EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000015075 (Gene tree)
Gene ID: 100924593
Gene Symbol: EDC3
Alias: FLJ21128|LSM16|YJDC|YJEFN2|hYjeF_N2-15q23
Full Name: enhancer of mRNA decapping 3
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 50902 bases
Position: chrGL834424.1:1677579-1728480
Accession: 26114
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000017753	FDF	PF09532.10	4.6e-17	1	1
ENSSHAP00000017753	LSM14	PF12701.7	5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000017899	EDC3-201	1560	-	ENSSHAP00000017753	513 (aa)	-	G3WQP8

Gene Model

Click here to download ENSSHAG00000015075's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000015075's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000015075	EDC3	95	91.411	ENSG00000179151	EDC3	100	98.148	Homo_sapiens
ENSSHAG00000015075	EDC3	95	68.571	ENSAPOG00000010791	edc3	96	68.571	Acanthochromis_polyacanthus
ENSSHAG00000015075	EDC3	95	53.924	ENSAPOG00000008655	EDC3	96	53.924	Acanthochromis_polyacanthus
ENSSHAG00000015075	EDC3	95	91.002	ENSAMEG00000008963	EDC3	96	91.002	Ailuropoda_melanoleuca
ENSSHAG00000015075	EDC3	95	58.502	ENSACIG00000005330	EDC3	96	58.502	Amphilophus_citrinellus
ENSSHAG00000015075	EDC3	95	68.033	ENSACIG00000017751	edc3	96	68.033	Amphilophus_citrinellus
ENSSHAG00000015075	EDC3	95	68.776	ENSAOCG00000005431	edc3	96	68.776	Amphiprion_ocellaris
ENSSHAG00000015075	EDC3	95	56.680	ENSAOCG00000009103	-	96	56.680	Amphiprion_ocellaris
ENSSHAG00000015075	EDC3	95	55.870	ENSAPEG00000007841	EDC3	96	55.870	Amphiprion_percula
ENSSHAG00000015075	EDC3	95	68.776	ENSAPEG00000000968	edc3	96	68.776	Amphiprion_percula
ENSSHAG00000015075	EDC3	95	69.672	ENSATEG00000015505	edc3	96	69.672	Anabas_testudineus
ENSSHAG00000015075	EDC3	95	57.315	ENSATEG00000004205	-	96	57.315	Anabas_testudineus
ENSSHAG00000015075	EDC3	85	88.479	ENSAPLG00000008957	EDC3	96	88.479	Anas_platyrhynchos
ENSSHAG00000015075	EDC3	77	87.626	ENSACAG00000000460	-	100	87.626	Anolis_carolinensis
ENSSHAG00000015075	EDC3	95	91.616	ENSANAG00000024078	EDC3	96	91.616	Aotus_nancymaae
ENSSHAG00000015075	EDC3	95	56.707	ENSACLG00000018776	-	96	56.301	Astatotilapia_calliptera
ENSSHAG00000015075	EDC3	95	67.008	ENSACLG00000007232	edc3	96	67.008	Astatotilapia_calliptera
ENSSHAG00000015075	EDC3	95	69.919	ENSAMXG00000001589	edc3	96	69.919	Astyanax_mexicanus
ENSSHAG00000015075	EDC3	95	91.207	ENSBTAG00000007308	EDC3	96	91.207	Bos_taurus
ENSSHAG00000015075	EDC3	95	91.820	ENSCJAG00000017681	EDC3	96	91.820	Callithrix_jacchus
ENSSHAG00000015075	EDC3	95	91.616	ENSCAFG00000017935	EDC3	96	91.616	Canis_familiaris
ENSSHAG00000015075	EDC3	95	91.616	ENSCAFG00020003909	EDC3	96	91.616	Canis_lupus_dingo
ENSSHAG00000015075	EDC3	95	91.411	ENSCHIG00000023658	EDC3	96	91.411	Capra_hircus
ENSSHAG00000015075	EDC3	95	91.411	ENSTSYG00000004822	EDC3	96	91.411	Carlito_syrichta
