EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000014829 (Gene tree)
Gene ID: 100914787
Gene Symbol: THOC1
Alias: HPR1|P84
Full Name: THO complex 1
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 50451 bases
Position: chrGL841304.1:1594488-1644938
Accession: 100914787
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000017453	efThoc1	PF11957.8	3.8e-146	1	1
ENSSHAP00000017452	efThoc1	PF11957.8	1.2e-130	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000017598	THOC1-202	1977	-	ENSSHAP00000017453	658 (aa)	XP_003760061	G3WPU8
ENSSHAT00000017597	THOC1-201	1980	-	ENSSHAP00000017452	659 (aa)	-	G3WPU7

Gene Model

Click here to download ENSSHAG00000014829's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03013	RNA transport	KEGG
shr03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000014829's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000014829	THOC1	100	94.681	ENSG00000079134	THOC1	100	94.681	Homo_sapiens
ENSSHAG00000014829	THOC1	100	94.985	ENSAMEG00000006645	THOC1	99	94.985	Ailuropoda_melanoleuca
ENSSHAG00000014829	THOC1	93	73.693	ENSACIG00000019392	thoc1	99	68.875	Amphilophus_citrinellus
ENSSHAG00000014829	THOC1	98	69.692	ENSAOCG00000008391	thoc1	99	69.692	Amphiprion_ocellaris
ENSSHAG00000014829	THOC1	98	73.160	ENSAPEG00000001093	thoc1	99	73.160	Amphiprion_percula
ENSSHAG00000014829	THOC1	98	73.118	ENSATEG00000004783	thoc1	99	73.118	Anabas_testudineus
ENSSHAG00000014829	THOC1	98	91.204	ENSAPLG00000016149	THOC1	98	91.204	Anas_platyrhynchos
ENSSHAG00000014829	THOC1	100	89.697	ENSACAG00000008307	THOC1	98	89.545	Anolis_carolinensis
ENSSHAG00000014829	THOC1	100	93.383	ENSANAG00000033200	THOC1	100	93.383	Aotus_nancymaae
ENSSHAG00000014829	THOC1	98	72.853	ENSACLG00000016836	thoc1	99	72.853	Astatotilapia_calliptera
ENSSHAG00000014829	THOC1	93	72.000	ENSAMXG00000014708	thoc1	97	71.680	Astyanax_mexicanus
ENSSHAG00000014829	THOC1	100	94.377	ENSBTAG00000019215	THOC1	100	94.377	Bos_taurus
ENSSHAG00000014829	THOC1	71	35.208	WBGene00020172	thoc-1	69	35.897	Caenorhabditis_elegans
ENSSHAG00000014829	THOC1	100	94.377	ENSCJAG00000020450	THOC1	100	94.377	Callithrix_jacchus
ENSSHAG00000014829	THOC1	100	94.833	ENSCAFG00000018324	THOC1	100	94.833	Canis_familiaris
ENSSHAG00000014829	THOC1	100	94.833	ENSCAFG00020017894	THOC1	100	94.833	Canis_lupus_dingo
ENSSHAG00000014829	THOC1	100	94.377	ENSCHIG00000015399	THOC1	100	94.377	Capra_hircus
ENSSHAG00000014829	THOC1	100	94.833	ENSTSYG00000010585	THOC1	99	94.833	Carlito_syrichta
ENSSHAG00000014829	THOC1	88	82.427	ENSCAPG00000016270	THOC1	98	82.427	Cavia_aperea
ENSSHAG00000014829	THOC1	100	93.313	ENSCPOG00000000959	THOC1	100	93.313	Cavia_porcellus
ENSSHAG00000014829	THOC1	100	94.529	ENSCCAG00000025766	THOC1	100	94.529	Cebus_capucinus
ENSSHAG00000014829	THOC1	100	91.185	ENSCATG00000028180	THOC1	99	93.521	Cercocebus_atys
