EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000014914 (Gene tree)
Gene ID: 100929928
Gene Symbol: LSM12
Alias: FLJ30656
Full Name: LSM12 homolog
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 25071 bases
Position: chrGL856829.1:1626448-1651518
Accession: 26407
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000017557	AD	PF09793.9	1.1e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000017702	LSM12-201	477	-	ENSSHAP00000017557	158 (aa)	-	G3WQ52

Gene Model

Click here to download ENSSHAG00000014914's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000014914's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000014914	LSM12	100	94.304	ENSG00000161654	LSM12	81	94.304	Homo_sapiens
ENSSHAG00000014914	LSM12	100	84.810	ENSAPOG00000007907	lsm12b	81	84.810	Acanthochromis_polyacanthus
ENSSHAG00000014914	LSM12	97	96.104	ENSAMEG00000018321	LSM12	78	96.104	Ailuropoda_melanoleuca
ENSSHAG00000014914	LSM12	100	84.177	ENSACIG00000008538	lsm12b	81	84.177	Amphilophus_citrinellus
ENSSHAG00000014914	LSM12	100	84.177	ENSAOCG00000021847	lsm12b	71	84.177	Amphiprion_ocellaris
ENSSHAG00000014914	LSM12	100	84.177	ENSAPEG00000002252	lsm12b	81	84.177	Amphiprion_percula
ENSSHAG00000014914	LSM12	100	83.544	ENSATEG00000005705	lsm12b	81	83.544	Anabas_testudineus
ENSSHAG00000014914	LSM12	100	93.038	ENSACAG00000004618	LSM12	81	93.038	Anolis_carolinensis
ENSSHAG00000014914	LSM12	100	94.304	ENSANAG00000029011	LSM12	81	94.595	Aotus_nancymaae
ENSSHAG00000014914	LSM12	100	83.544	ENSACLG00000026332	lsm12b	81	83.544	Astatotilapia_calliptera
ENSSHAG00000014914	LSM12	100	83.544	ENSAMXG00000032952	lsm12b	81	83.544	Astyanax_mexicanus
ENSSHAG00000014914	LSM12	100	77.848	ENSAMXG00000036117	lsm12a	73	77.848	Astyanax_mexicanus
ENSSHAG00000014914	LSM12	100	94.304	ENSBTAG00000016252	LSM12	81	94.304	Bos_taurus
ENSSHAG00000014914	LSM12	100	94.304	ENSCJAG00000048480	LSM12	81	94.595	Callithrix_jacchus
ENSSHAG00000014914	LSM12	100	94.304	ENSCAFG00000014379	LSM12	74	94.304	Canis_familiaris
ENSSHAG00000014914	LSM12	100	94.304	ENSCAFG00020012173	LSM12	81	94.304	Canis_lupus_dingo
ENSSHAG00000014914	LSM12	100	94.304	ENSCHIG00000018175	LSM12	81	94.304	Capra_hircus
ENSSHAG00000014914	LSM12	100	94.304	ENSTSYG00000036361	LSM12	81	94.304	Carlito_syrichta
ENSSHAG00000014914	LSM12	97	96.104	ENSCAPG00000009647	LSM12	84	96.104	Cavia_aperea
ENSSHAG00000014914	LSM12	100	94.304	ENSCPOG00000012860	LSM12	81	94.595	Cavia_porcellus
ENSSHAG00000014914	LSM12	100	94.304	ENSCCAG00000032905	LSM12	81	94.595	Cebus_capucinus
ENSSHAG00000014914	LSM12	100	94.304	ENSCATG00000030577	-	81	94.595	Cercocebus_atys
ENSSHAG00000014914	LSM12	100	94.304	ENSCLAG00000015759	LSM12	81	94.595	Chinchilla_lanigera
ENSSHAG00000014914	LSM12	100	93.671	ENSCSAG00000003486	LSM12	81	93.671	Chlorocebus_sabaeus
ENSSHAG00000014914	LSM12	69	95.413	ENSCHOG00000001198	LSM12	100	95.413	Choloepus_hoffmanni
