUG00000019499	chd3	99	80.000	Esox_lucius
ENSSHAG00000014412	CHD3	100	92.857	ENSFCAG00000009629	CHD3	95	92.602	Felis_catus
ENSSHAG00000014412	CHD3	100	90.816	ENSFDAG00000008220	CHD3	98	90.765	Fukomys_damarensis
ENSSHAG00000014412	CHD3	91	80.203	ENSGMOG00000013599	chd3	91	80.812	Gadus_morhua
ENSSHAG00000014412	CHD3	61	74.169	ENSGAFG00000004055	chd3	99	76.345	Gambusia_affinis
ENSSHAG00000014412	CHD3	99	70.513	ENSGACG00000019275	chd3	100	70.520	Gasterosteus_aculeatus
ENSSHAG00000014412	CHD3	76	86.472	ENSGAGG00000013164	CHD3	98	86.608	Gopherus_agassizii
ENSSHAG00000014412	CHD3	100	94.808	ENSGGOG00000013496	CHD3	98	94.808	Gorilla_gorilla
ENSSHAG00000014412	CHD3	100	94.704	ENSHGLG00000012017	CHD3	99	93.010	Heterocephalus_glaber_female
ENSSHAG00000014412	CHD3	89	87.293	ENSHGLG00100013902	CHD3	99	86.811	Heterocephalus_glaber_male
ENSSHAG00000014412	CHD3	95	72.025	ENSHCOG00000010170	chd3	96	72.607	Hippocampus_comes
ENSSHAG00000014412	CHD3	92	74.082	ENSIPUG00000003271	chd3	96	74.704	Ictalurus_punctatus
ENSSHAG00000014412	CHD3	100	94.964	ENSSTOG00000025907	CHD3	99	94.964	Ictidomys_tridecemlineatus
ENSSHAG00000014412	CHD3	100	94.029	ENSJJAG00000017633	Chd3	99	93.925	Jaculus_jaculus
ENSSHAG00000014412	CHD3	96	74.756	ENSKMAG00000019292	chd3	97	75.636	Kryptolebias_marmoratus
ENSSHAG00000014412	CHD3	95	72.104	ENSLBEG00000028485	chd3	94	70.997	Labrus_bergylta
ENSSHAG00000014412	CHD3	97	75.051	ENSLACG00000008031	CHD3	98	74.962	Latimeria_chalumnae
ENSSHAG00000014412	CHD3	99	76.853	ENSLOCG00000013965	chd3	97	77.103	Lepisosteus_oculatus
ENSSHAG00000014412	CHD3	91	93.842	ENSLAFG00000000572	CHD3	99	89.776	Loxodonta_africana
ENSSHAG00000014412	CHD3	100	94.912	ENSMFAG00000020113	CHD3	98	94.912	Macaca_fascicularis
ENSSHAG00000014412	CHD3	100	91.198	ENSMMUG00000022221	CHD3	98	91.658	Macaca_mulatta
ENSSHAG00000014412	CHD3	100	94.860	ENSMNEG00000001728	CHD3	98	94.860	Macaca_nemestrina
ENSSHAG00000014412	CHD3	100	94.912	ENSMLEG00000032249	CHD3	98	94.912	Mandrillus_leucophaeus
ENSSHAG00000014412	CHD3	86	77.075	ENSMAMG00000000564	chd3	99	77.433	Mastacembelus_armatus
ENSSHAG00000014412	CHD3	100	93.928	ENSMAUG00000013873	Chd3	96	93.825	Mesocricetus_auratus
ENSSHAG00000014412	CHD3	100	92.959	ENSMICG00000008741	CHD3	98	90.464	Microcebus_murinus
ENSSHAG00000014412	CHD3	100	94.188	ENSMOCG00000004848	Chd3	99	94.032	Microtus_ochrogaster
ENSSHAG00000014412	CHD3	96	74.650	ENSMMOG00000012699	chd3	99	74.332	Mola_mola
