EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000014483 (Gene tree)
Gene ID: 100928515
Gene Symbol: SNRNP48
Alias: C6orf151|FLJ32234|dJ336K20B.1|dJ512B11.2
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 18793 bases
Position: chrGL841354.1:1495304-1514096
Accession: 100928515
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000017039	zf-U11-48K	PF05253.12	1.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000017181	SNRNP48-201	1893	-	ENSSHAP00000017039	348 (aa)	XP_012397110	G3WNN4

Gene Model

Click here to download ENSSHAG00000014483's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000014483's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000014483	SNRNP48	99	70.930	ENSG00000168566	SNRNP48	98	70.930	Homo_sapiens
ENSSHAG00000014483	SNRNP48	81	48.084	ENSAPOG00000021430	snrnp48	82	47.782	Acanthochromis_polyacanthus
ENSSHAG00000014483	SNRNP48	99	71.221	ENSAMEG00000017349	SNRNP48	98	71.221	Ailuropoda_melanoleuca
ENSSHAG00000014483	SNRNP48	89	44.481	ENSACIG00000002032	snrnp48	81	45.704	Amphilophus_citrinellus
ENSSHAG00000014483	SNRNP48	80	48.571	ENSAOCG00000010562	snrnp48	80	48.252	Amphiprion_ocellaris
ENSSHAG00000014483	SNRNP48	80	47.857	ENSAPEG00000003231	snrnp48	80	47.552	Amphiprion_percula
ENSSHAG00000014483	SNRNP48	82	47.569	ENSATEG00000020210	snrnp48	84	47.458	Anabas_testudineus
ENSSHAG00000014483	SNRNP48	84	71.429	ENSACAG00000002811	SNRNP48	77	72.984	Anolis_carolinensis
ENSSHAG00000014483	SNRNP48	99	70.640	ENSANAG00000033538	SNRNP48	98	70.640	Aotus_nancymaae
ENSSHAG00000014483	SNRNP48	93	44.817	ENSAMXG00000015309	snrnp48	96	43.228	Astyanax_mexicanus
ENSSHAG00000014483	SNRNP48	100	68.768	ENSBTAG00000001123	SNRNP48	99	68.768	Bos_taurus
ENSSHAG00000014483	SNRNP48	100	71.060	ENSCJAG00000021330	SNRNP48	99	71.060	Callithrix_jacchus
ENSSHAG00000014483	SNRNP48	99	71.221	ENSCAFG00000009574	SNRNP48	82	71.221	Canis_familiaris
ENSSHAG00000014483	SNRNP48	99	71.221	ENSCAFG00020013203	SNRNP48	97	71.221	Canis_lupus_dingo
ENSSHAG00000014483	SNRNP48	100	69.054	ENSCHIG00000015216	SNRNP48	99	69.054	Capra_hircus
ENSSHAG00000014483	SNRNP48	99	71.014	ENSTSYG00000000698	SNRNP48	98	71.014	Carlito_syrichta
ENSSHAG00000014483	SNRNP48	91	69.085	ENSCAPG00000006768	SNRNP48	99	69.085	Cavia_aperea
ENSSHAG00000014483	SNRNP48	99	70.640	ENSCPOG00000007910	SNRNP48	98	70.640	Cavia_porcellus
ENSSHAG00000014483	SNRNP48	99	70.058	ENSCCAG00000035652	SNRNP48	98	70.058	Cebus_capucinus
