EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000014986 (Gene tree)
Gene ID: 100918346
Gene Symbol: SUB1
Alias: PC4|p14|p15
Full Name: SUB1 homolog%2C transcriptional regulator
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 19539 bases
Position: chrGL841298.1:1647010-1666548
Accession: 100918346
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000017650	PC4	PF02229.16	5.3e-25	1	1
ENSSHAP00000017651	PC4	PF02229.16	5.8e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000017795	SUB1-201	593	-	ENSSHAP00000017650	126 (aa)	XP_003760002	G3WQE5
ENSSHAT00000017796	SUB1-202	402	-	ENSSHAP00000017651	133 (aa)	-	G3WQE6

Gene Model

Click here to download ENSSHAG00000014986's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000014986's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000014986	SUB1	100	88.189	ENSG00000113387	SUB1	100	90.551	Homo_sapiens
ENSSHAG00000014986	SUB1	100	73.016	ENSAPOG00000005917	SUB1	100	69.048	Acanthochromis_polyacanthus
ENSSHAG00000014986	SUB1	100	88.189	ENSAMEG00000006238	SUB1	95	90.551	Ailuropoda_melanoleuca
ENSSHAG00000014986	SUB1	100	75.397	ENSACIG00000015976	sub1b	100	71.429	Amphilophus_citrinellus
ENSSHAG00000014986	SUB1	85	71.028	ENSAOCG00000002323	-	75	75.824	Amphiprion_ocellaris
ENSSHAG00000014986	SUB1	91	72.174	ENSAOCG00000007313	-	83	77.451	Amphiprion_ocellaris
ENSSHAG00000014986	SUB1	100	75.397	ENSAPEG00000024347	sub1b	100	71.429	Amphiprion_percula
ENSSHAG00000014986	SUB1	87	65.766	ENSAPEG00000017151	-	71	75.824	Amphiprion_percula
ENSSHAG00000014986	SUB1	52	72.308	ENSAPEG00000014618	-	76	62.195	Amphiprion_percula
ENSSHAG00000014986	SUB1	100	75.397	ENSATEG00000010340	sub1b	100	71.429	Anabas_testudineus
ENSSHAG00000014986	SUB1	100	81.955	ENSACAG00000007974	SUB1	100	81.955	Anolis_carolinensis
ENSSHAG00000014986	SUB1	100	88.189	ENSANAG00000011651	-	100	90.551	Aotus_nancymaae
ENSSHAG00000014986	SUB1	100	88.095	ENSANAG00000023392	-	83	88.095	Aotus_nancymaae
ENSSHAG00000014986	SUB1	100	75.397	ENSACLG00000016875	sub1b	64	71.429	Astatotilapia_calliptera
ENSSHAG00000014986	SUB1	100	76.378	ENSAMXG00000037104	sub1b	100	73.228	Astyanax_mexicanus
ENSSHAG00000014986	SUB1	100	88.189	ENSBTAG00000021965	SUB1	100	90.551	Bos_taurus
ENSSHAG00000014986	SUB1	75	41.237	WBGene00011743	T13F2.2	78	41.584	Caenorhabditis_elegans
ENSSHAG00000014986	SUB1	80	85.294	ENSCJAG00000018718	SUB1	98	88.235	Callithrix_jacchus
ENSSHAG00000014986	SUB1	90	82.456	ENSCAFG00000024488	-	86	86.111	Canis_familiaris
ENSSHAG00000014986	SUB1	100	88.189	ENSCAFG00000018879	-	88	90.551	Canis_familiaris
ENSSHAG00000014986	SUB1	100	88.189	ENSCAFG00000016713	-	96	90.551	Canis_familiaris
