EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000014474 (Gene tree)
Gene ID: 100930726
Gene Symbol: LARP1B
Alias: DKFZp434K245|DKFZp686E0316|FLJ10378|LARP2
Full Name: La ribonucleoprotein domain family member 1B
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 57104 bases
Position: chrGL864725.1:1492306-1549409
Accession: 24704
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000017029	La	PF05383.17	1.8e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000017171	LARP1B-201	2016	-	ENSSHAP00000017029	670 (aa)	-	G3WNM4

Gene Model

Click here to download ENSSHAG00000014474's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000014474's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000014474	LARP1B	99	58.866	ENSSHAG00000011115	LARP1	71	58.576

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000014474	LARP1B	100	84.478	ENSG00000138709	LARP1B	98	86.667	Homo_sapiens
ENSSHAG00000014474	LARP1B	99	52.482	ENSAPOG00000020101	larp1b	62	52.017	Acanthochromis_polyacanthus
ENSSHAG00000014474	LARP1B	83	87.884	ENSAMEG00000002748	LARP1B	100	87.703	Ailuropoda_melanoleuca
ENSSHAG00000014474	LARP1B	99	50.576	ENSACIG00000023890	larp1b	59	50.000	Amphilophus_citrinellus
ENSSHAG00000014474	LARP1B	99	52.757	ENSAOCG00000014268	larp1b	68	53.254	Amphiprion_ocellaris
ENSSHAG00000014474	LARP1B	99	53.813	ENSAPEG00000004126	larp1b	61	53.182	Amphiprion_percula
ENSSHAG00000014474	LARP1B	99	52.874	ENSATEG00000017849	larp1b	62	53.571	Anabas_testudineus
ENSSHAG00000014474	LARP1B	99	69.320	ENSAPLG00000010129	LARP1B	74	69.408	Anas_platyrhynchos
ENSSHAG00000014474	LARP1B	99	77.695	ENSACAG00000011338	LARP1B	67	77.794	Anolis_carolinensis
ENSSHAG00000014474	LARP1B	100	77.910	ENSANAG00000034618	LARP1B	96	74.545	Aotus_nancymaae
ENSSHAG00000014474	LARP1B	99	51.709	ENSACLG00000011948	larp1b	61	51.983	Astatotilapia_calliptera
ENSSHAG00000014474	LARP1B	99	48.494	ENSAMXG00000006805	larp1b	61	50.143	Astyanax_mexicanus
ENSSHAG00000014474	LARP1B	99	84.731	ENSBTAG00000012135	LARP1B	98	85.243	Bos_taurus
ENSSHAG00000014474	LARP1B	99	83.784	ENSCJAG00000003338	LARP1B	98	88.182	Callithrix_jacchus
ENSSHAG00000014474	LARP1B	99	86.248	ENSCAFG00000003831	LARP1B	73	85.417	Canis_familiaris
ENSSHAG00000014474	LARP1B	99	86.357	ENSCAFG00020018899	LARP1B	98	88.788	Canis_lupus_dingo
ENSSHAG00000014474	LARP1B	99	84.731	ENSCHIG00000023144	LARP1B	98	86.707	Capra_hircus
ENSSHAG00000014474	LARP1B	100	84.478	ENSCCAG00000021948	LARP1B	98	87.576	Cebus_capucinus
ENSSHAG00000014474	LARP1B	100	83.881	ENSCATG00000013541	LARP1B	99	83.658	Cercocebus_atys
ENSSHAG00000014474	LARP1B	100	84.970	ENSCSAG00000003582	LARP1B	73	84.226	Chlorocebus_sabaeus
ENSSHAG00000014474	LARP1B	99	79.042	ENSCHOG00000005354	LARP1B	76	78.390	Choloepus_hoffmanni
ENSSHAG00000014474	LARP1B	99	82.960	ENSCPBG00000017480	LARP1B	62	83.185	Chrysemys_picta_bellii