ENSSHAG00000014914	LSM12	100	92.405	ENSCPBG00000027105	LSM12	81	92.405	Chrysemys_picta_bellii
ENSSHAG00000014914	LSM12	100	94.304	ENSCANG00000043328	LSM12	81	94.595	Colobus_angolensis_palliatus
ENSSHAG00000014914	LSM12	100	94.304	ENSCGRG00001002094	Lsm12	81	94.595	Cricetulus_griseus_chok1gshd
ENSSHAG00000014914	LSM12	97	96.078	ENSCGRG00000004316	Lsm12	86	96.078	Cricetulus_griseus_crigri
ENSSHAG00000014914	LSM12	100	82.911	ENSCSEG00000008434	lsm12b	81	82.911	Cynoglossus_semilaevis
ENSSHAG00000014914	LSM12	100	83.544	ENSCVAG00000008755	lsm12b	81	83.544	Cyprinodon_variegatus
ENSSHAG00000014914	LSM12	100	84.177	ENSDARG00000109510	lsm12b	81	84.177	Danio_rerio
ENSSHAG00000014914	LSM12	100	72.785	ENSDARG00000028848	lsm12a	81	72.785	Danio_rerio
ENSSHAG00000014914	LSM12	100	94.937	ENSDNOG00000002418	LSM12	74	94.937	Dasypus_novemcinctus
ENSSHAG00000014914	LSM12	100	94.304	ENSDORG00000016381	Lsm12	81	94.595	Dipodomys_ordii
ENSSHAG00000014914	LSM12	100	82.911	ENSETEG00000011012	-	90	82.911	Echinops_telfairi
ENSSHAG00000014914	LSM12	100	93.671	ENSETEG00000008374	LSM12	81	93.671	Echinops_telfairi
ENSSHAG00000014914	LSM12	82	60.465	ENSEBUG00000016299	lsm12a	72	60.465	Eptatretus_burgeri
ENSSHAG00000014914	LSM12	100	94.304	ENSEASG00005010155	LSM12	81	94.304	Equus_asinus_asinus
ENSSHAG00000014914	LSM12	100	94.304	ENSECAG00000009071	LSM12	81	94.595	Equus_caballus
ENSSHAG00000014914	LSM12	97	96.078	ENSEEUG00000002419	-	100	96.078	Erinaceus_europaeus
ENSSHAG00000014914	LSM12	100	80.380	ENSELUG00000000256	-	81	80.380	Esox_lucius
ENSSHAG00000014914	LSM12	100	81.646	ENSELUG00000015538	lsm12b	80	75.949	Esox_lucius
ENSSHAG00000014914	LSM12	100	94.304	ENSFCAG00000037021	LSM12	81	94.304	Felis_catus
ENSSHAG00000014914	LSM12	94	95.946	ENSFDAG00000008954	LSM12	87	95.946	Fukomys_damarensis
ENSSHAG00000014914	LSM12	100	82.278	ENSFHEG00000019913	lsm12b	81	82.278	Fundulus_heteroclitus
ENSSHAG00000014914	LSM12	100	82.911	ENSGMOG00000015449	lsm12b	100	82.911	Gadus_morhua
ENSSHAG00000014914	LSM12	97	95.425	ENSGALG00000039803	LSM12	100	95.425	Gallus_gallus
ENSSHAG00000014914	LSM12	100	82.911	ENSGAFG00000011829	lsm12b	81	82.911	Gambusia_affinis
ENSSHAG00000014914	LSM12	100	83.544	ENSGACG00000003428	lsm12b	100	83.544	Gasterosteus_aculeatus
ENSSHAG00000014914	LSM12	100	93.671	ENSGAGG00000021965	LSM12	81	93.671	Gopherus_agassizii
ENSSHAG00000014914	LSM12	100	94.304	ENSGGOG00000010589	-	81	94.595	Gorilla_gorilla
ENSSHAG00000014914	LSM12	99	84.615	ENSHBUG00000007667	lsm12b	69	84.615	Haplochromis_burtoni
ENSSHAG00000014914	LSM12	100	94.304	ENSHGLG00000011411	LSM12	81	94.595	Heterocephalus_glaber_female
ENSSHAG00000014914	LSM12	100	94.304	ENSHGLG00100000241	LSM12	84	94.304	Heterocephalus_glaber_male
ENSSHAG00000014914	LSM12	100	82.278	ENSHCOG00000002094	lsm12b	81	82.278	Hippocampus_comes
ENSSHAG00000014914	LSM12	100	84.177	ENSIPUG00000014800	lsm12	81	84.177	Ictalurus_punctatus