ENSSHAG00000014986	SUB1	100	85.938	ENSCAFG00020011479	-	77	88.281	Canis_lupus_dingo
ENSSHAG00000014986	SUB1	100	88.189	ENSCAFG00020016840	-	100	90.551	Canis_lupus_dingo
ENSSHAG00000014986	SUB1	100	88.189	ENSCHIG00000008460	SUB1	100	90.551	Capra_hircus
ENSSHAG00000014986	SUB1	100	80.769	ENSTSYG00000014069	-	93	83.846	Carlito_syrichta
ENSSHAG00000014986	SUB1	100	88.189	ENSTSYG00000029948	-	100	90.551	Carlito_syrichta
ENSSHAG00000014986	SUB1	100	76.378	ENSTSYG00000035366	-	83	78.740	Carlito_syrichta
ENSSHAG00000014986	SUB1	100	88.189	ENSCPOG00000031334	SUB1	100	90.551	Cavia_porcellus
ENSSHAG00000014986	SUB1	100	88.189	ENSCCAG00000023605	-	100	90.551	Cebus_capucinus
ENSSHAG00000014986	SUB1	100	83.465	ENSCCAG00000020604	-	100	85.827	Cebus_capucinus
ENSSHAG00000014986	SUB1	100	84.252	ENSCCAG00000033751	-	98	84.733	Cebus_capucinus
ENSSHAG00000014986	SUB1	100	80.952	ENSCCAG00000017043	-	98	77.444	Cebus_capucinus
ENSSHAG00000014986	SUB1	100	88.189	ENSCATG00000031199	SUB1	100	90.551	Cercocebus_atys
ENSSHAG00000014986	SUB1	100	86.719	ENSCLAG00000007522	SUB1	100	89.844	Chinchilla_lanigera
ENSSHAG00000014986	SUB1	100	88.189	ENSCSAG00000017172	-	100	90.551	Chlorocebus_sabaeus
ENSSHAG00000014986	SUB1	100	87.402	ENSCSAG00000019449	-	100	87.402	Chlorocebus_sabaeus
ENSSHAG00000014986	SUB1	100	92.857	ENSCPBG00000024218	SUB1	79	92.857	Chrysemys_picta_bellii
ENSSHAG00000014986	SUB1	100	88.189	ENSCANG00000029372	SUB1	100	90.551	Colobus_angolensis_palliatus
ENSSHAG00000014986	SUB1	100	74.603	ENSCANG00000028665	-	93	73.077	Colobus_angolensis_palliatus
ENSSHAG00000014986	SUB1	100	75.591	ENSCGRG00001014660	-	100	75.591	Cricetulus_griseus_chok1gshd
ENSSHAG00000014986	SUB1	100	73.228	ENSCGRG00001016254	-	100	73.228	Cricetulus_griseus_chok1gshd
ENSSHAG00000014986	SUB1	100	88.189	ENSCGRG00001003473	-	100	88.189	Cricetulus_griseus_chok1gshd
ENSSHAG00000014986	SUB1	100	75.591	ENSCGRG00000019368	-	100	75.591	Cricetulus_griseus_crigri
ENSSHAG00000014986	SUB1	100	75.591	ENSCGRG00000001489	-	100	75.591	Cricetulus_griseus_crigri
ENSSHAG00000014986	SUB1	100	88.189	ENSCGRG00000001133	-	100	88.189	Cricetulus_griseus_crigri
ENSSHAG00000014986	SUB1	100	72.222	ENSDARG00000007720	sub1b	100	69.048	Danio_rerio
ENSSHAG00000014986	SUB1	99	79.200	ENSDARG00000053446	sub1a	100	76.984	Danio_rerio
ENSSHAG00000014986	SUB1	100	86.614	ENSDNOG00000040794	-	100	88.976	Dasypus_novemcinctus
ENSSHAG00000014986	SUB1	100	85.039	ENSDNOG00000032396	-	100	87.402	Dasypus_novemcinctus
ENSSHAG00000014986	SUB1	100	91.339	ENSDORG00000013916	Sub1	100	91.339	Dipodomys_ordii