ENSSHAG00000014483	SNRNP48	99	70.640	ENSCATG00000033947	SNRNP48	98	70.640	Cercocebus_atys
ENSSHAG00000014483	SNRNP48	99	71.014	ENSCLAG00000003765	SNRNP48	98	71.014	Chinchilla_lanigera
ENSSHAG00000014483	SNRNP48	99	71.512	ENSCSAG00000007409	SNRNP48	98	71.512	Chlorocebus_sabaeus
ENSSHAG00000014483	SNRNP48	85	72.848	ENSCPBG00000019146	SNRNP48	91	72.848	Chrysemys_picta_bellii
ENSSHAG00000014483	SNRNP48	99	71.221	ENSCANG00000030017	SNRNP48	98	71.221	Colobus_angolensis_palliatus
ENSSHAG00000014483	SNRNP48	100	71.060	ENSCGRG00001001076	-	99	71.060	Cricetulus_griseus_chok1gshd
ENSSHAG00000014483	SNRNP48	99	55.977	ENSCGRG00001008805	-	82	57.383	Cricetulus_griseus_chok1gshd
ENSSHAG00000014483	SNRNP48	100	71.060	ENSCGRG00000007781	Snrnp48	99	71.060	Cricetulus_griseus_crigri
ENSSHAG00000014483	SNRNP48	75	45.420	ENSCSEG00000000722	snrnp48	78	44.251	Cynoglossus_semilaevis
ENSSHAG00000014483	SNRNP48	97	45.455	ENSCVAG00000019829	snrnp48	73	45.847	Cyprinodon_variegatus
ENSSHAG00000014483	SNRNP48	85	46.801	ENSDARG00000039989	snrnp48	83	46.801	Danio_rerio
ENSSHAG00000014483	SNRNP48	99	73.487	ENSDNOG00000014978	SNRNP48	99	73.487	Dasypus_novemcinctus
ENSSHAG00000014483	SNRNP48	99	67.151	ENSDORG00000015140	Snrnp48	98	67.151	Dipodomys_ordii
ENSSHAG00000014483	SNRNP48	99	70.640	ENSEASG00005012021	SNRNP48	98	70.640	Equus_asinus_asinus
ENSSHAG00000014483	SNRNP48	99	71.221	ENSECAG00000026937	SNRNP48	98	71.221	Equus_caballus
ENSSHAG00000014483	SNRNP48	99	54.203	ENSEEUG00000015437	SNRNP48	97	54.203	Erinaceus_europaeus
ENSSHAG00000014483	SNRNP48	86	48.333	ENSELUG00000009766	snrnp48	76	49.470	Esox_lucius
ENSSHAG00000014483	SNRNP48	99	72.093	ENSFCAG00000018853	SNRNP48	98	72.093	Felis_catus
ENSSHAG00000014483	SNRNP48	84	71.864	ENSFALG00000007797	SNRNP48	94	71.864	Ficedula_albicollis
ENSSHAG00000014483	SNRNP48	99	69.186	ENSFDAG00000009231	SNRNP48	98	69.186	Fukomys_damarensis
ENSSHAG00000014483	SNRNP48	57	53.465	ENSFHEG00000014647	snrnp48	82	51.261	Fundulus_heteroclitus
ENSSHAG00000014483	SNRNP48	91	43.963	ENSGMOG00000018599	-	86	45.329	Gadus_morhua
ENSSHAG00000014483	SNRNP48	78	72.426	ENSGALG00000013005	SNRNP48	84	72.510	Gallus_gallus
ENSSHAG00000014483	SNRNP48	80	48.410	ENSGAFG00000021639	snrnp48	81	47.635	Gambusia_affinis
ENSSHAG00000014483	SNRNP48	72	48.425	ENSGACG00000017756	-	86	47.138	Gasterosteus_aculeatus
ENSSHAG00000014483	SNRNP48	85	71.854	ENSGAGG00000000865	SNRNP48	97	71.854	Gopherus_agassizii