ENSSHAG00000014829	THOC1	97	94.679	ENSCLAG00000009117	THOC1	99	94.679	Chinchilla_lanigera
ENSSHAG00000014829	THOC1	100	94.681	ENSCSAG00000017631	THOC1	100	94.681	Chlorocebus_sabaeus
ENSSHAG00000014829	THOC1	89	84.588	ENSCHOG00000010609	THOC1	89	84.588	Choloepus_hoffmanni
ENSSHAG00000014829	THOC1	99	94.962	ENSCPBG00000027558	THOC1	99	94.962	Chrysemys_picta_bellii
ENSSHAG00000014829	THOC1	74	48.606	ENSCING00000007663	-	100	47.904	Ciona_intestinalis
ENSSHAG00000014829	THOC1	93	47.377	ENSCSAVG00000010649	-	99	46.975	Ciona_savignyi
ENSSHAG00000014829	THOC1	100	94.529	ENSCANG00000034265	THOC1	100	94.529	Colobus_angolensis_palliatus
ENSSHAG00000014829	THOC1	100	93.313	ENSCGRG00001016464	Thoc1	99	93.313	Cricetulus_griseus_chok1gshd
ENSSHAG00000014829	THOC1	98	93.034	ENSCGRG00000010269	-	99	93.584	Cricetulus_griseus_crigri
ENSSHAG00000014829	THOC1	90	77.365	ENSCGRG00000003390	-	99	77.365	Cricetulus_griseus_crigri
ENSSHAG00000014829	THOC1	98	71.385	ENSCSEG00000012486	thoc1	99	72.990	Cynoglossus_semilaevis
ENSSHAG00000014829	THOC1	98	72.086	ENSCVAG00000020600	thoc1	99	72.086	Cyprinodon_variegatus
ENSSHAG00000014829	THOC1	99	74.351	ENSDARG00000088246	thoc1	99	74.351	Danio_rerio
ENSSHAG00000014829	THOC1	100	95.137	ENSDNOG00000019217	THOC1	100	95.137	Dasypus_novemcinctus
ENSSHAG00000014829	THOC1	99	87.424	ENSDORG00000008060	Thoc1	99	89.358	Dipodomys_ordii
ENSSHAG00000014829	THOC1	97	34.290	FBgn0037382	Hpr1	74	41.591	Drosophila_melanogaster
ENSSHAG00000014829	THOC1	91	73.032	ENSETEG00000004165	THOC1	100	73.032	Echinops_telfairi
ENSSHAG00000014829	THOC1	92	65.124	ENSEBUG00000005998	thoc1	98	66.446	Eptatretus_burgeri
ENSSHAG00000014829	THOC1	100	94.833	ENSEASG00005002549	THOC1	96	94.833	Equus_asinus_asinus
ENSSHAG00000014829	THOC1	100	95.137	ENSECAG00000009267	THOC1	90	95.137	Equus_caballus
ENSSHAG00000014829	THOC1	79	77.114	ENSEEUG00000012214	-	82	77.114	Erinaceus_europaeus
ENSSHAG00000014829	THOC1	99	73.933	ENSELUG00000023277	thoc1	99	73.933	Esox_lucius
ENSSHAG00000014829	THOC1	100	94.681	ENSFCAG00000022454	THOC1	87	94.681	Felis_catus
ENSSHAG00000014829	THOC1	97	91.446	ENSFALG00000006205	THOC1	99	91.446	Ficedula_albicollis
ENSSHAG00000014829	THOC1	98	94.599	ENSFDAG00000006842	THOC1	100	94.599	Fukomys_damarensis
ENSSHAG00000014829	THOC1	98	71.779	ENSFHEG00000008841	thoc1	99	71.779	Fundulus_heteroclitus
ENSSHAG00000014829	THOC1	98	72.419	ENSGMOG00000011486	thoc1	99	72.419	Gadus_morhua
ENSSHAG00000014829	THOC1	99	91.603	ENSGALG00000014915	THOC1	98	91.603	Gallus_gallus
ENSSHAG00000014829	THOC1	98	72.086	ENSGAFG00000021464	thoc1	99	72.086	Gambusia_affinis
ENSSHAG00000014829	THOC1	98	72.573	ENSGACG00000017361	thoc1	99	72.504	Gasterosteus_aculeatus
ENSSHAG00000014829	THOC1	99	94.656	ENSGAGG00000021230	-	98	94.656	Gopherus_agassizii
ENSSHAG00000014829	THOC1	100	94.681	ENSGGOG00000003013	THOC1	99	94.681	Gorilla_gorilla