ENSSHAG00000015075	EDC3	95	90.798	ENSCPOG00000015595	EDC3	96	90.798	Cavia_porcellus
ENSSHAG00000015075	EDC3	95	91.820	ENSCCAG00000021663	EDC3	96	91.820	Cebus_capucinus
ENSSHAG00000015075	EDC3	95	92.434	ENSCATG00000037511	EDC3	96	92.434	Cercocebus_atys
ENSSHAG00000015075	EDC3	95	89.775	ENSCLAG00000005700	EDC3	96	89.775	Chinchilla_lanigera
ENSSHAG00000015075	EDC3	95	92.434	ENSCSAG00000014239	EDC3	96	92.434	Chlorocebus_sabaeus
ENSSHAG00000015075	EDC3	95	89.980	ENSCPBG00000024239	EDC3	96	89.980	Chrysemys_picta_bellii
ENSSHAG00000015075	EDC3	95	37.109	ENSCING00000022142	-	96	37.109	Ciona_intestinalis
ENSSHAG00000015075	EDC3	95	92.434	ENSCANG00000028699	EDC3	96	92.434	Colobus_angolensis_palliatus
ENSSHAG00000015075	EDC3	95	92.229	ENSCGRG00001013874	Edc3	96	92.229	Cricetulus_griseus_chok1gshd
ENSSHAG00000015075	EDC3	95	92.229	ENSCGRG00000011885	Edc3	96	92.229	Cricetulus_griseus_crigri
ENSSHAG00000015075	EDC3	95	68.648	ENSCSEG00000012996	edc3	96	68.648	Cynoglossus_semilaevis
ENSSHAG00000015075	EDC3	95	69.530	ENSCVAG00000008023	edc3	96	69.530	Cyprinodon_variegatus
ENSSHAG00000015075	EDC3	95	68.293	ENSDARG00000051931	edc3	96	68.496	Danio_rerio
ENSSHAG00000015075	EDC3	95	79.637	ENSDNOG00000030661	EDC3	96	79.637	Dasypus_novemcinctus
ENSSHAG00000015075	EDC3	60	96.296	ENSETEG00000002398	-	60	96.296	Echinops_telfairi
ENSSHAG00000015075	EDC3	95	91.616	ENSEASG00005005071	EDC3	96	91.616	Equus_asinus_asinus
ENSSHAG00000015075	EDC3	95	91.616	ENSECAG00000017994	EDC3	96	91.616	Equus_caballus
ENSSHAG00000015075	EDC3	95	65.447	ENSELUG00000005794	edc3	96	65.447	Esox_lucius
ENSSHAG00000015075	EDC3	95	61.429	ENSELUG00000007607	EDC3	96	61.429	Esox_lucius
ENSSHAG00000015075	EDC3	98	88.690	ENSFCAG00000002014	EDC3	96	90.798	Felis_catus
ENSSHAG00000015075	EDC3	95	87.885	ENSFALG00000004543	EDC3	94	87.885	Ficedula_albicollis
ENSSHAG00000015075	EDC3	95	90.184	ENSFDAG00000012582	EDC3	96	90.184	Fukomys_damarensis
ENSSHAG00000015075	EDC3	95	69.184	ENSFHEG00000009375	edc3	96	69.388	Fundulus_heteroclitus
ENSSHAG00000015075	EDC3	95	68.228	ENSGMOG00000002715	edc3	96	68.228	Gadus_morhua
ENSSHAG00000015075	EDC3	95	90.144	ENSGALG00000040181	EDC3	96	90.144	Gallus_gallus
ENSSHAG00000015075	EDC3	95	67.213	ENSGAFG00000014433	edc3	96	67.213	Gambusia_affinis
ENSSHAG00000015075	EDC3	95	55.781	ENSGACG00000014671	EDC3	96	56.389	Gasterosteus_aculeatus
ENSSHAG00000015075	EDC3	95	68.238	ENSGACG00000009783	edc3	96	68.238	Gasterosteus_aculeatus
ENSSHAG00000015075	EDC3	95	89.959	ENSGAGG00000023477	EDC3	96	89.959	Gopherus_agassizii
ENSSHAG00000015075	EDC3	95	91.616	ENSGGOG00000003552	EDC3	96	91.616	Gorilla_gorilla
ENSSHAG00000015075	EDC3	95	67.008	ENSHBUG00000003635	edc3	96	67.008	Haplochromis_burtoni
ENSSHAG00000015075	EDC3	95	56.707	ENSHBUG00000020817	EDC3	96	56.301	Haplochromis_burtoni
ENSSHAG00000015075	EDC3	98	65.020	ENSHCOG00000016834	edc3	99	66.008	Hippocampus_comes