ENSSHAG00000014474	LARP1B	100	78.846	ENSCANG00000026958	LARP1B	99	77.821	Colobus_angolensis_palliatus
ENSSHAG00000014474	LARP1B	99	49.510	ENSCSEG00000013519	larp1b	62	50.070	Cynoglossus_semilaevis
ENSSHAG00000014474	LARP1B	99	52.908	ENSCVAG00000005046	larp1b	62	52.825	Cyprinodon_variegatus
ENSSHAG00000014474	LARP1B	99	48.271	ENSDARG00000061169	larp1b	58	49.713	Danio_rerio
ENSSHAG00000014474	LARP1B	76	86.914	ENSDNOG00000018765	-	99	87.109	Dasypus_novemcinctus
ENSSHAG00000014474	LARP1B	84	84.389	ENSETEG00000012497	LARP1B	61	84.034	Echinops_telfairi
ENSSHAG00000014474	LARP1B	99	47.275	ENSEBUG00000003668	larp1b	69	47.483	Eptatretus_burgeri
ENSSHAG00000014474	LARP1B	99	85.157	ENSEASG00005018106	LARP1B	98	88.788	Equus_asinus_asinus
ENSSHAG00000014474	LARP1B	99	85.007	ENSECAG00000001088	LARP1B	59	84.776	Equus_caballus
ENSSHAG00000014474	LARP1B	71	52.362	ENSELUG00000023774	larp1b	80	46.011	Esox_lucius
ENSSHAG00000014474	LARP1B	77	87.549	ENSFCAG00000014650	-	98	88.182	Felis_catus
ENSSHAG00000014474	LARP1B	99	70.746	ENSFALG00000008098	LARP1B	72	71.025	Ficedula_albicollis
ENSSHAG00000014474	LARP1B	99	52.273	ENSFHEG00000010264	larp1b	60	52.260	Fundulus_heteroclitus
ENSSHAG00000014474	LARP1B	77	75.472	ENSGMOG00000005207	larp1b	50	75.000	Gadus_morhua
ENSSHAG00000014474	LARP1B	99	71.343	ENSGALG00000010207	LARP1B	64	71.620	Gallus_gallus
ENSSHAG00000014474	LARP1B	91	54.331	ENSGAFG00000012012	larp1b	68	54.304	Gambusia_affinis
ENSSHAG00000014474	LARP1B	99	49.640	ENSGACG00000004609	larp1b	62	50.570	Gasterosteus_aculeatus
ENSSHAG00000014474	LARP1B	99	82.388	ENSGAGG00000017209	LARP1B	62	82.615	Gopherus_agassizii
ENSSHAG00000014474	LARP1B	100	84.627	ENSGGOG00000015900	LARP1B	98	86.667	Gorilla_gorilla
ENSSHAG00000014474	LARP1B	99	52.137	ENSHBUG00000009730	larp1b	61	52.408	Haplochromis_burtoni
ENSSHAG00000014474	LARP1B	50	82.883	ENSHGLG00100014041	-	95	82.883	Heterocephalus_glaber_male
ENSSHAG00000014474	LARP1B	70	56.695	ENSHCOG00000000918	larp1b	64	57.054	Hippocampus_comes
ENSSHAG00000014474	LARP1B	99	49.148	ENSIPUG00000012138	larp1b	58	49.642	Ictalurus_punctatus
ENSSHAG00000014474	LARP1B	99	50.646	ENSKMAG00000011589	larp1b	63	50.568	Kryptolebias_marmoratus
ENSSHAG00000014474	LARP1B	99	52.841	ENSLBEG00000005655	larp1b	62	53.315	Labrus_bergylta
ENSSHAG00000014474	LARP1B	99	74.102	ENSLACG00000015247	LARP1B	99	74.169	Latimeria_chalumnae
ENSSHAG00000014474	LARP1B	99	63.248	ENSLOCG00000010684	larp1b	69	65.395	Lepisosteus_oculatus
ENSSHAG00000014474	LARP1B	100	85.373	ENSMFAG00000002218	LARP1B	98	87.879	Macaca_fascicularis
ENSSHAG00000014474	LARP1B	100	85.373	ENSMMUG00000021347	LARP1B	98	87.879	Macaca_mulatta
ENSSHAG00000014474	LARP1B	84	85.000	ENSMNEG00000030406	LARP1B	68	85.000	Macaca_nemestrina
ENSSHAG00000014474	LARP1B	100	80.000	ENSMLEG00000009306	LARP1B	72	80.448	Mandrillus_leucophaeus