ENSSHAG00000014412	CHD3	93	98.269	ENSMODG00000007509	CHD3	100	98.269	Monodelphis_domestica
ENSSHAG00000014412	CHD3	100	93.727	MGP_CAROLIEiJ_G0016564	Chd3	100	93.906	Mus_caroli
ENSSHAG00000014412	CHD3	100	93.779	ENSMUSG00000018474	Chd3	99	93.959	Mus_musculus
ENSSHAG00000014412	CHD3	100	93.831	MGP_PahariEiJ_G0017695	Chd3	100	94.062	Mus_pahari
ENSSHAG00000014412	CHD3	100	93.831	MGP_SPRETEiJ_G0017400	Chd3	100	93.959	Mus_spretus
ENSSHAG00000014412	CHD3	87	92.653	ENSMPUG00000008861	CHD3	100	92.711	Mustela_putorius_furo
ENSSHAG00000014412	CHD3	100	92.559	ENSMLUG00000014643	-	98	92.355	Myotis_lucifugus
ENSSHAG00000014412	CHD3	100	92.806	ENSNGAG00000000773	Chd3	98	92.806	Nannospalax_galili
ENSSHAG00000014412	CHD3	86	76.545	ENSNBRG00000000636	chd3	97	76.905	Neolamprologus_brichardi
ENSSHAG00000014412	CHD3	98	92.418	ENSNLEG00000009770	CHD3	98	92.418	Nomascus_leucogenys
ENSSHAG00000014412	CHD3	87	94.412	ENSMEUG00000005852	CHD3	87	94.412	Notamacropus_eugenii
ENSSHAG00000014412	CHD3	96	91.827	ENSOPRG00000011069	CHD3	100	91.774	Ochotona_princeps
ENSSHAG00000014412	CHD3	100	92.806	ENSODEG00000017785	CHD3	99	92.857	Octodon_degus
ENSSHAG00000014412	CHD3	97	74.935	ENSONIG00000009292	chd3	100	74.974	Oreochromis_niloticus
ENSSHAG00000014412	CHD3	99	88.155	ENSOCUG00000029299	CHD3	100	88.364	Oryctolagus_cuniculus
ENSSHAG00000014412	CHD3	83	71.552	ENSORLG00000007107	chd3	93	71.798	Oryzias_latipes
ENSSHAG00000014412	CHD3	59	72.896	ENSORLG00020008387	chd3	95	73.428	Oryzias_latipes_hni
ENSSHAG00000014412	CHD3	73	80.000	ENSOMEG00000013691	chd3	99	78.175	Oryzias_melastigma
ENSSHAG00000014412	CHD3	100	92.602	ENSOGAG00000003216	CHD3	99	92.602	Otolemur_garnettii
ENSSHAG00000014412	CHD3	100	90.914	ENSOARG00000017855	CHD3	98	90.863	Ovis_aries
ENSSHAG00000014412	CHD3	100	92.532	ENSPPAG00000032886	CHD3	98	92.532	Pan_paniscus
ENSSHAG00000014412	CHD3	100	94.704	ENSPPRG00000000626	CHD3	98	94.444	Panthera_pardus
ENSSHAG00000014412	CHD3	100	94.964	ENSPTRG00000008714	CHD3	98	94.964	Pan_troglodytes
ENSSHAG00000014412	CHD3	100	93.265	ENSPANG00000023938	CHD3	98	93.265	Papio_anubis
ENSSHAG00000014412	CHD3	95	80.443	ENSPKIG00000006305	chd3	99	80.443	Paramormyrops_kingsleyae
ENSSHAG00000014412	CHD3	56	90.055	ENSPSIG00000010177	CHD3	98	90.328	Pelodiscus_sinensis
ENSSHAG00000014412	CHD3	100	92.453	ENSPEMG00000014262	Chd3	99	92.351	Peromyscus_maniculatus_bairdii
ENSSHAG00000014412	CHD3	100	98.029	ENSPCIG00000005442	CHD3	99	97.408	Phascolarctos_cinereus