ENSSHAG00000014829	THOC1	98	72.853	ENSHBUG00000009096	thoc1	99	72.853	Haplochromis_burtoni
ENSSHAG00000014829	THOC1	78	86.082	ENSHGLG00000009264	-	99	86.082	Heterocephalus_glaber_female
ENSSHAG00000014829	THOC1	100	93.313	ENSHGLG00000003712	-	100	93.313	Heterocephalus_glaber_female
ENSSHAG00000014829	THOC1	77	84.536	ENSHGLG00100002225	-	99	84.536	Heterocephalus_glaber_male
ENSSHAG00000014829	THOC1	100	93.465	ENSHGLG00100003570	THOC1	100	93.465	Heterocephalus_glaber_male
ENSSHAG00000014829	THOC1	88	74.053	ENSIPUG00000005306	thoc1	99	73.295	Ictalurus_punctatus
ENSSHAG00000014829	THOC1	100	94.681	ENSSTOG00000006484	THOC1	100	94.681	Ictidomys_tridecemlineatus
ENSSHAG00000014829	THOC1	52	91.471	ENSJJAG00000014893	-	96	91.471	Jaculus_jaculus
ENSSHAG00000014829	THOC1	98	70.968	ENSKMAG00000003904	thoc1	99	70.968	Kryptolebias_marmoratus
ENSSHAG00000014829	THOC1	98	72.699	ENSLBEG00000020372	thoc1	98	72.699	Labrus_bergylta
ENSSHAG00000014829	THOC1	99	81.707	ENSLACG00000014869	THOC1	99	81.402	Latimeria_chalumnae
ENSSHAG00000014829	THOC1	98	77.795	ENSLOCG00000002097	thoc1	99	77.642	Lepisosteus_oculatus
ENSSHAG00000014829	THOC1	100	94.833	ENSLAFG00000009585	THOC1	100	94.833	Loxodonta_africana
ENSSHAG00000014829	THOC1	100	94.681	ENSMFAG00000041520	THOC1	99	94.681	Macaca_fascicularis
ENSSHAG00000014829	THOC1	100	94.681	ENSMMUG00000004662	THOC1	100	94.681	Macaca_mulatta
ENSSHAG00000014829	THOC1	100	94.681	ENSMNEG00000040177	THOC1	99	94.681	Macaca_nemestrina
ENSSHAG00000014829	THOC1	100	94.681	ENSMLEG00000034201	THOC1	99	94.681	Mandrillus_leucophaeus
ENSSHAG00000014829	THOC1	94	73.355	ENSMAMG00000016747	thoc1	99	73.355	Mastacembelus_armatus
ENSSHAG00000014829	THOC1	98	72.853	ENSMZEG00005024609	thoc1	99	72.853	Maylandia_zebra
ENSSHAG00000014829	THOC1	97	91.121	ENSMGAG00000009811	THOC1	100	91.121	Meleagris_gallopavo
ENSSHAG00000014829	THOC1	100	93.161	ENSMAUG00000010272	Thoc1	99	93.161	Mesocricetus_auratus
ENSSHAG00000014829	THOC1	100	94.833	ENSMICG00000027200	THOC1	100	94.833	Microcebus_murinus
ENSSHAG00000014829	THOC1	99	92.237	ENSMOCG00000014536	-	86	92.237	Microtus_ochrogaster
ENSSHAG00000014829	THOC1	99	81.402	ENSMOCG00000014924	-	96	80.793	Microtus_ochrogaster
ENSSHAG00000014829	THOC1	92	72.757	ENSMMOG00000011772	thoc1	100	72.757	Mola_mola
ENSSHAG00000014829	THOC1	100	98.496	ENSMODG00000021482	THOC1	100	98.496	Monodelphis_domestica
ENSSHAG00000014829	THOC1	98	73.425	ENSMALG00000021872	thoc1	99	73.425	Monopterus_albus
ENSSHAG00000014829	THOC1	100	93.465	MGP_CAROLIEiJ_G0021989	Thoc1	100	93.465	Mus_caroli
ENSSHAG00000014829	THOC1	100	93.617	ENSMUSG00000024287	Thoc1	100	94.326	Mus_musculus
ENSSHAG00000014829	THOC1	100	93.617	MGP_PahariEiJ_G0018726	Thoc1	100	93.617	Mus_pahari
ENSSHAG00000014829	THOC1	100	93.465	MGP_SPRETEiJ_G0022905	Thoc1	100	93.465	Mus_spretus