ENSSHAG00000014986	SUB1	68	56.977	ENSEBUG00000008746	sub1a	53	53.000	Eptatretus_burgeri
ENSSHAG00000014986	SUB1	100	88.189	ENSEASG00005007099	SUB1	100	90.551	Equus_asinus_asinus
ENSSHAG00000014986	SUB1	100	88.189	ENSECAG00000012399	SUB1	100	90.551	Equus_caballus
ENSSHAG00000014986	SUB1	79	85.149	ENSEEUG00000000436	SUB1	99	88.119	Erinaceus_europaeus
ENSSHAG00000014986	SUB1	100	88.189	ENSFCAG00000037288	SUB1	100	90.551	Felis_catus
ENSSHAG00000014986	SUB1	100	90.476	ENSFALG00000002143	SUB1	87	90.476	Ficedula_albicollis
ENSSHAG00000014986	SUB1	100	88.189	ENSFDAG00000017179	SUB1	100	90.551	Fukomys_damarensis
ENSSHAG00000014986	SUB1	100	92.063	ENSGALG00000003248	SUB1	100	92.063	Gallus_gallus
ENSSHAG00000014986	SUB1	100	52.756	ENSGALG00000027147	-	100	53.543	Gallus_gallus
ENSSHAG00000014986	SUB1	100	91.270	ENSGALG00000034905	-	100	91.270	Gallus_gallus
ENSSHAG00000014986	SUB1	100	73.810	ENSGACG00000003912	sub1b	100	69.841	Gasterosteus_aculeatus
ENSSHAG00000014986	SUB1	100	91.270	ENSGAGG00000013535	SUB1	100	91.270	Gopherus_agassizii
ENSSHAG00000014986	SUB1	100	88.189	ENSGGOG00000040900	SUB1	100	90.551	Gorilla_gorilla
ENSSHAG00000014986	SUB1	82	77.670	ENSHBUG00000013953	sub1b	77	77.670	Haplochromis_burtoni
ENSSHAG00000014986	SUB1	100	88.189	ENSHGLG00000006749	SUB1	100	90.551	Heterocephalus_glaber_female
ENSSHAG00000014986	SUB1	100	88.189	ENSHGLG00100014344	SUB1	100	90.551	Heterocephalus_glaber_male
ENSSHAG00000014986	SUB1	100	70.635	ENSHCOG00000001809	sub1b	100	66.667	Hippocampus_comes
ENSSHAG00000014986	SUB1	100	73.810	ENSIPUG00000008166	sub1	100	70.635	Ictalurus_punctatus
ENSSHAG00000014986	SUB1	100	75.969	ENSIPUG00000024367	SUB1	100	72.093	Ictalurus_punctatus
ENSSHAG00000014986	SUB1	100	87.402	ENSSTOG00000019364	SUB1	100	89.764	Ictidomys_tridecemlineatus
ENSSHAG00000014986	SUB1	100	85.039	ENSJJAG00000018885	Sub1	100	85.039	Jaculus_jaculus
ENSSHAG00000014986	SUB1	99	73.600	ENSLBEG00000010728	sub1b	100	69.048	Labrus_bergylta
ENSSHAG00000014986	SUB1	52	92.308	ENSLACG00000001068	SUB1	100	92.308	Latimeria_chalumnae
ENSSHAG00000014986	SUB1	100	79.365	ENSLOCG00000006692	sub1b	100	75.397	Lepisosteus_oculatus
ENSSHAG00000014986	SUB1	100	89.764	ENSLAFG00000011006	-	100	90.551	Loxodonta_africana
ENSSHAG00000014986	SUB1	100	89.764	ENSLAFG00000032088	-	100	90.551	Loxodonta_africana
ENSSHAG00000014986	SUB1	100	79.528	ENSMFAG00000045643	-	61	81.890	Macaca_fascicularis
ENSSHAG00000014986	SUB1	100	88.189	ENSMFAG00000040728	SUB1	100	90.551	Macaca_fascicularis
ENSSHAG00000014986	SUB1	100	88.189	ENSMMUG00000046181	SUB1	100	90.551	Macaca_mulatta
ENSSHAG00000014986	SUB1	100	88.189	ENSMNEG00000037046	SUB1	100	90.551	Macaca_nemestrina