ENSSHAG00000014483	SNRNP48	99	71.221	ENSGGOG00000013220	SNRNP48	98	71.221	Gorilla_gorilla
ENSSHAG00000014483	SNRNP48	74	48.092	ENSHBUG00000017066	snrnp48	83	47.157	Haplochromis_burtoni
ENSSHAG00000014483	SNRNP48	99	70.640	ENSHGLG00000015241	SNRNP48	98	70.640	Heterocephalus_glaber_female
ENSSHAG00000014483	SNRNP48	99	70.640	ENSHGLG00100010027	SNRNP48	98	70.640	Heterocephalus_glaber_male
ENSSHAG00000014483	SNRNP48	70	46.341	ENSHCOG00000014066	snrnp48	82	43.986	Hippocampus_comes
ENSSHAG00000014483	SNRNP48	99	71.512	ENSSTOG00000014635	SNRNP48	98	71.512	Ictidomys_tridecemlineatus
ENSSHAG00000014483	SNRNP48	100	67.908	ENSJJAG00000011495	Snrnp48	99	67.908	Jaculus_jaculus
ENSSHAG00000014483	SNRNP48	93	44.308	ENSKMAG00000016514	snrnp48	82	46.980	Kryptolebias_marmoratus
ENSSHAG00000014483	SNRNP48	73	49.416	ENSLBEG00000026249	snrnp48	82	47.603	Labrus_bergylta
ENSSHAG00000014483	SNRNP48	98	55.780	ENSLACG00000003958	SNRNP48	86	55.629	Latimeria_chalumnae
ENSSHAG00000014483	SNRNP48	83	53.767	ENSLOCG00000004187	snrnp48	82	53.767	Lepisosteus_oculatus
ENSSHAG00000014483	SNRNP48	99	70.640	ENSLAFG00000011152	SNRNP48	98	70.640	Loxodonta_africana
ENSSHAG00000014483	SNRNP48	99	71.512	ENSMFAG00000045216	SNRNP48	98	71.512	Macaca_fascicularis
ENSSHAG00000014483	SNRNP48	99	71.512	ENSMMUG00000014785	SNRNP48	98	71.512	Macaca_mulatta
ENSSHAG00000014483	SNRNP48	99	71.512	ENSMNEG00000042269	SNRNP48	98	71.512	Macaca_nemestrina
ENSSHAG00000014483	SNRNP48	99	71.512	ENSMLEG00000034004	SNRNP48	98	71.512	Mandrillus_leucophaeus
ENSSHAG00000014483	SNRNP48	75	48.106	ENSMAMG00000018673	snrnp48	71	47.945	Mastacembelus_armatus
ENSSHAG00000014483	SNRNP48	83	70.103	ENSMGAG00000006037	SNRNP48	99	70.103	Meleagris_gallopavo
ENSSHAG00000014483	SNRNP48	99	70.058	ENSMAUG00000011944	Snrnp48	98	70.058	Mesocricetus_auratus
ENSSHAG00000014483	SNRNP48	99	70.349	ENSMICG00000012497	SNRNP48	98	70.349	Microcebus_murinus
ENSSHAG00000014483	SNRNP48	99	71.221	ENSMOCG00000015555	Snrnp48	98	71.221	Microtus_ochrogaster
ENSSHAG00000014483	SNRNP48	56	51.269	ENSMMOG00000003072	-	60	51.269	Mola_mola
ENSSHAG00000014483	SNRNP48	100	92.068	ENSMODG00000009996	SNRNP48	95	92.068	Monodelphis_domestica
ENSSHAG00000014483	SNRNP48	73	48.638	ENSMALG00000005725	snrnp48	83	46.622	Monopterus_albus
ENSSHAG00000014483	SNRNP48	100	70.201	MGP_CAROLIEiJ_G0018441	Snrnp48	99	70.201	Mus_caroli
ENSSHAG00000014483	SNRNP48	99	70.058	ENSMUSG00000021431	Snrnp48	98	70.058	Mus_musculus
