EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000014817 (Gene tree)
Gene ID: 100935294
Gene Symbol: -
Alias: -
Full Name: RNA polymerase II subunit D
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 12082 bases
Position: chrGL849596.1:1592148-1604229
Accession: 100935294
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000017438	RNA_pol_Rpb4	PF03874.16	2.5e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000017583	-	4101	-	ENSSHAP00000017438	142 (aa)	XP_003763803	G3WPT3

Gene Model

Click here to download ENSSHAG00000014817's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03020	RNA polymerase	KEGG
shr05016	Huntington disease	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000014817's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000014817	-	100	97.887	ENSG00000144231	POLR2D	100	99.038	Homo_sapiens
ENSSHAG00000014817	-	99	90.780	ENSAPOG00000023553	polr2d	98	90.780	Acanthochromis_polyacanthus
ENSSHAG00000014817	-	100	96.528	ENSAMEG00000011746	POLR2D	100	96.528	Ailuropoda_melanoleuca
ENSSHAG00000014817	-	99	90.780	ENSAOCG00000007295	polr2d	98	90.780	Amphiprion_ocellaris
ENSSHAG00000014817	-	99	90.780	ENSAPEG00000018714	polr2d	98	90.780	Amphiprion_percula
ENSSHAG00000014817	-	100	90.972	ENSATEG00000020416	polr2d	100	90.972	Anabas_testudineus
ENSSHAG00000014817	-	100	97.183	ENSACAG00000005255	POLR2D	100	97.183	Anolis_carolinensis
ENSSHAG00000014817	-	100	97.887	ENSANAG00000019959	POLR2D	100	97.887	Aotus_nancymaae
ENSSHAG00000014817	-	100	90.278	ENSACLG00000009919	polr2d	100	69.444	Astatotilapia_calliptera
ENSSHAG00000014817	-	94	95.489	ENSAMXG00000008954	polr2d	100	90.909	Astyanax_mexicanus
ENSSHAG00000014817	-	100	97.183	ENSBTAG00000053244	POLR2D	100	97.183	Bos_taurus
ENSSHAG00000014817	-	99	58.333	WBGene00018391	rpb-4	100	58.333	Caenorhabditis_elegans
ENSSHAG00000014817	-	100	97.183	ENSCJAG00000021814	-	100	97.183	Callithrix_jacchus
ENSSHAG00000014817	-	100	97.887	ENSCJAG00000042216	-	100	97.887	Callithrix_jacchus
ENSSHAG00000014817	-	100	97.887	ENSCAFG00000004311	POLR2D	100	97.887	Canis_familiaris
ENSSHAG00000014817	-	100	97.887	ENSCAFG00020003617	POLR2D	100	97.887	Canis_lupus_dingo
ENSSHAG00000014817	-	100	96.479	ENSCHIG00000025995	POLR2D	100	96.479	Capra_hircus
ENSSHAG00000014817	-	82	98.291	ENSTSYG00000036021	POLR2D	100	98.291	Carlito_syrichta
ENSSHAG00000014817	-	100	96.479	ENSCPOG00000002571	POLR2D	100	96.479	Cavia_porcellus
ENSSHAG00000014817	-	100	97.887	ENSCCAG00000037709	POLR2D	100	97.887	Cebus_capucinus
ENSSHAG00000014817	-	100	97.183	ENSCATG00000036749	POLR2D	100	97.183	Cercocebus_atys