ENSSHAG00000014986	SUB1	100	85.827	ENSMLEG00000030509	-	98	85.606	Mandrillus_leucophaeus
ENSSHAG00000014986	SUB1	100	73.810	ENSMLEG00000043436	-	93	72.308	Mandrillus_leucophaeus
ENSSHAG00000014986	SUB1	100	88.189	ENSMLEG00000037017	-	100	90.551	Mandrillus_leucophaeus
ENSSHAG00000014986	SUB1	100	73.810	ENSMAMG00000018428	sub1b	100	69.841	Mastacembelus_armatus
ENSSHAG00000014986	SUB1	100	75.397	ENSMZEG00005021252	sub1b	100	71.429	Maylandia_zebra
ENSSHAG00000014986	SUB1	100	92.063	ENSMGAG00000002906	SUB1	100	92.063	Meleagris_gallopavo
ENSSHAG00000014986	SUB1	100	51.181	ENSMGAG00000001200	-	95	51.181	Meleagris_gallopavo
ENSSHAG00000014986	SUB1	100	88.189	ENSMAUG00000020232	Sub1	100	88.189	Mesocricetus_auratus
ENSSHAG00000014986	SUB1	100	88.189	ENSMICG00000014535	SUB1	100	90.551	Microcebus_murinus
ENSSHAG00000014986	SUB1	100	87.402	ENSMOCG00000018930	-	100	87.402	Microtus_ochrogaster
ENSSHAG00000014986	SUB1	100	77.165	ENSMOCG00000016424	-	100	77.165	Microtus_ochrogaster
ENSSHAG00000014986	SUB1	100	90.647	ENSMODG00000020410	SUB1	100	90.647	Monodelphis_domestica
ENSSHAG00000014986	SUB1	100	75.397	ENSMALG00000007163	sub1b	81	76.984	Monopterus_albus
ENSSHAG00000014986	SUB1	100	88.189	MGP_CAROLIEiJ_G0019676	Sub1	100	88.189	Mus_caroli
ENSSHAG00000014986	SUB1	100	88.976	ENSMUSG00000022205	Sub1	100	88.976	Mus_musculus
ENSSHAG00000014986	SUB1	100	87.402	MGP_PahariEiJ_G0016056	Sub1	100	87.402	Mus_pahari
ENSSHAG00000014986	SUB1	100	88.976	MGP_SPRETEiJ_G0020573	Sub1	100	88.976	Mus_spretus
ENSSHAG00000014986	SUB1	100	87.402	ENSMPUG00000018418	-	100	89.764	Mustela_putorius_furo
ENSSHAG00000014986	SUB1	100	88.189	ENSMPUG00000015185	-	100	90.551	Mustela_putorius_furo
ENSSHAG00000014986	SUB1	100	88.189	ENSMLUG00000013685	-	100	87.313	Myotis_lucifugus
ENSSHAG00000014986	SUB1	100	85.039	ENSMLUG00000009236	-	95	85.039	Myotis_lucifugus
ENSSHAG00000014986	SUB1	100	78.571	ENSNGAG00000017212	-	100	78.571	Nannospalax_galili
ENSSHAG00000014986	SUB1	100	84.921	ENSNGAG00000010782	-	84	84.921	Nannospalax_galili
ENSSHAG00000014986	SUB1	100	88.189	ENSNGAG00000014072	-	100	88.189	Nannospalax_galili
ENSSHAG00000014986	SUB1	82	76.699	ENSNBRG00000008451	sub1b	84	76.699	Neolamprologus_brichardi
ENSSHAG00000014986	SUB1	100	88.189	ENSNLEG00000018383	-	95	90.551	Nomascus_leucogenys
ENSSHAG00000014986	SUB1	100	87.402	ENSNLEG00000036068	SUB1	100	89.764	Nomascus_leucogenys
ENSSHAG00000014986	SUB1	100	84.921	ENSNLEG00000035968	-	100	84.921	Nomascus_leucogenys
ENSSHAG00000014986	SUB1	100	100.000	ENSMEUG00000007770	SUB1	100	100.000	Notamacropus_eugenii