ENSSHAG00000015075	EDC3	97	68.515	ENSIPUG00000005695	edc3	96	69.919	Ictalurus_punctatus
ENSSHAG00000015075	EDC3	95	91.820	ENSSTOG00000013936	EDC3	96	91.820	Ictidomys_tridecemlineatus
ENSSHAG00000015075	EDC3	95	91.002	ENSJJAG00000008074	Edc3	96	91.002	Jaculus_jaculus
ENSSHAG00000015075	EDC3	95	68.033	ENSKMAG00000001243	edc3	96	68.228	Kryptolebias_marmoratus
ENSSHAG00000015075	EDC3	95	54.806	ENSKMAG00000001987	EDC3	96	54.806	Kryptolebias_marmoratus
ENSSHAG00000015075	EDC3	95	68.443	ENSLBEG00000013435	edc3	95	68.367	Labrus_bergylta
ENSSHAG00000015075	EDC3	95	56.478	ENSLBEG00000017984	EDC3	96	56.478	Labrus_bergylta
ENSSHAG00000015075	EDC3	95	78.990	ENSLACG00000014149	EDC3	96	78.990	Latimeria_chalumnae
ENSSHAG00000015075	EDC3	95	67.683	ENSLOCG00000014625	edc3	96	67.683	Lepisosteus_oculatus
ENSSHAG00000015075	EDC3	95	91.189	ENSLAFG00000002992	EDC3	96	91.189	Loxodonta_africana
ENSSHAG00000015075	EDC3	95	92.229	ENSMFAG00000043074	EDC3	96	92.229	Macaca_fascicularis
ENSSHAG00000015075	EDC3	95	92.229	ENSMMUG00000011071	EDC3	96	92.229	Macaca_mulatta
ENSSHAG00000015075	EDC3	95	92.229	ENSMNEG00000035316	EDC3	96	92.229	Macaca_nemestrina
ENSSHAG00000015075	EDC3	95	92.434	ENSMLEG00000030372	EDC3	96	92.434	Mandrillus_leucophaeus
ENSSHAG00000015075	EDC3	95	55.466	ENSMAMG00000005423	-	96	55.466	Mastacembelus_armatus
ENSSHAG00000015075	EDC3	95	69.262	ENSMAMG00000000505	edc3	96	69.262	Mastacembelus_armatus
ENSSHAG00000015075	EDC3	95	67.008	ENSMZEG00005004892	edc3	96	67.008	Maylandia_zebra
ENSSHAG00000015075	EDC3	95	57.520	ENSMZEG00005005654	EDC3	96	57.520	Maylandia_zebra
ENSSHAG00000015075	EDC3	95	89.117	ENSMGAG00000002617	EDC3	96	89.117	Meleagris_gallopavo
ENSSHAG00000015075	EDC3	95	90.798	ENSMICG00000043190	EDC3	96	90.798	Microcebus_murinus
ENSSHAG00000015075	EDC3	95	92.025	ENSMOCG00000016205	Edc3	96	92.025	Microtus_ochrogaster
ENSSHAG00000015075	EDC3	95	68.033	ENSMMOG00000012278	edc3	96	68.443	Mola_mola
ENSSHAG00000015075	EDC3	95	97.137	ENSMODG00000009442	EDC3	96	97.137	Monodelphis_domestica
ENSSHAG00000015075	EDC3	95	68.443	ENSMALG00000008658	edc3	96	68.443	Monopterus_albus
ENSSHAG00000015075	EDC3	95	90.593	MGP_CAROLIEiJ_G0032280	Edc3	100	98.462	Mus_caroli
ENSSHAG00000015075	EDC3	95	90.593	ENSMUSG00000038957	Edc3	100	98.462	Mus_musculus
ENSSHAG00000015075	EDC3	95	90.798	MGP_PahariEiJ_G0015146	Edc3	100	98.462	Mus_pahari
ENSSHAG00000015075	EDC3	95	90.798	MGP_SPRETEiJ_G0033420	Edc3	100	98.462	Mus_spretus
ENSSHAG00000015075	EDC3	95	91.616	ENSMPUG00000017293	EDC3	96	91.616	Mustela_putorius_furo
ENSSHAG00000015075	EDC3	95	90.631	ENSMLUG00000016382	EDC3	96	90.631	Myotis_lucifugus
ENSSHAG00000015075	EDC3	95	91.411	ENSNGAG00000010923	Edc3	96	91.411	Nannospalax_galili
ENSSHAG00000015075	EDC3	95	57.317	ENSNBRG00000007881	EDC3	96	57.317	Neolamprologus_brichardi