ENSSHAG00000014817	-	100	97.183	ENSCLAG00000004449	POLR2D	100	97.183	Chinchilla_lanigera
ENSSHAG00000014817	-	100	97.183	ENSCSAG00000016861	POLR2D	100	97.183	Chlorocebus_sabaeus
ENSSHAG00000014817	-	82	99.145	ENSCHOG00000013850	POLR2D	100	99.145	Choloepus_hoffmanni
ENSSHAG00000014817	-	100	96.479	ENSCPBG00000019132	POLR2D	51	96.479	Chrysemys_picta_bellii
ENSSHAG00000014817	-	90	87.500	ENSCING00000011474	-	96	87.500	Ciona_intestinalis
ENSSHAG00000014817	-	90	87.500	ENSCSAVG00000008353	-	88	87.500	Ciona_savignyi
ENSSHAG00000014817	-	100	97.887	ENSCANG00000043665	POLR2D	100	97.887	Colobus_angolensis_palliatus
ENSSHAG00000014817	-	100	97.887	ENSCGRG00001013608	Polr2d	100	97.887	Cricetulus_griseus_chok1gshd
ENSSHAG00000014817	-	82	99.145	ENSCGRG00000012624	Polr2d	100	99.145	Cricetulus_griseus_crigri
ENSSHAG00000014817	-	100	91.667	ENSCSEG00000006147	polr2d	100	91.667	Cynoglossus_semilaevis
ENSSHAG00000014817	-	100	90.972	ENSCVAG00000000779	polr2d	100	90.972	Cyprinodon_variegatus
ENSSHAG00000014817	-	100	92.254	ENSDARG00000076509	polr2d	100	92.254	Danio_rerio
ENSSHAG00000014817	-	100	95.775	ENSDNOG00000008527	POLR2D	100	95.775	Dasypus_novemcinctus
ENSSHAG00000014817	-	100	97.183	ENSDORG00000026897	Polr2d	100	97.183	Dipodomys_ordii
ENSSHAG00000014817	-	92	78.462	FBgn0263757	Rpb4	94	78.462	Drosophila_melanogaster
ENSSHAG00000014817	-	100	92.254	ENSEBUG00000007675	polr2d	100	92.254	Eptatretus_burgeri
ENSSHAG00000014817	-	100	97.183	ENSEASG00005007103	POLR2D	100	97.183	Equus_asinus_asinus
ENSSHAG00000014817	-	100	97.887	ENSECAG00000000556	POLR2D	100	97.887	Equus_caballus
ENSSHAG00000014817	-	99	92.199	ENSELUG00000005928	polr2d	99	92.199	Esox_lucius
ENSSHAG00000014817	-	100	97.887	ENSFCAG00000027816	POLR2D	100	97.887	Felis_catus
ENSSHAG00000014817	-	100	98.592	ENSFALG00000003528	POLR2D	100	98.592	Ficedula_albicollis
ENSSHAG00000014817	-	100	96.479	ENSFDAG00000007217	POLR2D	100	96.479	Fukomys_damarensis
ENSSHAG00000014817	-	100	94.406	ENSGMOG00000001823	polr2d	99	94.406	Gadus_morhua
ENSSHAG00000014817	-	100	97.887	ENSGALG00000002057	POLR2D	100	97.887	Gallus_gallus
ENSSHAG00000014817	-	100	91.667	ENSGAFG00000016932	polr2d	71	91.667	Gambusia_affinis
ENSSHAG00000014817	-	100	90.278	ENSGACG00000004639	polr2d	100	90.278	Gasterosteus_aculeatus
ENSSHAG00000014817	-	100	96.479	ENSGAGG00000021308	POLR2D	100	96.479	Gopherus_agassizii
ENSSHAG00000014817	-	100	97.887	ENSGGOG00000004723	POLR2D	100	97.887	Gorilla_gorilla
ENSSHAG00000014817	-	100	97.183	ENSHGLG00000016570	Polr2d	100	97.183	Heterocephalus_glaber_female
ENSSHAG00000014817	-	100	97.183	ENSHGLG00100013785	Polr2d	100	97.183	Heterocephalus_glaber_male