ENSSHAG00000014914	LSM12	99	72.436	ENSIPUG00000008936	lsm12a	79	72.436	Ictalurus_punctatus
ENSSHAG00000014914	LSM12	100	94.304	ENSSTOG00000007403	LSM12	81	94.595	Ictidomys_tridecemlineatus
ENSSHAG00000014914	LSM12	100	83.019	ENSJJAG00000011793	-	83	83.019	Jaculus_jaculus
ENSSHAG00000014914	LSM12	100	93.038	ENSJJAG00000004364	-	81	93.694	Jaculus_jaculus
ENSSHAG00000014914	LSM12	81	82.812	ENSJJAG00000014652	-	75	82.812	Jaculus_jaculus
ENSSHAG00000014914	LSM12	100	84.177	ENSLBEG00000027999	lsm12b	81	84.177	Labrus_bergylta
ENSSHAG00000014914	LSM12	100	89.873	ENSLACG00000015981	LSM12	81	89.873	Latimeria_chalumnae
ENSSHAG00000014914	LSM12	100	82.911	ENSLOCG00000013079	lsm12b	80	82.911	Lepisosteus_oculatus
ENSSHAG00000014914	LSM12	100	94.304	ENSLAFG00000005202	LSM12	81	94.304	Loxodonta_africana
ENSSHAG00000014914	LSM12	100	94.304	ENSMFAG00000031376	LSM12	81	94.595	Macaca_fascicularis
ENSSHAG00000014914	LSM12	55	81.609	ENSMMUG00000042106	-	79	81.609	Macaca_mulatta
ENSSHAG00000014914	LSM12	55	81.609	ENSMMUG00000038408	-	79	81.609	Macaca_mulatta
ENSSHAG00000014914	LSM12	100	94.304	ENSMMUG00000006804	LSM12	81	94.595	Macaca_mulatta
ENSSHAG00000014914	LSM12	100	94.304	ENSMNEG00000030594	-	81	94.595	Macaca_nemestrina
ENSSHAG00000014914	LSM12	100	94.304	ENSMLEG00000039934	LSM12	81	94.595	Mandrillus_leucophaeus
ENSSHAG00000014914	LSM12	100	83.544	ENSMAMG00000004279	lsm12b	81	83.544	Mastacembelus_armatus
ENSSHAG00000014914	LSM12	100	83.544	ENSMZEG00005005754	lsm12b	81	83.544	Maylandia_zebra
ENSSHAG00000014914	LSM12	100	93.671	ENSMICG00000037219	LSM12	81	93.694	Microcebus_murinus
ENSSHAG00000014914	LSM12	100	94.304	ENSMOCG00000019878	-	81	94.595	Microtus_ochrogaster
ENSSHAG00000014914	LSM12	100	77.215	ENSMOCG00000017015	-	69	77.215	Microtus_ochrogaster
ENSSHAG00000014914	LSM12	100	83.544	ENSMMOG00000020848	lsm12b	81	83.544	Mola_mola
ENSSHAG00000014914	LSM12	100	84.177	ENSMALG00000007578	lsm12b	81	84.177	Monopterus_albus
ENSSHAG00000014914	LSM12	100	93.671	MGP_CAROLIEiJ_G0017241	Lsm12	81	93.694	Mus_caroli
ENSSHAG00000014914	LSM12	100	94.304	ENSMUSG00000020922	Lsm12	81	94.595	Mus_musculus
ENSSHAG00000014914	LSM12	100	85.143	MGP_PahariEiJ_G0018371	Lsm12	81	94.595	Mus_pahari
ENSSHAG00000014914	LSM12	100	93.671	MGP_SPRETEiJ_G0018084	Lsm12	79	96.296	Mus_spretus
ENSSHAG00000014914	LSM12	100	93.671	ENSMLUG00000006391	LSM12	81	93.671	Myotis_lucifugus
ENSSHAG00000014914	LSM12	96	72.848	ENSNGAG00000015429	-	77	72.848	Nannospalax_galili
ENSSHAG00000014914	LSM12	100	94.304	ENSNGAG00000001870	Lsm12	81	94.595	Nannospalax_galili
ENSSHAG00000014914	LSM12	100	83.544	ENSNBRG00000006266	lsm12b	81	83.544	Neolamprologus_brichardi
ENSSHAG00000014914	LSM12	100	94.304	ENSNLEG00000005580	-	81	94.595	Nomascus_leucogenys
ENSSHAG00000014914	LSM12	81	97.656	ENSMEUG00000007501	-	78	97.656	Notamacropus_eugenii
ENSSHAG00000014914	LSM12	100	94.304	ENSOPRG00000008552	LSM12	81	94.304	Ochotona_princeps