ENSSHAG00000014412	CHD3	97	77.064	ENSPFOG00000012464	chd3	92	73.618	Poecilia_formosa
ENSSHAG00000014412	CHD3	94	72.835	ENSPLAG00000002887	chd3	98	72.399	Poecilia_latipinna
ENSSHAG00000014412	CHD3	55	80.908	ENSPMEG00000016725	chd3	94	73.501	Poecilia_mexicana
ENSSHAG00000014412	CHD3	97	76.251	ENSPREG00000011044	chd3	99	75.732	Poecilia_reticulata
ENSSHAG00000014412	CHD3	98	90.419	ENSPPYG00000007940	CHD3	98	90.419	Pongo_abelii
ENSSHAG00000014412	CHD3	96	92.614	ENSPCAG00000004350	CHD3	96	92.424	Procavia_capensis
ENSSHAG00000014412	CHD3	100	94.704	ENSPCOG00000020952	CHD3	98	92.963	Propithecus_coquereli
ENSSHAG00000014412	CHD3	86	91.843	ENSPVAG00000016344	CHD3	86	91.747	Pteropus_vampyrus
ENSSHAG00000014412	CHD3	99	78.399	ENSPNAG00000020393	chd3	98	81.487	Pygocentrus_nattereri
ENSSHAG00000014412	CHD3	93	91.671	ENSRNOG00000009722	Chd3	100	91.562	Rattus_norvegicus
ENSSHAG00000014412	CHD3	100	91.902	ENSRBIG00000033562	CHD3	98	91.748	Rhinopithecus_bieti
ENSSHAG00000014412	CHD3	100	94.912	ENSRROG00000029554	CHD3	98	94.912	Rhinopithecus_roxellana
ENSSHAG00000014412	CHD3	100	94.964	ENSSBOG00000020719	CHD3	98	94.964	Saimiri_boliviensis_boliviensis
ENSSHAG00000014412	CHD3	88	81.140	ENSSFOG00015023123	chd3	98	73.188	Scleropages_formosus
ENSSHAG00000014412	CHD3	88	81.818	ENSSMAG00000006451	chd3	99	77.191	Scophthalmus_maximus
ENSSHAG00000014412	CHD3	56	72.811	ENSSDUG00000005792	chd3	95	73.917	Seriola_dumerili
ENSSHAG00000014412	CHD3	93	80.137	ENSSPAG00000013694	chd3	99	76.190	Stegastes_partitus
ENSSHAG00000014412	CHD3	100	92.810	ENSSSCG00000021363	CHD3	100	92.534	Sus_scrofa
ENSSHAG00000014412	CHD3	77	76.518	ENSTRUG00000014990	chd3	89	76.140	Takifugu_rubripes
ENSSHAG00000014412	CHD3	98	73.473	ENSTNIG00000012998	chd3	99	73.517	Tetraodon_nigroviridis
ENSSHAG00000014412	CHD3	65	97.129	ENSTBEG00000011454	-	71	97.129	Tupaia_belangeri
ENSSHAG00000014412	CHD3	98	92.780	ENSTTRG00000010295	CHD3	96	92.844	Tursiops_truncatus
ENSSHAG00000014412	CHD3	93	91.458	ENSUAMG00000005475	CHD3	99	91.567	Ursus_americanus
ENSSHAG00000014412	CHD3	57	98.148	ENSVPAG00000010794	-	62	98.148	Vicugna_pacos
ENSSHAG00000014412	CHD3	96	94.685	ENSVVUG00000028011	CHD3	99	92.279	Vulpes_vulpes
ENSSHAG00000014412	CHD3	99	72.041	ENSXETG00000012991	chd3	92	73.428	Xenopus_tropicalis
ENSSHAG00000014412	CHD3	53	82.300	ENSXCOG00000000809	chd3	96	82.525	Xiphophorus_couchianus
ENSSHAG00000014412	CHD3	81	86.705	ENSXMAG00000016035	chd3	99	86.705	Xiphophorus_maculatus