ENSSHAG00000014817	-	100	89.437	ENSHCOG00000006425	polr2d	100	89.437	Hippocampus_comes
ENSSHAG00000014817	-	100	91.549	ENSIPUG00000011192	polr2d	100	91.549	Ictalurus_punctatus
ENSSHAG00000014817	-	100	95.775	ENSSTOG00000023329	POLR2D	100	95.775	Ictidomys_tridecemlineatus
ENSSHAG00000014817	-	100	87.324	ENSJJAG00000000783	-	100	87.324	Jaculus_jaculus
ENSSHAG00000014817	-	82	93.162	ENSJJAG00000005723	-	94	93.162	Jaculus_jaculus
ENSSHAG00000014817	-	100	96.479	ENSJJAG00000015053	-	100	96.479	Jaculus_jaculus
ENSSHAG00000014817	-	85	92.562	ENSKMAG00000010677	polr2d	68	92.562	Kryptolebias_marmoratus
ENSSHAG00000014817	-	100	95.775	ENSLACG00000017253	POLR2D	100	95.775	Latimeria_chalumnae
ENSSHAG00000014817	-	100	91.667	ENSLOCG00000009106	polr2d	100	91.667	Lepisosteus_oculatus
ENSSHAG00000014817	-	100	97.183	ENSLAFG00000001848	POLR2D	100	97.183	Loxodonta_africana
ENSSHAG00000014817	-	100	97.183	ENSMFAG00000031937	POLR2D	100	97.183	Macaca_fascicularis
ENSSHAG00000014817	-	100	97.183	ENSMMUG00000001989	POLR2D	100	97.183	Macaca_mulatta
ENSSHAG00000014817	-	100	97.183	ENSMNEG00000035505	POLR2D	100	97.183	Macaca_nemestrina
ENSSHAG00000014817	-	100	97.183	ENSMLEG00000035827	POLR2D	100	97.183	Mandrillus_leucophaeus
ENSSHAG00000014817	-	100	97.887	ENSMGAG00000001248	POLR2D	100	97.887	Meleagris_gallopavo
ENSSHAG00000014817	-	100	97.183	ENSMAUG00000014518	Polr2d	100	97.183	Mesocricetus_auratus
ENSSHAG00000014817	-	100	97.183	ENSMICG00000009931	POLR2D	100	97.183	Microcebus_murinus
ENSSHAG00000014817	-	100	95.070	ENSMOCG00000019367	Polr2d	100	95.070	Microtus_ochrogaster
ENSSHAG00000014817	-	100	82.394	ENSMODG00000025028	-	100	82.394	Monodelphis_domestica
ENSSHAG00000014817	-	100	81.690	ENSMODG00000025029	-	100	81.690	Monodelphis_domestica
ENSSHAG00000014817	-	100	82.394	ENSMODG00000025026	-	100	82.394	Monodelphis_domestica
ENSSHAG00000014817	-	100	82.394	ENSMODG00000025027	-	100	82.394	Monodelphis_domestica
ENSSHAG00000014817	-	100	81.690	ENSMODG00000025033	-	100	81.690	Monodelphis_domestica
ENSSHAG00000014817	-	100	80.986	ENSMODG00000025032	-	100	80.986	Monodelphis_domestica
ENSSHAG00000014817	-	100	81.690	ENSMODG00000025031	-	100	81.690	Monodelphis_domestica
ENSSHAG00000014817	-	100	82.394	ENSMODG00000025030	-	100	82.394	Monodelphis_domestica
ENSSHAG00000014817	-	100	81.690	ENSMODG00000025036	-	100	81.690	Monodelphis_domestica
ENSSHAG00000014817	-	100	81.690	ENSMODG00000025034	-	100	81.690	Monodelphis_domestica
ENSSHAG00000014817	-	100	81.690	ENSMODG00000025035	-	100	81.690	Monodelphis_domestica
ENSSHAG00000014817	-	100	99.296	ENSMODG00000018653	-	100	99.296	Monodelphis_domestica