ENSSHAG00000015075	EDC3	95	67.418	ENSNBRG00000002434	edc3	96	67.418	Neolamprologus_brichardi
ENSSHAG00000015075	EDC3	95	81.391	ENSNLEG00000014577	EDC3	96	81.391	Nomascus_leucogenys
ENSSHAG00000015075	EDC3	95	97.947	ENSMEUG00000009077	EDC3	96	97.947	Notamacropus_eugenii
ENSSHAG00000015075	EDC3	74	94.444	ENSOPRG00000009540	-	75	94.444	Ochotona_princeps
ENSSHAG00000015075	EDC3	95	67.418	ENSONIG00000008434	edc3	96	67.418	Oreochromis_niloticus
ENSSHAG00000015075	EDC3	95	58.065	ENSONIG00000002932	-	96	58.065	Oreochromis_niloticus
ENSSHAG00000015075	EDC3	77	88.384	ENSOCUG00000017740	EDC3	86	88.384	Oryctolagus_cuniculus
ENSSHAG00000015075	EDC3	95	55.193	ENSORLG00000014399	-	94	55.193	Oryzias_latipes
ENSSHAG00000015075	EDC3	95	67.623	ENSORLG00000004883	edc3	96	67.623	Oryzias_latipes
ENSSHAG00000015075	EDC3	95	55.193	ENSORLG00020019446	-	96	55.193	Oryzias_latipes_hni
ENSSHAG00000015075	EDC3	95	67.623	ENSORLG00020012262	edc3	96	67.623	Oryzias_latipes_hni
ENSSHAG00000015075	EDC3	95	67.623	ENSORLG00015005634	edc3	96	67.623	Oryzias_latipes_hsok
ENSSHAG00000015075	EDC3	95	55.193	ENSORLG00015017635	-	92	55.397	Oryzias_latipes_hsok
ENSSHAG00000015075	EDC3	98	66.996	ENSOMEG00000014026	edc3	99	66.996	Oryzias_melastigma
ENSSHAG00000015075	EDC3	95	55.263	ENSOMEG00000017354	EDC3	96	55.263	Oryzias_melastigma
ENSSHAG00000015075	EDC3	95	90.593	ENSOGAG00000014441	EDC3	96	91.207	Otolemur_garnettii
ENSSHAG00000015075	EDC3	95	90.612	ENSOARG00000003476	EDC3	96	91.020	Ovis_aries
ENSSHAG00000015075	EDC3	95	91.616	ENSPPAG00000040143	EDC3	96	91.616	Pan_paniscus
ENSSHAG00000015075	EDC3	95	91.207	ENSPPRG00000006257	EDC3	96	91.207	Panthera_pardus
ENSSHAG00000015075	EDC3	95	91.207	ENSPTIG00000017424	EDC3	96	91.207	Panthera_tigris_altaica
ENSSHAG00000015075	EDC3	95	91.616	ENSPTRG00000007279	EDC3	96	91.616	Pan_troglodytes
ENSSHAG00000015075	EDC3	95	92.434	ENSPANG00000015997	EDC3	96	92.434	Papio_anubis
ENSSHAG00000015075	EDC3	95	65.580	ENSPKIG00000019810	EDC3	96	65.580	Paramormyrops_kingsleyae
ENSSHAG00000015075	EDC3	95	67.480	ENSPKIG00000004416	edc3	96	68.496	Paramormyrops_kingsleyae
ENSSHAG00000015075	EDC3	89	88.210	ENSPSIG00000008474	EDC3	94	88.210	Pelodiscus_sinensis
ENSSHAG00000015075	EDC3	95	66.735	ENSPMGG00000007223	edc3	96	66.735	Periophthalmus_magnuspinnatus
ENSSHAG00000015075	EDC3	95	91.207	ENSPEMG00000015260	Edc3	96	91.207	Peromyscus_maniculatus_bairdii
ENSSHAG00000015075	EDC3	95	96.715	ENSPCIG00000006276	EDC3	67	96.715	Phascolarctos_cinereus
ENSSHAG00000015075	EDC3	95	68.443	ENSPFOG00000012204	edc3	96	68.443	Poecilia_formosa
ENSSHAG00000015075	EDC3	95	68.443	ENSPLAG00000014420	edc3	96	68.443	Poecilia_latipinna
ENSSHAG00000015075	EDC3	95	68.443	ENSPMEG00000023289	edc3	96	68.443	Poecilia_mexicana
ENSSHAG00000015075	EDC3	95	68.443	ENSPREG00000016022	edc3	96	68.443	Poecilia_reticulata
