EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000015192 (Gene tree)
Gene ID: 100925885
Gene Symbol: PNLDC1
Alias: FLJ40240|dJ195P10.2
Full Name: PARN like%2C ribonuclease domain containing 1
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 20844 bases
Position: chrGL856967.1:1719025-1739868
Accession: 21185
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000017896	CAF1	PF04857.20	1.8e-76	1	1
ENSSHAP00000017897	CAF1	PF04857.20	7.5e-72	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000018045	PNLDC1-202	2779	-	ENSSHAP00000017897	521 (aa)	-	G3WR42
ENSSHAT00000018044	PNLDC1-201	2962	-	ENSSHAP00000017896	582 (aa)	-	G3WR41

Gene Model

Click here to download ENSSHAG00000015192's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000015192's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000015192	PNLDC1	99	76.163	ENSG00000146453	PNLDC1	99	76.163	Homo_sapiens
ENSSHAG00000015192	PNLDC1	95	76.861	ENSAMEG00000015371	PNLDC1	95	76.634	Ailuropoda_melanoleuca
ENSSHAG00000015192	PNLDC1	97	61.133	ENSAPLG00000007014	PNLDC1	97	61.133	Anas_platyrhynchos
ENSSHAG00000015192	PNLDC1	65	31.796	ENSACAG00000004973	PARN	61	31.068	Anolis_carolinensis
ENSSHAG00000015192	PNLDC1	98	61.328	ENSACAG00000013667	PNLDC1	96	61.328	Anolis_carolinensis
ENSSHAG00000015192	PNLDC1	97	75.644	ENSANAG00000034713	PNLDC1	95	75.770	Aotus_nancymaae
ENSSHAG00000015192	PNLDC1	97	77.075	ENSBTAG00000015166	PNLDC1	96	77.075	Bos_taurus
ENSSHAG00000015192	PNLDC1	97	75.644	ENSCJAG00000011865	PNLDC1	99	75.446	Callithrix_jacchus
ENSSHAG00000015192	PNLDC1	96	77.000	ENSCAFG00000000740	PNLDC1	96	76.772	Canis_familiaris
ENSSHAG00000015192	PNLDC1	96	75.150	ENSCAFG00020017742	PNLDC1	97	80.054	Canis_lupus_dingo
ENSSHAG00000015192	PNLDC1	98	75.195	ENSCHIG00000003141	PNLDC1	93	79.480	Capra_hircus
ENSSHAG00000015192	PNLDC1	97	74.803	ENSTSYG00000005606	PNLDC1	95	74.803	Carlito_syrichta
ENSSHAG00000015192	PNLDC1	99	48.116	ENSCAPG00000011893	PNLDC1	89	59.002	Cavia_aperea
ENSSHAG00000015192	PNLDC1	65	30.073	ENSCPOG00000002263	PARN	62	30.073	Cavia_porcellus
ENSSHAG00000015192	PNLDC1	97	71.542	ENSCPOG00000019565	PNLDC1	95	71.542	Cavia_porcellus
ENSSHAG00000015192	PNLDC1	97	75.197	ENSCCAG00000026232	PNLDC1	95	75.197	Cebus_capucinus
ENSSHAG00000015192	PNLDC1	97	76.634	ENSCATG00000033196	PNLDC1	95	76.634	Cercocebus_atys
ENSSHAG00000015192	PNLDC1	97	75.644	ENSCLAG00000003228	PNLDC1	95	75.644	Chinchilla_lanigera
ENSSHAG00000015192	PNLDC1	99	74.710	ENSCSAG00000012478	PNLDC1	99	74.710	Chlorocebus_sabaeus
ENSSHAG00000015192	PNLDC1	94	70.791	ENSCPBG00000004050	PNLDC1	96	70.791	Chrysemys_picta_bellii