ENSSHAG00000014483	SNRNP48	100	70.487	MGP_PahariEiJ_G0019509	Snrnp48	99	70.487	Mus_pahari
ENSSHAG00000014483	SNRNP48	100	69.628	MGP_SPRETEiJ_G0019321	Snrnp48	99	69.628	Mus_spretus
ENSSHAG00000014483	SNRNP48	100	69.628	ENSNGAG00000004849	Snrnp48	99	69.628	Nannospalax_galili
ENSSHAG00000014483	SNRNP48	74	48.092	ENSNBRG00000012127	snrnp48	83	47.157	Neolamprologus_brichardi
ENSSHAG00000014483	SNRNP48	99	71.221	ENSNLEG00000011667	SNRNP48	98	71.221	Nomascus_leucogenys
ENSSHAG00000014483	SNRNP48	96	64.371	ENSOPRG00000015471	SNRNP48	89	65.449	Ochotona_princeps
ENSSHAG00000014483	SNRNP48	94	44.578	ENSONIG00000001520	snrnp48	83	47.157	Oreochromis_niloticus
ENSSHAG00000014483	SNRNP48	56	65.385	ENSOANG00000019888	-	100	66.346	Ornithorhynchus_anatinus
ENSSHAG00000014483	SNRNP48	82	72.028	ENSOCUG00000005168	SNRNP48	94	71.477	Oryctolagus_cuniculus
ENSSHAG00000014483	SNRNP48	89	47.097	ENSORLG00000015654	snrnp48	82	47.635	Oryzias_latipes
ENSSHAG00000014483	SNRNP48	89	46.774	ENSORLG00020015976	snrnp48	70	47.297	Oryzias_latipes_hni
ENSSHAG00000014483	SNRNP48	89	47.419	ENSORLG00015022379	snrnp48	70	47.973	Oryzias_latipes_hsok
ENSSHAG00000014483	SNRNP48	83	48.966	ENSOMEG00000022007	snrnp48	82	48.649	Oryzias_melastigma
ENSSHAG00000014483	SNRNP48	92	69.688	ENSOGAG00000005275	SNRNP48	86	69.932	Otolemur_garnettii
ENSSHAG00000014483	SNRNP48	84	72.014	ENSOARG00000017319	SNRNP48	99	72.696	Ovis_aries
ENSSHAG00000014483	SNRNP48	99	71.221	ENSPPAG00000032873	SNRNP48	98	71.221	Pan_paniscus
ENSSHAG00000014483	SNRNP48	99	71.802	ENSPPRG00000004283	SNRNP48	98	71.802	Panthera_pardus
ENSSHAG00000014483	SNRNP48	84	73.720	ENSPTIG00000013502	SNRNP48	99	73.720	Panthera_tigris_altaica
ENSSHAG00000014483	SNRNP48	99	71.221	ENSPTRG00000017703	SNRNP48	98	71.221	Pan_troglodytes
ENSSHAG00000014483	SNRNP48	99	71.512	ENSPANG00000000771	SNRNP48	98	71.512	Papio_anubis
ENSSHAG00000014483	SNRNP48	99	45.983	ENSPKIG00000013703	snrnp48	58	50.704	Paramormyrops_kingsleyae
ENSSHAG00000014483	SNRNP48	85	69.231	ENSPSIG00000002213	SNRNP48	94	70.667	Pelodiscus_sinensis
ENSSHAG00000014483	SNRNP48	71	50.201	ENSPMGG00000008120	snrnp48	86	50.201	Periophthalmus_magnuspinnatus
ENSSHAG00000014483	SNRNP48	100	70.487	ENSPEMG00000008872	Snrnp48	99	68.451	Peromyscus_maniculatus_bairdii
ENSSHAG00000014483	SNRNP48	80	48.763	ENSPFOG00000003578	snrnp48	81	47.973	Poecilia_formosa
ENSSHAG00000014483	SNRNP48	68	48.945	ENSPLAG00000002290	snrnp48	79	48.945	Poecilia_latipinna