ENSSHAG00000015075	EDC3	95	90.389	ENSPPYG00000006642	EDC3	96	90.389	Pongo_abelii
ENSSHAG00000015075	EDC3	83	98.148	ENSPCAG00000002802	EDC3	84	98.148	Procavia_capensis
ENSSHAG00000015075	EDC3	95	91.411	ENSPCOG00000013364	EDC3	96	91.411	Propithecus_coquereli
ENSSHAG00000015075	EDC3	95	90.798	ENSPVAG00000014733	EDC3	96	90.798	Pteropus_vampyrus
ENSSHAG00000015075	EDC3	95	67.008	ENSPNYG00000021797	edc3	96	67.008	Pundamilia_nyererei
ENSSHAG00000015075	EDC3	95	56.707	ENSPNYG00000009669	EDC3	96	56.301	Pundamilia_nyererei
ENSSHAG00000015075	EDC3	95	69.215	ENSPNAG00000019657	edc3	96	69.215	Pygocentrus_nattereri
ENSSHAG00000015075	EDC3	94	91.152	ENSRNOG00000019579	Edc3	96	91.770	Rattus_norvegicus
ENSSHAG00000015075	EDC3	95	92.229	ENSRBIG00000019488	EDC3	96	92.229	Rhinopithecus_bieti
ENSSHAG00000015075	EDC3	95	92.229	ENSRROG00000034959	EDC3	96	92.229	Rhinopithecus_roxellana
ENSSHAG00000015075	EDC3	95	91.616	ENSSBOG00000004896	EDC3	96	91.616	Saimiri_boliviensis_boliviensis
ENSSHAG00000015075	EDC3	77	82.090	ENSSFOG00015002439	edc3	96	64.909	Scleropages_formosus
ENSSHAG00000015075	EDC3	95	69.980	ENSSFOG00015016939	edc3	96	70.588	Scleropages_formosus
ENSSHAG00000015075	EDC3	98	54.921	ENSSMAG00000010176	-	99	54.921	Scophthalmus_maximus
ENSSHAG00000015075	EDC3	95	68.303	ENSSMAG00000010695	edc3	96	68.443	Scophthalmus_maximus
ENSSHAG00000015075	EDC3	98	57.564	ENSSDUG00000007671	EDC3	99	57.564	Seriola_dumerili
ENSSHAG00000015075	EDC3	95	68.238	ENSSDUG00000021844	edc3	96	68.852	Seriola_dumerili
ENSSHAG00000015075	EDC3	95	68.238	ENSSLDG00000022046	edc3	96	68.852	Seriola_lalandi_dorsalis
ENSSHAG00000015075	EDC3	76	92.140	ENSSARG00000003907	EDC3	77	92.140	Sorex_araneus
ENSSHAG00000015075	EDC3	95	90.184	ENSSPUG00000008232	EDC3	96	90.184	Sphenodon_punctatus
ENSSHAG00000015075	EDC3	95	69.262	ENSSPAG00000010009	edc3	96	69.262	Stegastes_partitus
ENSSHAG00000015075	EDC3	95	55.781	ENSSPAG00000020327	EDC3	96	55.781	Stegastes_partitus
ENSSHAG00000015075	EDC3	95	91.207	ENSSSCG00000001903	EDC3	96	91.207	Sus_scrofa
ENSSHAG00000015075	EDC3	95	90.349	ENSTGUG00000004007	EDC3	96	90.349	Taeniopygia_guttata
ENSSHAG00000015075	EDC3	95	69.057	ENSTRUG00000017078	edc3	96	69.057	Takifugu_rubripes
ENSSHAG00000015075	EDC3	95	68.571	ENSTNIG00000016047	edc3	96	68.571	Tetraodon_nigroviridis
ENSSHAG00000015075	EDC3	95	91.393	ENSTTRG00000007990	EDC3	96	91.393	Tursiops_truncatus
ENSSHAG00000015075	EDC3	95	91.002	ENSUAMG00000026710	-	96	91.002	Ursus_americanus
ENSSHAG00000015075	EDC3	95	91.002	ENSUMAG00000005006	EDC3	92	91.002	Ursus_maritimus
ENSSHAG00000015075	EDC3	74	85.185	ENSVPAG00000003499	-	75	85.185	Vicugna_pacos
ENSSHAG00000015075	EDC3	95	91.411	ENSVVUG00000018601	EDC3	96	91.411	Vulpes_vulpes
ENSSHAG00000015075	EDC3	64	82.371	ENSXETG00000010622	edc3	94	83.587	Xenopus_tropicalis
ENSSHAG00000015075	EDC3	95	68.238	ENSXMAG00000007377	edc3	96	68.238	Xiphophorus_maculatus