EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000015214 (Gene tree)
Gene ID: 100922052
Gene Symbol: ARID4B
Alias: BCAA|BRCAA1|RBP1L1|SAP180
Full Name: AT-rich interaction domain 4B
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 184693 bases
Position: chrGL856802.1:1724511-1909203
Accession: 100922052
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000017924	Tudor-knot	PF11717.8	1.2e-11	1	1
ENSSHAP00000017923	Tudor-knot	PF11717.8	1.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000018071	ARID4B-201	4231	-	ENSSHAP00000017923	1315 (aa)	-	G3WR68
ENSSHAT00000018072	ARID4B-202	3607	XM_012547953	ENSSHAP00000017924	1107 (aa)	XP_012403407	G3WR69

Gene Model

Click here to download ENSSHAG00000015214's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000015214's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000015214	ARID4B	62	54.266	ENSSHAG00000018032	ARID4A	56	53.706

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000015214	ARID4B	100	86.798	ENSG00000054267	ARID4B	100	92.340	Homo_sapiens
ENSSHAG00000015214	ARID4B	99	51.375	ENSAPOG00000010823	tomm20a	53	60.782	Acanthochromis_polyacanthus
ENSSHAG00000015214	ARID4B	99	84.079	ENSAMEG00000008801	ARID4B	100	83.776	Ailuropoda_melanoleuca
ENSSHAG00000015214	ARID4B	99	51.988	ENSAOCG00000003330	tomm20a	100	50.746	Amphiprion_ocellaris
ENSSHAG00000015214	ARID4B	99	51.841	ENSAPEG00000024018	tomm20a	100	50.674	Amphiprion_percula
ENSSHAG00000015214	ARID4B	99	51.320	ENSATEG00000014930	tomm20a	54	59.413	Anabas_testudineus
ENSSHAG00000015214	ARID4B	100	79.279	ENSAPLG00000004422	ARID4B	100	78.813	Anas_platyrhynchos
ENSSHAG00000015214	ARID4B	99	74.603	ENSACAG00000001289	ARID4B	100	74.301	Anolis_carolinensis
ENSSHAG00000015214	ARID4B	100	85.444	ENSANAG00000038088	ARID4B	100	84.913	Aotus_nancymaae
ENSSHAG00000015214	ARID4B	89	63.855	ENSACLG00000023521	tomm20a	98	63.855	Astatotilapia_calliptera
ENSSHAG00000015214	ARID4B	72	89.333	ENSAMXG00000003657	tomm20a	87	66.511	Astyanax_mexicanus
ENSSHAG00000015214	ARID4B	100	83.788	ENSBTAG00000000222	ARID4B	100	83.333	Bos_taurus
ENSSHAG00000015214	ARID4B	100	85.205	ENSCJAG00000018055	ARID4B	100	84.446	Callithrix_jacchus
ENSSHAG00000015214	ARID4B	100	84.697	ENSCAFG00000011439	ARID4B	100	84.167	Canis_familiaris
ENSSHAG00000015214	ARID4B	99	84.375	ENSCAFG00020027130	ARID4B	99	83.841	Canis_lupus_dingo
ENSSHAG00000015214	ARID4B	99	81.721	ENSCHIG00000020742	ARID4B	100	81.036	Capra_hircus
ENSSHAG00000015214	ARID4B	100	85.974	ENSTSYG00000010028	ARID4B	100	84.837	Carlito_syrichta
ENSSHAG00000015214	ARID4B	99	82.032	ENSCPOG00000034766	ARID4B	100	82.108	Cavia_porcellus
ENSSHAG00000015214	ARID4B	100	85.368	ENSCCAG00000021520	ARID4B	100	84.761	Cebus_capucinus
ENSSHAG00000015214	ARID4B	100	86.050	ENSCATG00000042166	ARID4B	100	85.292	Cercocebus_atys
ENSSHAG00000015214	ARID4B	100	84.621	ENSCLAG00000003255	ARID4B	100	83.712	Chinchilla_lanigera
ENSSHAG00000015214	ARID4B	100	86.202	ENSCSAG00000010069	ARID4B	100	85.368	Chlorocebus_sabaeus
ENSSHAG00000015214	ARID4B	74	100.000	ENSCHOG00000001152	ARID4B	67	100.000	Choloepus_hoffmanni
ENSSHAG00000015214	ARID4B	100	79.383	ENSCPBG00000004501	ARID4B	99	82.580	Chrysemys_picta_bellii
ENSSHAG00000015214	ARID4B	100	82.866	ENSCANG00000027498	ARID4B	99	95.968	Colobus_angolensis_palliatus
ENSSHAG00000015214	ARID4B	100	83.333	ENSCGRG00001014397	Arid4b	100	82.500	Cricetulus_griseus_chok1gshd
ENSSHAG00000015214	ARID4B	99	83.308	ENSCGRG00000004910	Arid4b	100	82.473	Cricetulus_griseus_crigri
ENSSHAG00000015214	ARID4B	93	52.521	ENSCVAG00000003244	tomm20a	54	60.705	Cyprinodon_variegatus