ENSSHAG00000014986	SUB1	100	85.827	ENSOPRG00000012887	SUB1	100	88.189	Ochotona_princeps
ENSSHAG00000014986	SUB1	100	88.189	ENSODEG00000001937	-	100	90.551	Octodon_degus
ENSSHAG00000014986	SUB1	85	85.185	ENSODEG00000015114	-	98	88.525	Octodon_degus
ENSSHAG00000014986	SUB1	100	84.252	ENSODEG00000014558	-	84	85.039	Octodon_degus
ENSSHAG00000014986	SUB1	100	93.651	ENSOANG00000002328	SUB1	100	90.226	Ornithorhynchus_anatinus
ENSSHAG00000014986	SUB1	100	86.614	ENSOCUG00000006262	SUB1	60	88.976	Oryctolagus_cuniculus
ENSSHAG00000014986	SUB1	100	88.189	ENSOGAG00000009012	-	100	90.551	Otolemur_garnettii
ENSSHAG00000014986	SUB1	98	87.097	ENSOGAG00000000337	-	100	89.516	Otolemur_garnettii
ENSSHAG00000014986	SUB1	100	88.189	ENSOARG00000012154	SUB1	100	90.551	Ovis_aries
ENSSHAG00000014986	SUB1	100	88.189	ENSPPAG00000011212	SUB1	100	90.551	Pan_paniscus
ENSSHAG00000014986	SUB1	100	88.189	ENSPPRG00000008557	SUB1	100	90.551	Panthera_pardus
ENSSHAG00000014986	SUB1	100	88.189	ENSPTIG00000009466	SUB1	100	90.551	Panthera_tigris_altaica
ENSSHAG00000014986	SUB1	100	81.890	ENSPTRG00000041644	-	100	85.039	Pan_troglodytes
ENSSHAG00000014986	SUB1	100	88.189	ENSPTRG00000048895	SUB1	100	90.551	Pan_troglodytes
ENSSHAG00000014986	SUB1	100	73.016	ENSPANG00000033272	-	93	71.538	Papio_anubis
ENSSHAG00000014986	SUB1	100	87.402	ENSPANG00000035601	-	100	87.402	Papio_anubis
ENSSHAG00000014986	SUB1	100	88.189	ENSPANG00000000339	-	97	90.551	Papio_anubis
ENSSHAG00000014986	SUB1	100	85.827	ENSPANG00000000672	-	96	84.328	Papio_anubis
ENSSHAG00000014986	SUB1	100	88.189	ENSPANG00000002644	-	95	90.551	Papio_anubis
ENSSHAG00000014986	SUB1	100	75.397	ENSPKIG00000016923	sub1b	100	71.429	Paramormyrops_kingsleyae
ENSSHAG00000014986	SUB1	100	92.063	ENSPSIG00000005731	SUB1	95	92.063	Pelodiscus_sinensis
ENSSHAG00000014986	SUB1	100	88.889	ENSPCIG00000020827	-	100	90.476	Phascolarctos_cinereus
ENSSHAG00000014986	SUB1	100	100.000	ENSPCIG00000020907	-	100	100.000	Phascolarctos_cinereus
ENSSHAG00000014986	SUB1	100	82.677	ENSPPYG00000018347	-	100	85.827	Pongo_abelii
ENSSHAG00000014986	SUB1	100	88.189	ENSPPYG00000015379	SUB1	100	90.551	Pongo_abelii
ENSSHAG00000014986	SUB1	100	88.189	ENSPCOG00000014391	SUB1	100	90.551	Propithecus_coquereli
ENSSHAG00000014986	SUB1	100	88.189	ENSPVAG00000004785	SUB1	100	90.551	Pteropus_vampyrus
ENSSHAG00000014986	SUB1	100	75.397	ENSPNYG00000010975	sub1b	100	71.429	Pundamilia_nyererei
ENSSHAG00000014986	SUB1	100	73.228	ENSPNAG00000008693	sub1a	100	74.016	Pygocentrus_nattereri
ENSSHAG00000014986	SUB1	99	77.600	ENSPNAG00000005998	sub1b	99	73.600	Pygocentrus_nattereri