ENSSHAG00000014829	THOC1	100	94.985	ENSMPUG00000005448	THOC1	100	94.985	Mustela_putorius_furo
ENSSHAG00000014829	THOC1	60	81.612	ENSMLUG00000024912	-	100	81.612	Myotis_lucifugus
ENSSHAG00000014829	THOC1	100	94.385	ENSMLUG00000004090	-	100	94.385	Myotis_lucifugus
ENSSHAG00000014829	THOC1	90	81.697	ENSMLUG00000027965	-	99	81.987	Myotis_lucifugus
ENSSHAG00000014829	THOC1	100	94.377	ENSNGAG00000001401	-	100	94.377	Nannospalax_galili
ENSSHAG00000014829	THOC1	99	73.385	ENSNGAG00000008061	-	99	73.385	Nannospalax_galili
ENSSHAG00000014829	THOC1	97	72.770	ENSNBRG00000005991	thoc1	98	72.770	Neolamprologus_brichardi
ENSSHAG00000014829	THOC1	100	94.681	ENSNLEG00000006835	THOC1	100	94.681	Nomascus_leucogenys
ENSSHAG00000014829	THOC1	97	85.000	ENSMEUG00000009756	THOC1	100	85.000	Notamacropus_eugenii
ENSSHAG00000014829	THOC1	100	75.836	ENSOPRG00000001108	THOC1	100	75.836	Ochotona_princeps
ENSSHAG00000014829	THOC1	100	87.994	ENSODEG00000006623	THOC1	100	87.994	Octodon_degus
ENSSHAG00000014829	THOC1	98	73.118	ENSONIG00000009440	thoc1	98	73.118	Oreochromis_niloticus
ENSSHAG00000014829	THOC1	100	95.289	ENSOCUG00000011601	THOC1	100	95.289	Oryctolagus_cuniculus
ENSSHAG00000014829	THOC1	98	72.239	ENSORLG00000017629	thoc1	99	72.239	Oryzias_latipes
ENSSHAG00000014829	THOC1	98	72.239	ENSORLG00020007567	thoc1	99	72.239	Oryzias_latipes_hni
ENSSHAG00000014829	THOC1	98	72.393	ENSORLG00015007356	thoc1	99	72.393	Oryzias_latipes_hsok
ENSSHAG00000014829	THOC1	98	71.012	ENSOMEG00000008200	thoc1	99	71.012	Oryzias_melastigma
ENSSHAG00000014829	THOC1	100	91.185	ENSOGAG00000000470	THOC1	99	91.185	Otolemur_garnettii
ENSSHAG00000014829	THOC1	99	92.846	ENSOARG00000009238	THOC1	99	92.846	Ovis_aries
ENSSHAG00000014829	THOC1	100	94.833	ENSPPAG00000031812	THOC1	99	94.833	Pan_paniscus
ENSSHAG00000014829	THOC1	100	94.377	ENSPPRG00000023794	THOC1	100	94.377	Panthera_pardus
ENSSHAG00000014829	THOC1	100	94.377	ENSPTIG00000007469	THOC1	100	94.377	Panthera_tigris_altaica
ENSSHAG00000014829	THOC1	100	93.835	ENSPTRG00000009816	THOC1	100	93.835	Pan_troglodytes
ENSSHAG00000014829	THOC1	100	93.656	ENSPANG00000008665	THOC1	100	93.656	Papio_anubis
ENSSHAG00000014829	THOC1	99	72.783	ENSPKIG00000005906	thoc1	99	73.547	Paramormyrops_kingsleyae
ENSSHAG00000014829	THOC1	81	96.435	ENSPSIG00000007691	THOC1	98	96.435	Pelodiscus_sinensis
ENSSHAG00000014829	THOC1	93	73.258	ENSPMGG00000008279	thoc1	95	73.258	Periophthalmus_magnuspinnatus
ENSSHAG00000014829	THOC1	100	93.465	ENSPEMG00000021789	Thoc1	100	93.465	Peromyscus_maniculatus_bairdii
ENSSHAG00000014829	THOC1	74	97.773	ENSPCIG00000026942	THOC1	98	97.773	Phascolarctos_cinereus
ENSSHAG00000014829	THOC1	98	72.197	ENSPFOG00000011673	thoc1	99	72.197	Poecilia_formosa
ENSSHAG00000014829	THOC1	98	72.086	ENSPLAG00000019648	thoc1	99	72.086	Poecilia_latipinna
ENSSHAG00000014829	THOC1	98	72.197	ENSPMEG00000007083	thoc1	99	72.197	Poecilia_mexicana