ENSSHAG00000014474	LARP1B	99	53.495	ENSMAMG00000000081	larp1b	63	53.901	Mastacembelus_armatus
ENSSHAG00000014474	LARP1B	71	56.879	ENSMZEG00005002545	larp1b	90	54.505	Maylandia_zebra
ENSSHAG00000014474	LARP1B	99	59.915	ENSMGAG00000004809	LARP1B	76	59.161	Meleagris_gallopavo
ENSSHAG00000014474	LARP1B	50	74.260	ENSMICG00000037883	-	91	73.964	Microcebus_murinus
ENSSHAG00000014474	LARP1B	99	88.156	ENSMICG00000036111	LARP1B	98	90.303	Microcebus_murinus
ENSSHAG00000014474	LARP1B	76	67.126	ENSMICG00000028052	-	99	66.148	Microcebus_murinus
ENSSHAG00000014474	LARP1B	100	97.168	ENSMODG00000012300	LARP1B	59	97.168	Monodelphis_domestica
ENSSHAG00000014474	LARP1B	99	52.211	ENSMALG00000003638	larp1b	62	52.199	Monopterus_albus
ENSSHAG00000014474	LARP1B	53	83.569	MGP_CAROLIEiJ_G0024962	Larp1b	98	85.152	Mus_caroli
ENSSHAG00000014474	LARP1B	51	85.841	ENSMUSG00000025762	Larp1b	98	86.364	Mus_musculus
ENSSHAG00000014474	LARP1B	51	85.251	MGP_PahariEiJ_G0026403	Larp1b	98	86.364	Mus_pahari
ENSSHAG00000014474	LARP1B	51	85.841	MGP_SPRETEiJ_G0025897	Larp1b	98	86.364	Mus_spretus
ENSSHAG00000014474	LARP1B	100	86.418	ENSMPUG00000017365	LARP1B	59	86.269	Mustela_putorius_furo
ENSSHAG00000014474	LARP1B	99	77.011	ENSMLUG00000010229	LARP1B	74	76.681	Myotis_lucifugus
ENSSHAG00000014474	LARP1B	74	56.225	ENSNBRG00000023846	larp1b	59	54.007	Neolamprologus_brichardi
ENSSHAG00000014474	LARP1B	100	84.776	ENSNLEG00000013819	LARP1B	98	86.970	Nomascus_leucogenys
ENSSHAG00000014474	LARP1B	82	96.190	ENSMEUG00000010308	LARP1B	61	96.190	Notamacropus_eugenii
ENSSHAG00000014474	LARP1B	98	65.350	ENSOPRG00000005478	LARP1B	71	64.840	Ochotona_princeps
ENSSHAG00000014474	LARP1B	99	53.032	ENSONIG00000012386	larp1b	71	52.454	Oreochromis_niloticus
ENSSHAG00000014474	LARP1B	100	84.776	ENSOCUG00000013330	LARP1B	71	84.776	Oryctolagus_cuniculus
ENSSHAG00000014474	LARP1B	99	51.580	ENSORLG00000017954	larp1b	61	51.286	Oryzias_latipes
ENSSHAG00000014474	LARP1B	99	51.724	ENSORLG00020013081	larp1b	61	51.429	Oryzias_latipes_hni
ENSSHAG00000014474	LARP1B	99	52.155	ENSORLG00015009580	larp1b	61	51.714	Oryzias_latipes_hsok
ENSSHAG00000014474	LARP1B	99	50.647	ENSOMEG00000004210	larp1b	61	51.783	Oryzias_melastigma
ENSSHAG00000014474	LARP1B	99	84.281	ENSOGAG00000005771	LARP1B	74	84.203	Otolemur_garnettii
ENSSHAG00000014474	LARP1B	99	84.281	ENSOARG00000015300	LARP1B	73	84.054	Ovis_aries
ENSSHAG00000014474	LARP1B	100	84.328	ENSPPAG00000030439	LARP1B	98	86.364	Pan_paniscus
ENSSHAG00000014474	LARP1B	77	87.549	ENSPPRG00000002743	-	98	88.182	Panthera_pardus
ENSSHAG00000014474	LARP1B	77	87.549	ENSPTIG00000011225	LARP1B	98	88.182	Panthera_tigris_altaica
ENSSHAG00000014474	LARP1B	100	84.478	ENSPTRG00000016437	LARP1B	98	86.061	Pan_troglodytes
ENSSHAG00000014474	LARP1B	100	85.373	ENSPANG00000012488	LARP1B	98	87.576	Papio_anubis
ENSSHAG00000014474	LARP1B	90	48.718	ENSPKIG00000014360	larp1b	64	49.675	Paramormyrops_kingsleyae