ENSSHAG00000014986	SUB1	100	88.976	ENSRNOG00000050563	Sub1	100	88.976	Rattus_norvegicus
ENSSHAG00000014986	SUB1	100	83.465	ENSRBIG00000031233	SUB1	100	85.827	Rhinopithecus_bieti
ENSSHAG00000014986	SUB1	100	80.952	ENSRROG00000042718	-	93	79.231	Rhinopithecus_roxellana
ENSSHAG00000014986	SUB1	100	88.189	ENSRROG00000040438	SUB1	100	90.551	Rhinopithecus_roxellana
ENSSHAG00000014986	SUB1	100	88.189	ENSSBOG00000026994	SUB1	100	90.551	Saimiri_boliviensis_boliviensis
ENSSHAG00000014986	SUB1	100	76.984	ENSSFOG00015017283	sub1b	100	73.810	Scleropages_formosus
ENSSHAG00000014986	SUB1	100	76.378	ENSSFOG00015018386	sub1b	100	78.740	Scleropages_formosus
ENSSHAG00000014986	SUB1	100	74.603	ENSSMAG00000000313	sub1b	100	70.635	Scophthalmus_maximus
ENSSHAG00000014986	SUB1	100	74.603	ENSSDUG00000013854	sub1b	80	73.684	Seriola_dumerili
ENSSHAG00000014986	SUB1	100	74.603	ENSSLDG00000000852	sub1b	100	70.635	Seriola_lalandi_dorsalis
ENSSHAG00000014986	SUB1	100	92.063	ENSSPUG00000016817	SUB1	100	92.063	Sphenodon_punctatus
ENSSHAG00000014986	SUB1	100	74.603	ENSSPAG00000019363	sub1b	100	70.635	Stegastes_partitus
ENSSHAG00000014986	SUB1	100	88.189	ENSSSCG00000032650	-	100	90.551	Sus_scrofa
ENSSHAG00000014986	SUB1	100	88.189	ENSSSCG00000040294	-	90	88.550	Sus_scrofa
ENSSHAG00000014986	SUB1	100	88.889	ENSTGUG00000001918	SUB1	100	88.889	Taeniopygia_guttata
ENSSHAG00000014986	SUB1	100	70.635	ENSTRUG00000024420	sub1b	100	70.635	Takifugu_rubripes
ENSSHAG00000014986	SUB1	100	69.841	ENSTNIG00000002700	sub1b	100	69.048	Tetraodon_nigroviridis
ENSSHAG00000014986	SUB1	100	82.677	ENSTBEG00000001790	-	100	85.039	Tupaia_belangeri
ENSSHAG00000014986	SUB1	100	86.614	ENSTBEG00000004053	-	100	88.976	Tupaia_belangeri
ENSSHAG00000014986	SUB1	100	86.614	ENSTBEG00000006504	-	100	88.976	Tupaia_belangeri
ENSSHAG00000014986	SUB1	99	80.952	ENSTBEG00000015821	-	100	83.333	Tupaia_belangeri
ENSSHAG00000014986	SUB1	100	82.677	ENSTBEG00000012861	-	100	85.039	Tupaia_belangeri
ENSSHAG00000014986	SUB1	100	81.890	ENSTBEG00000011247	-	99	84.252	Tupaia_belangeri
ENSSHAG00000014986	SUB1	80	87.255	ENSTTRG00000017324	SUB1	99	90.196	Tursiops_truncatus
ENSSHAG00000014986	SUB1	100	88.189	ENSUAMG00000000182	SUB1	100	90.551	Ursus_americanus
ENSSHAG00000014986	SUB1	100	88.189	ENSUMAG00000013792	SUB1	100	90.551	Ursus_maritimus
ENSSHAG00000014986	SUB1	100	81.746	ENSVPAG00000011012	SUB1	100	81.746	Vicugna_pacos
ENSSHAG00000014986	SUB1	89	78.761	ENSVVUG00000025193	-	92	83.636	Vulpes_vulpes
ENSSHAG00000014986	SUB1	100	88.189	ENSVVUG00000022166	-	100	90.551	Vulpes_vulpes
ENSSHAG00000014986	SUB1	100	82.031	ENSXETG00000027218	sub1	100	82.031	Xenopus_tropicalis