ENSSHAG00000014817	-	100	90.972	ENSMALG00000018266	polr2d	100	90.972	Monopterus_albus
ENSSHAG00000014817	-	100	97.887	MGP_CAROLIEiJ_G0022066	Polr2d	100	97.887	Mus_caroli
ENSSHAG00000014817	-	100	97.887	ENSMUSG00000024258	Polr2d	100	97.887	Mus_musculus
ENSSHAG00000014817	-	100	97.887	MGP_PahariEiJ_G0018800	Polr2d	100	97.887	Mus_pahari
ENSSHAG00000014817	-	100	97.887	MGP_SPRETEiJ_G0022977	Polr2d	100	97.887	Mus_spretus
ENSSHAG00000014817	-	100	97.887	ENSMPUG00000016685	POLR2D	100	97.887	Mustela_putorius_furo
ENSSHAG00000014817	-	83	99.153	ENSMLUG00000006862	POLR2D	100	99.153	Myotis_lucifugus
ENSSHAG00000014817	-	100	97.887	ENSNGAG00000014862	Polr2d	100	97.887	Nannospalax_galili
ENSSHAG00000014817	-	100	97.887	ENSNLEG00000027191	POLR2D	100	97.887	Nomascus_leucogenys
ENSSHAG00000014817	-	82	98.291	ENSOPRG00000005327	POLR2D	100	98.291	Ochotona_princeps
ENSSHAG00000014817	-	100	97.183	ENSODEG00000005262	POLR2D	100	97.183	Octodon_degus
ENSSHAG00000014817	-	100	90.972	ENSONIG00000017290	polr2d	100	90.972	Oreochromis_niloticus
ENSSHAG00000014817	-	83	100.000	ENSOANG00000013216	POLR2D	100	100.000	Ornithorhynchus_anatinus
ENSSHAG00000014817	-	100	95.070	ENSOCUG00000023403	-	100	95.070	Oryctolagus_cuniculus
ENSSHAG00000014817	-	100	90.210	ENSOCUG00000021449	-	100	90.210	Oryctolagus_cuniculus
ENSSHAG00000014817	-	100	88.194	ENSORLG00000005266	polr2d	100	88.194	Oryzias_latipes
ENSSHAG00000014817	-	100	88.194	ENSORLG00020006647	polr2d	100	88.194	Oryzias_latipes_hni
ENSSHAG00000014817	-	100	88.194	ENSORLG00015003222	polr2d	100	88.194	Oryzias_latipes_hsok
ENSSHAG00000014817	-	100	88.889	ENSOMEG00000018915	polr2d	100	88.889	Oryzias_melastigma
ENSSHAG00000014817	-	100	95.833	ENSOGAG00000017118	POLR2D	100	95.833	Otolemur_garnettii
ENSSHAG00000014817	-	100	96.479	ENSOARG00000015995	POLR2D	100	96.479	Ovis_aries
ENSSHAG00000014817	-	100	97.887	ENSPPRG00000020222	POLR2D	100	97.887	Panthera_pardus
ENSSHAG00000014817	-	100	97.887	ENSPTIG00000018618	POLR2D	100	97.887	Panthera_tigris_altaica
ENSSHAG00000014817	-	100	97.887	ENSPTRG00000012436	POLR2D	100	97.887	Pan_troglodytes
ENSSHAG00000014817	-	100	97.183	ENSPANG00000018602	POLR2D	100	97.183	Papio_anubis
ENSSHAG00000014817	-	99	92.958	ENSPKIG00000012166	polr2d	99	92.958	Paramormyrops_kingsleyae
ENSSHAG00000014817	-	83	100.000	ENSPSIG00000002873	POLR2D	100	100.000	Pelodiscus_sinensis
ENSSHAG00000014817	-	100	97.887	ENSPEMG00000018244	Polr2d	100	97.887	Peromyscus_maniculatus_bairdii
ENSSHAG00000014817	-	100	89.437	ENSPMAG00000005021	polr2d	99	89.437	Petromyzon_marinus
ENSSHAG00000014817	-	100	91.667	ENSPFOG00000008969	polr2d	100	91.667	Poecilia_formosa