ENSSHAG00000014914	LSM12	100	94.304	ENSODEG00000017998	-	81	94.595	Octodon_degus
ENSSHAG00000014914	LSM12	100	84.177	ENSODEG00000007886	-	61	84.177	Octodon_degus
ENSSHAG00000014914	LSM12	100	83.544	ENSONIG00000007933	lsm12b	81	83.544	Oreochromis_niloticus
ENSSHAG00000014914	LSM12	51	91.358	ENSOANG00000031724	-	100	91.358	Ornithorhynchus_anatinus
ENSSHAG00000014914	LSM12	99	86.624	ENSOCUG00000024823	-	81	86.624	Oryctolagus_cuniculus
ENSSHAG00000014914	LSM12	99	87.898	ENSOCUG00000021254	-	81	87.898	Oryctolagus_cuniculus
ENSSHAG00000014914	LSM12	99	89.172	ENSOCUG00000027889	-	81	89.172	Oryctolagus_cuniculus
ENSSHAG00000014914	LSM12	97	96.104	ENSOCUG00000008566	-	78	96.104	Oryctolagus_cuniculus
ENSSHAG00000014914	LSM12	100	83.544	ENSORLG00000011310	lsm12b	81	83.544	Oryzias_latipes
ENSSHAG00000014914	LSM12	100	83.544	ENSORLG00020002060	lsm12b	74	83.544	Oryzias_latipes_hni
ENSSHAG00000014914	LSM12	100	83.544	ENSORLG00015001647	lsm12b	74	83.544	Oryzias_latipes_hsok
ENSSHAG00000014914	LSM12	100	83.544	ENSOMEG00000006184	lsm12b	74	83.544	Oryzias_melastigma
ENSSHAG00000014914	LSM12	100	93.671	ENSOGAG00000010489	LSM12	81	93.671	Otolemur_garnettii
ENSSHAG00000014914	LSM12	100	93.750	ENSOARG00000006589	LSM12	80	93.750	Ovis_aries
ENSSHAG00000014914	LSM12	97	96.078	ENSPPAG00000034974	-	83	96.078	Pan_paniscus
ENSSHAG00000014914	LSM12	100	94.304	ENSPPRG00000023420	LSM12	81	94.304	Panthera_pardus
ENSSHAG00000014914	LSM12	70	92.793	ENSPTIG00000014850	-	81	92.793	Panthera_tigris_altaica
ENSSHAG00000014914	LSM12	97	96.078	ENSPTIG00000012704	-	82	96.078	Panthera_tigris_altaica
ENSSHAG00000014914	LSM12	100	94.304	ENSPTRG00000009261	LSM12	81	94.595	Pan_troglodytes
ENSSHAG00000014914	LSM12	100	94.304	ENSPANG00000021315	-	81	94.595	Papio_anubis
ENSSHAG00000014914	LSM12	100	83.544	ENSPKIG00000021058	lsm12b	81	83.544	Paramormyrops_kingsleyae
ENSSHAG00000014914	LSM12	100	74.051	ENSPKIG00000017932	-	81	74.051	Paramormyrops_kingsleyae
ENSSHAG00000014914	LSM12	100	83.544	ENSPMGG00000021344	lsm12b	81	83.544	Periophthalmus_magnuspinnatus
ENSSHAG00000014914	LSM12	100	94.304	ENSPEMG00000012199	Lsm12	81	94.595	Peromyscus_maniculatus_bairdii
ENSSHAG00000014914	LSM12	87	64.234	ENSPMAG00000005461	lsm12a	79	64.234	Petromyzon_marinus
ENSSHAG00000014914	LSM12	100	98.101	ENSPCIG00000020244	LSM12	81	98.101	Phascolarctos_cinereus
ENSSHAG00000014914	LSM12	100	81.646	ENSPFOG00000015930	lsm12b	81	81.646	Poecilia_formosa
ENSSHAG00000014914	LSM12	100	81.646	ENSPLAG00000021089	lsm12b	81	81.646	Poecilia_latipinna
ENSSHAG00000014914	LSM12	100	81.646	ENSPMEG00000012961	lsm12b	81	81.646	Poecilia_mexicana
ENSSHAG00000014914	LSM12	100	82.911	ENSPREG00000010236	lsm12b	88	82.911	Poecilia_reticulata
ENSSHAG00000014914	LSM12	100	94.304	ENSPPYG00000008344	LSM12	81	94.304	Pongo_abelii
ENSSHAG00000014914	LSM12	81	95.312	ENSPCAG00000008790	LSM12	81	95.312	Procavia_capensis