ENSSHAG00000014483	SNRNP48	80	48.410	ENSPMEG00000018033	snrnp48	81	47.635	Poecilia_mexicana
ENSSHAG00000014483	SNRNP48	72	49.606	ENSPREG00000018541	snrnp48	81	48.464	Poecilia_reticulata
ENSSHAG00000014483	SNRNP48	99	70.349	ENSPPYG00000016209	SNRNP48	98	70.349	Pongo_abelii
ENSSHAG00000014483	SNRNP48	77	58.052	ENSPCAG00000011991	SNRNP48	99	58.427	Procavia_capensis
ENSSHAG00000014483	SNRNP48	99	72.384	ENSPVAG00000002854	SNRNP48	98	72.384	Pteropus_vampyrus
ENSSHAG00000014483	SNRNP48	94	40.120	ENSPNYG00000015399	snrnp48	99	42.295	Pundamilia_nyererei
ENSSHAG00000014483	SNRNP48	100	70.201	ENSRNOG00000013756	Snrnp48	99	69.914	Rattus_norvegicus
ENSSHAG00000014483	SNRNP48	91	72.013	ENSRBIG00000043856	SNRNP48	90	72.148	Rhinopithecus_bieti
ENSSHAG00000014483	SNRNP48	99	71.221	ENSRROG00000043229	SNRNP48	98	71.221	Rhinopithecus_roxellana
ENSSHAG00000014483	SNRNP48	99	70.930	ENSSBOG00000019486	SNRNP48	98	70.930	Saimiri_boliviensis_boliviensis
ENSSHAG00000014483	SNRNP48	73	49.813	ENSSFOG00015006610	snrnp48	71	48.860	Scleropages_formosus
ENSSHAG00000014483	SNRNP48	89	45.625	ENSSDUG00000014953	snrnp48	84	46.512	Seriola_dumerili
ENSSHAG00000014483	SNRNP48	89	45.833	ENSSLDG00000005989	snrnp48	82	46.758	Seriola_lalandi_dorsalis
ENSSHAG00000014483	SNRNP48	85	74.582	ENSSPUG00000006257	SNRNP48	85	74.582	Sphenodon_punctatus
ENSSHAG00000014483	SNRNP48	81	47.018	ENSSPAG00000006454	snrnp48	82	46.735	Stegastes_partitus
ENSSHAG00000014483	SNRNP48	84	69.831	ENSTGUG00000007575	SNRNP48	94	69.831	Taeniopygia_guttata
ENSSHAG00000014483	SNRNP48	72	48.031	ENSTRUG00000007031	snrnp48	82	46.102	Takifugu_rubripes
ENSSHAG00000014483	SNRNP48	93	42.462	ENSTNIG00000012977	-	84	43.902	Tetraodon_nigroviridis
ENSSHAG00000014483	SNRNP48	76	73.106	ENSTBEG00000015620	SNRNP48	77	73.106	Tupaia_belangeri
ENSSHAG00000014483	SNRNP48	99	71.221	ENSTTRG00000016715	SNRNP48	98	71.221	Tursiops_truncatus
ENSSHAG00000014483	SNRNP48	99	71.512	ENSUAMG00000003690	SNRNP48	98	71.512	Ursus_americanus
ENSSHAG00000014483	SNRNP48	84	70.990	ENSVPAG00000003557	SNRNP48	99	70.990	Vicugna_pacos
ENSSHAG00000014483	SNRNP48	99	71.512	ENSVVUG00000004996	SNRNP48	97	71.512	Vulpes_vulpes
ENSSHAG00000014483	SNRNP48	88	57.655	ENSXETG00000020447	snrnp48	82	58.076	Xenopus_tropicalis
ENSSHAG00000014483	SNRNP48	68	49.580	ENSXCOG00000004478	snrnp48	71	49.580	Xiphophorus_couchianus
ENSSHAG00000014483	SNRNP48	80	48.763	ENSXMAG00000013595	snrnp48	81	47.973	Xiphophorus_maculatus