ENSSHAG00000015192	PNLDC1	97	76.285	ENSCANG00000043076	PNLDC1	97	76.285	Colobus_angolensis_palliatus
ENSSHAG00000015192	PNLDC1	97	74.059	ENSCGRG00001007470	-	95	74.059	Cricetulus_griseus_chok1gshd
ENSSHAG00000015192	PNLDC1	67	30.024	ENSCGRG00001012096	Parn	63	30.024	Cricetulus_griseus_chok1gshd
ENSSHAG00000015192	PNLDC1	98	61.029	ENSCGRG00001011981	-	99	61.029	Cricetulus_griseus_chok1gshd
ENSSHAG00000015192	PNLDC1	98	61.029	ENSCGRG00000003103	-	99	61.029	Cricetulus_griseus_crigri
ENSSHAG00000015192	PNLDC1	67	30.024	ENSCGRG00000004939	Parn	63	30.024	Cricetulus_griseus_crigri
ENSSHAG00000015192	PNLDC1	97	74.059	ENSCGRG00000010221	-	95	74.059	Cricetulus_griseus_crigri
ENSSHAG00000015192	PNLDC1	97	76.621	ENSDNOG00000013709	PNLDC1	96	76.621	Dasypus_novemcinctus
ENSSHAG00000015192	PNLDC1	97	70.000	ENSDORG00000011517	Pnldc1	99	74.760	Dipodomys_ordii
ENSSHAG00000015192	PNLDC1	93	68.994	ENSETEG00000007587	PNLDC1	98	68.994	Echinops_telfairi
ENSSHAG00000015192	PNLDC1	94	30.754	ENSEBUG00000008118	PNLDC1	93	30.754	Eptatretus_burgeri
ENSSHAG00000015192	PNLDC1	97	69.844	ENSEASG00005019029	PNLDC1	96	69.844	Equus_asinus_asinus
ENSSHAG00000015192	PNLDC1	97	77.165	ENSECAG00000012898	PNLDC1	96	77.165	Equus_caballus
ENSSHAG00000015192	PNLDC1	69	65.625	ENSEEUG00000005717	-	86	65.625	Erinaceus_europaeus
ENSSHAG00000015192	PNLDC1	97	76.772	ENSFCAG00000002848	PNLDC1	96	76.772	Felis_catus
ENSSHAG00000015192	PNLDC1	65	30.318	ENSFCAG00000044961	PARN	62	30.318	Felis_catus
ENSSHAG00000015192	PNLDC1	96	60.947	ENSFALG00000012081	PNLDC1	99	60.947	Ficedula_albicollis
ENSSHAG00000015192	PNLDC1	97	75.050	ENSFDAG00000021334	PNLDC1	95	75.050	Fukomys_damarensis
ENSSHAG00000015192	PNLDC1	76	62.217	ENSGALG00000011624	PNLDC1	77	62.217	Gallus_gallus
ENSSHAG00000015192	PNLDC1	98	71.037	ENSGAGG00000015276	PNLDC1	100	71.694	Gopherus_agassizii
ENSSHAG00000015192	PNLDC1	97	76.378	ENSGGOG00000014077	PNLDC1	95	76.378	Gorilla_gorilla
ENSSHAG00000015192	PNLDC1	97	75.842	ENSHGLG00000006889	PNLDC1	95	75.842	Heterocephalus_glaber_female
ENSSHAG00000015192	PNLDC1	97	75.842	ENSHGLG00100018275	PNLDC1	95	75.842	Heterocephalus_glaber_male
ENSSHAG00000015192	PNLDC1	97	76.923	ENSSTOG00000005595	PNLDC1	95	76.923	Ictidomys_tridecemlineatus
ENSSHAG00000015192	PNLDC1	98	69.863	ENSJJAG00000009937	Pnldc1	96	69.863	Jaculus_jaculus
ENSSHAG00000015192	PNLDC1	65	30.221	ENSLBEG00000009167	parn	62	30.221	Labrus_bergylta
ENSSHAG00000015192	PNLDC1	56	75.601	ENSLAFG00000030189	PNLDC1	92	74.286	Loxodonta_africana
ENSSHAG00000015192	PNLDC1	97	76.634	ENSMFAG00000041296	PNLDC1	95	76.634	Macaca_fascicularis
ENSSHAG00000015192	PNLDC1	97	76.634	ENSMMUG00000004181	PNLDC1	97	74.903	Macaca_mulatta