ENSSHAG00000014914	LSM12	100	94.304	ENSPCOG00000027951	LSM12	81	94.595	Propithecus_coquereli
ENSSHAG00000014914	LSM12	100	93.671	ENSPVAG00000013706	LSM12	81	93.671	Pteropus_vampyrus
ENSSHAG00000014914	LSM12	100	83.544	ENSPNYG00000003386	lsm12b	81	83.544	Pundamilia_nyererei
ENSSHAG00000014914	LSM12	100	76.582	ENSPNAG00000018435	lsm12a	81	76.582	Pygocentrus_nattereri
ENSSHAG00000014914	LSM12	100	81.646	ENSPNAG00000004186	lsm12b	81	81.646	Pygocentrus_nattereri
ENSSHAG00000014914	LSM12	100	94.304	ENSRNOG00000020894	Lsm12	81	94.304	Rattus_norvegicus
ENSSHAG00000014914	LSM12	100	94.304	ENSRBIG00000027910	LSM12	81	94.595	Rhinopithecus_bieti
ENSSHAG00000014914	LSM12	100	94.304	ENSRROG00000045530	-	81	94.595	Rhinopithecus_roxellana
ENSSHAG00000014914	LSM12	73	79.310	ENSRROG00000000537	-	80	79.310	Rhinopithecus_roxellana
ENSSHAG00000014914	LSM12	75	32.824	YHR121W	-	68	32.824	Saccharomyces_cerevisiae
ENSSHAG00000014914	LSM12	100	94.304	ENSSBOG00000025310	LSM12	81	94.595	Saimiri_boliviensis_boliviensis
ENSSHAG00000014914	LSM12	100	84.177	ENSSFOG00015009612	lsm12	81	84.177	Scleropages_formosus
ENSSHAG00000014914	LSM12	100	81.646	ENSSFOG00015020392	lsm12a	81	81.646	Scleropages_formosus
ENSSHAG00000014914	LSM12	100	84.177	ENSSMAG00000008089	lsm12b	81	84.177	Scophthalmus_maximus
ENSSHAG00000014914	LSM12	100	84.810	ENSSDUG00000012711	lsm12b	81	84.810	Seriola_dumerili
ENSSHAG00000014914	LSM12	100	84.810	ENSSLDG00000007404	lsm12b	81	84.810	Seriola_lalandi_dorsalis
ENSSHAG00000014914	LSM12	97	95.425	ENSSARG00000005537	LSM12	100	95.425	Sorex_araneus
ENSSHAG00000014914	LSM12	100	94.304	ENSSPUG00000011984	LSM12	81	94.304	Sphenodon_punctatus
ENSSHAG00000014914	LSM12	100	84.177	ENSSPAG00000017058	lsm12b	81	84.177	Stegastes_partitus
ENSSHAG00000014914	LSM12	100	94.304	ENSSSCG00000032394	LSM12	81	94.304	Sus_scrofa
ENSSHAG00000014914	LSM12	100	82.278	ENSTRUG00000007121	lsm12b	81	82.278	Takifugu_rubripes
ENSSHAG00000014914	LSM12	100	82.911	ENSTNIG00000014436	lsm12b	81	82.911	Tetraodon_nigroviridis
ENSSHAG00000014914	LSM12	100	89.873	ENSTBEG00000012392	-	81	89.873	Tupaia_belangeri
ENSSHAG00000014914	LSM12	100	93.671	ENSTBEG00000012523	-	81	93.671	Tupaia_belangeri
ENSSHAG00000014914	LSM12	100	94.304	ENSTTRG00000010433	LSM12	81	94.304	Tursiops_truncatus
ENSSHAG00000014914	LSM12	100	94.304	ENSUAMG00000006313	LSM12	98	94.304	Ursus_americanus
ENSSHAG00000014914	LSM12	97	96.104	ENSUMAG00000012987	LSM12	88	96.104	Ursus_maritimus
ENSSHAG00000014914	LSM12	100	87.342	ENSVPAG00000011145	LSM12	81	87.342	Vicugna_pacos
ENSSHAG00000014914	LSM12	100	94.304	ENSVVUG00000017581	LSM12	81	94.304	Vulpes_vulpes
ENSSHAG00000014914	LSM12	100	62.658	ENSXETG00000003371	lsm12	76	62.658	Xenopus_tropicalis
ENSSHAG00000014914	LSM12	100	82.911	ENSXCOG00000003994	lsm12b	81	82.911	Xiphophorus_couchianus
ENSSHAG00000014914	LSM12	100	82.911	ENSXMAG00000020950	lsm12b	81	82.911	Xiphophorus_maculatus