ENSSHAG00000014817	-	100	91.667	ENSPLAG00000017210	polr2d	100	91.667	Poecilia_latipinna
ENSSHAG00000014817	-	100	91.667	ENSPMEG00000005160	polr2d	100	91.667	Poecilia_mexicana
ENSSHAG00000014817	-	73	96.154	ENSPREG00000021862	polr2d	100	96.154	Poecilia_reticulata
ENSSHAG00000014817	-	100	97.887	ENSPPYG00000012759	POLR2D	100	97.887	Pongo_abelii
ENSSHAG00000014817	-	100	97.183	ENSPCAG00000001396	POLR2D	100	97.183	Procavia_capensis
ENSSHAG00000014817	-	100	97.183	ENSPCOG00000022076	POLR2D	100	97.183	Propithecus_coquereli
ENSSHAG00000014817	-	100	97.183	ENSPVAG00000004002	POLR2D	100	97.183	Pteropus_vampyrus
ENSSHAG00000014817	-	100	93.007	ENSPNAG00000018246	polr2d	100	93.007	Pygocentrus_nattereri
ENSSHAG00000014817	-	100	97.887	ENSRNOG00000016231	Polr2d	100	97.887	Rattus_norvegicus
ENSSHAG00000014817	-	100	97.887	ENSRBIG00000039326	POLR2D	100	97.887	Rhinopithecus_bieti
ENSSHAG00000014817	-	100	97.887	ENSRROG00000023289	POLR2D	100	97.887	Rhinopithecus_roxellana
ENSSHAG00000014817	-	92	96.947	ENSSFOG00015024204	polr2d	100	91.667	Scleropages_formosus
ENSSHAG00000014817	-	100	90.972	ENSSDUG00000006060	polr2d	100	90.972	Seriola_dumerili
ENSSHAG00000014817	-	95	94.074	ENSSLDG00000024485	polr2d	100	90.345	Seriola_lalandi_dorsalis
ENSSHAG00000014817	-	82	98.291	ENSSARG00000009037	POLR2D	100	98.291	Sorex_araneus
ENSSHAG00000014817	-	100	97.887	ENSSPUG00000014915	POLR2D	100	97.887	Sphenodon_punctatus
ENSSHAG00000014817	-	100	90.972	ENSSPAG00000013386	polr2d	100	90.972	Stegastes_partitus
ENSSHAG00000014817	-	100	97.887	ENSSSCG00000039230	POLR2D	100	97.887	Sus_scrofa
ENSSHAG00000014817	-	100	97.887	ENSTGUG00000005773	POLR2D	99	97.887	Taeniopygia_guttata
ENSSHAG00000014817	-	99	92.199	ENSTRUG00000004740	polr2d	99	92.199	Takifugu_rubripes
ENSSHAG00000014817	-	99	92.199	ENSTNIG00000011210	polr2d	99	92.199	Tetraodon_nigroviridis
ENSSHAG00000014817	-	82	99.145	ENSTBEG00000006081	POLR2D	100	99.145	Tupaia_belangeri
ENSSHAG00000014817	-	82	99.145	ENSTTRG00000010055	POLR2D	100	99.145	Tursiops_truncatus
ENSSHAG00000014817	-	92	97.692	ENSUAMG00000024374	POLR2D	98	97.692	Ursus_americanus
ENSSHAG00000014817	-	98	88.489	ENSUMAG00000008280	POLR2D	100	99.038	Ursus_maritimus
ENSSHAG00000014817	-	82	99.145	ENSVPAG00000007239	POLR2D	100	99.145	Vicugna_pacos
ENSSHAG00000014817	-	100	97.887	ENSVVUG00000008616	POLR2D	100	97.887	Vulpes_vulpes
ENSSHAG00000014817	-	100	90.845	ENSXETG00000002955	polr2d	100	90.845	Xenopus_tropicalis
ENSSHAG00000014817	-	73	96.154	ENSXCOG00000012668	polr2d	100	96.154	Xiphophorus_couchianus
ENSSHAG00000014817	-	73	96.154	ENSXMAG00000014031	polr2d	100	96.154	Xiphophorus_maculatus