ENSSHAG00000015192	PNLDC1	97	76.634	ENSMNEG00000034271	PNLDC1	95	76.634	Macaca_nemestrina
ENSSHAG00000015192	PNLDC1	97	73.663	ENSMLEG00000044059	PNLDC1	95	73.663	Mandrillus_leucophaeus
ENSSHAG00000015192	PNLDC1	97	61.493	ENSMGAG00000012470	PNLDC1	97	61.493	Meleagris_gallopavo
ENSSHAG00000015192	PNLDC1	96	61.462	ENSMAUG00000012298	Pnldc1	95	61.462	Mesocricetus_auratus
ENSSHAG00000015192	PNLDC1	97	77.624	ENSMICG00000008021	PNLDC1	95	77.624	Microcebus_murinus
ENSSHAG00000015192	PNLDC1	98	75.342	ENSMOCG00000014287	Pnldc1	96	75.342	Microtus_ochrogaster
ENSSHAG00000015192	PNLDC1	98	96.457	ENSMODG00000007420	PNLDC1	95	96.457	Monodelphis_domestica
ENSSHAG00000015192	PNLDC1	97	76.726	MGP_CAROLIEiJ_G0021045	Pnldc1	95	76.726	Mus_caroli
ENSSHAG00000015192	PNLDC1	97	76.923	ENSMUSG00000073460	Pnldc1	100	76.508	Mus_musculus
ENSSHAG00000015192	PNLDC1	98	76.621	MGP_PahariEiJ_G0023361	Pnldc1	96	76.621	Mus_pahari
ENSSHAG00000015192	PNLDC1	97	76.529	MGP_SPRETEiJ_G0021975	Pnldc1	95	76.529	Mus_spretus
ENSSHAG00000015192	PNLDC1	96	77.200	ENSMPUG00000004920	PNLDC1	96	76.969	Mustela_putorius_furo
ENSSHAG00000015192	PNLDC1	97	76.726	ENSMLUG00000000747	PNLDC1	95	76.726	Myotis_lucifugus
ENSSHAG00000015192	PNLDC1	65	30.097	ENSMLUG00000005414	PARN	81	30.097	Myotis_lucifugus
ENSSHAG00000015192	PNLDC1	98	76.817	ENSNGAG00000017714	Pnldc1	96	76.817	Nannospalax_galili
ENSSHAG00000015192	PNLDC1	97	75.639	ENSNLEG00000011282	PNLDC1	97	75.639	Nomascus_leucogenys
ENSSHAG00000015192	PNLDC1	62	84.348	ENSMEUG00000011926	-	73	84.348	Notamacropus_eugenii
ENSSHAG00000015192	PNLDC1	55	81.597	ENSMEUG00000014042	-	100	81.597	Notamacropus_eugenii
ENSSHAG00000015192	PNLDC1	80	66.588	ENSOPRG00000003813	PNLDC1	70	74.799	Ochotona_princeps
ENSSHAG00000015192	PNLDC1	97	75.050	ENSODEG00000008047	PNLDC1	95	75.050	Octodon_degus
ENSSHAG00000015192	PNLDC1	96	61.829	ENSOANG00000012199	PNLDC1	95	62.376	Ornithorhynchus_anatinus
ENSSHAG00000015192	PNLDC1	97	75.000	ENSOCUG00000013867	PNLDC1	96	75.000	Oryctolagus_cuniculus
ENSSHAG00000015192	PNLDC1	98	77.059	ENSOGAG00000007331	PNLDC1	96	77.059	Otolemur_garnettii
ENSSHAG00000015192	PNLDC1	98	75.686	ENSOARG00000004585	PNLDC1	96	75.686	Ovis_aries
ENSSHAG00000015192	PNLDC1	97	76.378	ENSPPAG00000026651	PNLDC1	95	76.378	Pan_paniscus
ENSSHAG00000015192	PNLDC1	97	77.165	ENSPPRG00000012854	PNLDC1	96	77.165	Panthera_pardus
ENSSHAG00000015192	PNLDC1	98	74.460	ENSPTIG00000011501	PNLDC1	96	74.460	Panthera_tigris_altaica
ENSSHAG00000015192	PNLDC1	65	30.318	ENSPTIG00000012135	PARN	62	30.318	Panthera_tigris_altaica