ENSSHAG00000014829	THOC1	98	71.933	ENSPREG00000006719	thoc1	99	71.933	Poecilia_reticulata
ENSSHAG00000014829	THOC1	74	95.277	ENSPPYG00000009049	-	99	95.277	Pongo_abelii
ENSSHAG00000014829	THOC1	100	84.954	ENSPCAG00000005320	THOC1	100	83.891	Procavia_capensis
ENSSHAG00000014829	THOC1	100	94.529	ENSPCOG00000009234	THOC1	100	94.529	Propithecus_coquereli
ENSSHAG00000014829	THOC1	100	92.705	ENSPVAG00000004007	THOC1	100	92.705	Pteropus_vampyrus
ENSSHAG00000014829	THOC1	98	72.853	ENSPNYG00000019152	thoc1	99	72.853	Pundamilia_nyererei
ENSSHAG00000014829	THOC1	98	74.962	ENSPNAG00000023390	thoc1	99	74.808	Pygocentrus_nattereri
ENSSHAG00000014829	THOC1	91	83.984	ENSRNOG00000015332	Thoc1	100	83.984	Rattus_norvegicus
ENSSHAG00000014829	THOC1	100	93.684	ENSRBIG00000033738	THOC1	99	95.312	Rhinopithecus_bieti
ENSSHAG00000014829	THOC1	100	94.681	ENSRROG00000044988	THOC1	100	94.681	Rhinopithecus_roxellana
ENSSHAG00000014829	THOC1	100	94.377	ENSSBOG00000016556	THOC1	99	94.377	Saimiri_boliviensis_boliviensis
ENSSHAG00000014829	THOC1	98	75.307	ENSSFOG00015021527	thoc1	99	75.307	Scleropages_formosus
ENSSHAG00000014829	THOC1	98	71.429	ENSSMAG00000018465	thoc1	99	71.429	Scophthalmus_maximus
ENSSHAG00000014829	THOC1	98	73.579	ENSSDUG00000016810	thoc1	99	73.579	Seriola_dumerili
ENSSHAG00000014829	THOC1	98	73.272	ENSSLDG00000015555	thoc1	99	73.272	Seriola_lalandi_dorsalis
ENSSHAG00000014829	THOC1	88	92.337	ENSSARG00000006910	THOC1	88	92.337	Sorex_araneus
ENSSHAG00000014829	THOC1	98	92.081	ENSSPUG00000007238	THOC1	99	92.061	Sphenodon_punctatus
ENSSHAG00000014829	THOC1	98	70.183	ENSSPAG00000018847	thoc1	99	70.183	Stegastes_partitus
ENSSHAG00000014829	THOC1	100	95.441	ENSSSCG00000025653	THOC1	94	95.441	Sus_scrofa
ENSSHAG00000014829	THOC1	99	92.061	ENSTGUG00000010204	THOC1	99	92.061	Taeniopygia_guttata
ENSSHAG00000014829	THOC1	98	71.779	ENSTRUG00000013518	thoc1	99	71.779	Takifugu_rubripes
ENSSHAG00000014829	THOC1	98	72.086	ENSTNIG00000008473	thoc1	99	72.086	Tetraodon_nigroviridis
ENSSHAG00000014829	THOC1	100	87.538	ENSTBEG00000016920	THOC1	100	87.538	Tupaia_belangeri
ENSSHAG00000014829	THOC1	100	87.994	ENSTTRG00000016664	THOC1	100	87.994	Tursiops_truncatus
ENSSHAG00000014829	THOC1	100	95.137	ENSUAMG00000002527	THOC1	100	95.137	Ursus_americanus
ENSSHAG00000014829	THOC1	100	95.137	ENSUMAG00000019693	THOC1	100	95.137	Ursus_maritimus
ENSSHAG00000014829	THOC1	77	94.030	ENSVPAG00000003726	-	77	94.030	Vicugna_pacos
ENSSHAG00000014829	THOC1	100	94.833	ENSVVUG00000004384	THOC1	100	94.833	Vulpes_vulpes
ENSSHAG00000014829	THOC1	99	79.848	ENSXETG00000003155	thoc1	98	79.848	Xenopus_tropicalis
ENSSHAG00000014829	THOC1	93	70.425	ENSXCOG00000016085	thoc1	89	70.425	Xiphophorus_couchianus
ENSSHAG00000014829	THOC1	98	71.933	ENSXMAG00000002353	thoc1	99	71.933	Xiphophorus_maculatus