ENSSHAG00000014474	LARP1B	99	81.493	ENSPSIG00000012885	LARP1B	70	80.535	Pelodiscus_sinensis
ENSSHAG00000014474	LARP1B	71	58.910	ENSPMGG00000007207	larp1b	54	58.212	Periophthalmus_magnuspinnatus
ENSSHAG00000014474	LARP1B	70	53.045	ENSPMAG00000002700	larp1b	73	50.208	Petromyzon_marinus
ENSSHAG00000014474	LARP1B	99	95.352	ENSPCIG00000026516	LARP1B	90	93.878	Phascolarctos_cinereus
ENSSHAG00000014474	LARP1B	99	51.928	ENSPFOG00000019519	larp1b	62	51.507	Poecilia_formosa
ENSSHAG00000014474	LARP1B	76	52.294	ENSPFOG00000022837	-	78	52.661	Poecilia_formosa
ENSSHAG00000014474	LARP1B	99	53.352	ENSPLAG00000007115	larp1b	61	53.333	Poecilia_latipinna
ENSSHAG00000014474	LARP1B	99	53.219	ENSPMEG00000001224	larp1b	61	52.774	Poecilia_mexicana
ENSSHAG00000014474	LARP1B	99	81.859	ENSPCAG00000007546	LARP1B	73	81.194	Procavia_capensis
ENSSHAG00000014474	LARP1B	100	87.761	ENSPCOG00000021874	LARP1B	98	90.274	Propithecus_coquereli
ENSSHAG00000014474	LARP1B	99	81.709	ENSPVAG00000005373	LARP1B	73	81.493	Pteropus_vampyrus
ENSSHAG00000014474	LARP1B	71	58.281	ENSPNYG00000017357	larp1b	65	55.659	Pundamilia_nyererei
ENSSHAG00000014474	LARP1B	99	49.351	ENSPNAG00000008823	larp1b	60	50.364	Pygocentrus_nattereri
ENSSHAG00000014474	LARP1B	77	84.047	ENSRBIG00000039982	-	98	84.545	Rhinopithecus_bieti
ENSSHAG00000014474	LARP1B	100	85.522	ENSRROG00000030771	LARP1B	98	87.879	Rhinopithecus_roxellana
ENSSHAG00000014474	LARP1B	99	51.416	ENSSMAG00000006347	larp1b	68	51.613	Scophthalmus_maximus
ENSSHAG00000014474	LARP1B	99	52.149	ENSSDUG00000004182	larp1b	61	51.994	Seriola_dumerili
ENSSHAG00000014474	LARP1B	95	68.847	ENSSPUG00000011837	LARP1B	74	80.038	Sphenodon_punctatus
ENSSHAG00000014474	LARP1B	99	53.210	ENSSPAG00000017772	larp1b	62	53.759	Stegastes_partitus
ENSSHAG00000014474	LARP1B	99	83.508	ENSSSCG00000034280	LARP1B	98	84.436	Sus_scrofa
ENSSHAG00000014474	LARP1B	98	62.957	ENSTGUG00000002098	-	70	65.554	Taeniopygia_guttata
ENSSHAG00000014474	LARP1B	99	50.218	ENSTRUG00000005612	larp1b	61	50.000	Takifugu_rubripes
ENSSHAG00000014474	LARP1B	99	49.443	ENSTNIG00000012398	larp1b	71	50.069	Tetraodon_nigroviridis
ENSSHAG00000014474	LARP1B	77	86.667	ENSTBEG00000004177	LARP1B	57	80.952	Tupaia_belangeri
ENSSHAG00000014474	LARP1B	95	78.997	ENSTTRG00000012984	LARP1B	69	78.370	Tursiops_truncatus
ENSSHAG00000014474	LARP1B	99	86.207	ENSUMAG00000007373	LARP1B	71	86.119	Ursus_maritimus
ENSSHAG00000014474	LARP1B	100	77.164	ENSVPAG00000007223	LARP1B	73	76.866	Vicugna_pacos
ENSSHAG00000014474	LARP1B	99	86.057	ENSVVUG00000011307	LARP1B	99	88.258	Vulpes_vulpes
ENSSHAG00000014474	LARP1B	99	54.142	ENSXETG00000022512	larp1b	64	55.900	Xenopus_tropicalis
ENSSHAG00000014474	LARP1B	66	54.667	ENSXCOG00000004435	larp1b	51	49.365	Xiphophorus_couchianus
ENSSHAG00000014474	LARP1B	99	53.419	ENSXMAG00000008150	larp1b	61	53.541	Xiphophorus_maculatus