ENSSHAG00000015192	PNLDC1	99	75.145	ENSPTRG00000018762	PNLDC1	99	75.145	Pan_troglodytes
ENSSHAG00000015192	PNLDC1	97	76.634	ENSPANG00000022009	PNLDC1	95	76.634	Papio_anubis
ENSSHAG00000015192	PNLDC1	50	70.656	ENSPSIG00000011419	PNLDC1	86	70.656	Pelodiscus_sinensis
ENSSHAG00000015192	PNLDC1	65	30.508	ENSPSIG00000014804	PARN	62	30.918	Pelodiscus_sinensis
ENSSHAG00000015192	PNLDC1	97	76.529	ENSPEMG00000016301	Pnldc1	95	76.529	Peromyscus_maniculatus_bairdii
ENSSHAG00000015192	PNLDC1	67	30.476	ENSPEMG00000018439	Parn	63	30.024	Peromyscus_maniculatus_bairdii
ENSSHAG00000015192	PNLDC1	65	30.170	ENSPMAG00000003956	parn	76	30.170	Petromyzon_marinus
ENSSHAG00000015192	PNLDC1	84	97.489	ENSPCIG00000023412	PNLDC1	100	97.489	Phascolarctos_cinereus
ENSSHAG00000015192	PNLDC1	97	69.591	ENSPPYG00000017148	PNLDC1	95	69.591	Pongo_abelii
ENSSHAG00000015192	PNLDC1	97	67.126	ENSPCAG00000014169	PNLDC1	96	67.126	Procavia_capensis
ENSSHAG00000015192	PNLDC1	97	78.020	ENSPCOG00000025722	PNLDC1	95	78.020	Propithecus_coquereli
ENSSHAG00000015192	PNLDC1	70	81.319	ENSPVAG00000005325	PNLDC1	72	81.201	Pteropus_vampyrus
ENSSHAG00000015192	PNLDC1	68	30.208	ENSPVAG00000002547	PARN	62	30.100	Pteropus_vampyrus
ENSSHAG00000015192	PNLDC1	97	77.075	ENSRNOG00000023140	Pnldc1	99	74.843	Rattus_norvegicus
ENSSHAG00000015192	PNLDC1	96	76.938	ENSRBIG00000033806	PNLDC1	95	76.938	Rhinopithecus_bieti
ENSSHAG00000015192	PNLDC1	97	76.680	ENSRROG00000043919	PNLDC1	97	76.680	Rhinopithecus_roxellana
ENSSHAG00000015192	PNLDC1	97	76.436	ENSSBOG00000019135	PNLDC1	95	76.436	Saimiri_boliviensis_boliviensis
ENSSHAG00000015192	PNLDC1	65	30.097	ENSSPUG00000007719	PARN	62	30.266	Sphenodon_punctatus
ENSSHAG00000015192	PNLDC1	55	71.329	ENSSPUG00000004627	PNLDC1	100	69.912	Sphenodon_punctatus
ENSSHAG00000015192	PNLDC1	97	75.787	ENSSSCG00000004046	PNLDC1	99	75.787	Sus_scrofa
ENSSHAG00000015192	PNLDC1	93	62.168	ENSTGUG00000011418	PNLDC1	100	62.168	Taeniopygia_guttata
ENSSHAG00000015192	PNLDC1	65	30.318	ENSTNIG00000008252	parn	63	30.318	Tetraodon_nigroviridis
ENSSHAG00000015192	PNLDC1	99	65.637	ENSTBEG00000009131	PNLDC1	99	65.637	Tupaia_belangeri
ENSSHAG00000015192	PNLDC1	70	74.387	ENSTTRG00000010409	PNLDC1	73	74.611	Tursiops_truncatus
ENSSHAG00000015192	PNLDC1	96	65.286	ENSUAMG00000015783	PNLDC1	96	65.243	Ursus_americanus
ENSSHAG00000015192	PNLDC1	65	30.073	ENSUMAG00000004527	PARN	62	30.073	Ursus_maritimus
ENSSHAG00000015192	PNLDC1	94	70.800	ENSUMAG00000011903	PNLDC1	99	70.669	Ursus_maritimus
ENSSHAG00000015192	PNLDC1	65	30.318	ENSVVUG00000019509	PARN	62	30.318	Vulpes_vulpes
ENSSHAG00000015192	PNLDC1	94	77.642	ENSVVUG00000006586	PNLDC1	98	77.847	Vulpes_vulpes