ENSSHAG00000015214	ARID4B	100	50.111	ENSDARG00000090656	tomm20a	100	51.282	Danio_rerio
ENSSHAG00000015214	ARID4B	56	83.490	ENSDNOG00000005711	ARID4B	100	82.550	Dasypus_novemcinctus
ENSSHAG00000015214	ARID4B	99	83.927	ENSDORG00000006422	Arid4b	100	83.397	Dipodomys_ordii
ENSSHAG00000015214	ARID4B	89	82.800	ENSETEG00000005596	ARID4B	93	81.600	Echinops_telfairi
ENSSHAG00000015214	ARID4B	99	83.599	ENSEASG00005000677	ARID4B	99	84.131	Equus_asinus_asinus
ENSSHAG00000015214	ARID4B	99	85.042	ENSECAG00000017836	ARID4B	99	85.194	Equus_caballus
ENSSHAG00000015214	ARID4B	83	97.222	ENSEEUG00000005378	ARID4B	86	97.222	Erinaceus_europaeus
ENSSHAG00000015214	ARID4B	100	83.712	ENSFCAG00000030096	ARID4B	100	83.561	Felis_catus
ENSSHAG00000015214	ARID4B	100	79.910	ENSFALG00000013548	ARID4B	98	79.684	Ficedula_albicollis
ENSSHAG00000015214	ARID4B	99	84.814	ENSFDAG00000014194	ARID4B	100	83.523	Fukomys_damarensis
ENSSHAG00000015214	ARID4B	99	51.170	ENSFHEG00000003798	tomm20a	54	59.511	Fundulus_heteroclitus
ENSSHAG00000015214	ARID4B	90	53.306	ENSGMOG00000018747	tomm20a	92	51.728	Gadus_morhua
ENSSHAG00000015214	ARID4B	100	77.427	ENSGAGG00000020544	ARID4B	98	81.649	Gopherus_agassizii
ENSSHAG00000015214	ARID4B	100	86.277	ENSGGOG00000022080	ARID4B	100	85.444	Gorilla_gorilla
ENSSHAG00000015214	ARID4B	99	51.369	ENSHBUG00000020369	tomm20a	53	59.569	Haplochromis_burtoni
ENSSHAG00000015214	ARID4B	100	84.848	ENSHGLG00000012546	ARID4B	100	83.939	Heterocephalus_glaber_female
ENSSHAG00000015214	ARID4B	100	84.848	ENSHGLG00100015436	ARID4B	100	83.939	Heterocephalus_glaber_male
ENSSHAG00000015214	ARID4B	91	72.488	ENSHCOG00000010376	tomm20a	50	72.837	Hippocampus_comes
ENSSHAG00000015214	ARID4B	100	49.891	ENSIPUG00000014234	arid4b	54	57.895	Ictalurus_punctatus
ENSSHAG00000015214	ARID4B	100	84.848	ENSSTOG00000002810	ARID4B	100	84.318	Ictidomys_tridecemlineatus
ENSSHAG00000015214	ARID4B	100	81.061	ENSJJAG00000021368	Arid4b	100	80.303	Jaculus_jaculus
ENSSHAG00000015214	ARID4B	88	52.311	ENSKMAG00000010987	tomm20a	73	73.600	Kryptolebias_marmoratus
ENSSHAG00000015214	ARID4B	91	76.066	ENSLOCG00000015899	tomm20a	100	54.036	Lepisosteus_oculatus
ENSSHAG00000015214	ARID4B	99	85.281	ENSLAFG00000014295	ARID4B	100	85.053	Loxodonta_africana
ENSSHAG00000015214	ARID4B	100	86.202	ENSMFAG00000044016	ARID4B	100	85.368	Macaca_fascicularis
ENSSHAG00000015214	ARID4B	100	86.202	ENSMMUG00000007141	ARID4B	100	85.368	Macaca_mulatta
ENSSHAG00000015214	ARID4B	100	85.974	ENSMNEG00000014840	ARID4B	100	85.368	Macaca_nemestrina
ENSSHAG00000015214	ARID4B	99	86.128	ENSMLEG00000033583	ARID4B	100	85.442	Mandrillus_leucophaeus
ENSSHAG00000015214	ARID4B	99	51.297	ENSMZEG00005009879	tomm20a	53	59.434	Maylandia_zebra
ENSSHAG00000015214	ARID4B	100	80.526	ENSMGAG00000011896	ARID4B	100	80.075	Meleagris_gallopavo
ENSSHAG00000015214	ARID4B	100	86.732	ENSMICG00000016358	ARID4B	100	86.353	Microcebus_murinus
ENSSHAG00000015214	ARID4B	100	95.894	ENSMODG00000008417	ARID4B	100	95.894	Monodelphis_domestica
ENSSHAG00000015214	ARID4B	99	51.684	ENSMALG00000005205	tomm20a	53	59.811	Monopterus_albus
ENSSHAG00000015214	ARID4B	100	82.500	MGP_CAROLIEiJ_G0018236	Arid4b	100	82.121	Mus_caroli
ENSSHAG00000015214	ARID4B	100	81.818	ENSMUSG00000039219	Arid4b	100	81.439	Mus_musculus
ENSSHAG00000015214	ARID4B	100	82.727	MGP_PahariEiJ_G0019286	Arid4b	100	82.348	Mus_pahari
ENSSHAG00000015214	ARID4B	100	81.742	MGP_SPRETEiJ_G0019094	Arid4b	100	81.364	Mus_spretus
ENSSHAG00000015214	ARID4B	100	83.939	ENSMPUG00000002906	ARID4B	100	83.712	Mustela_putorius_furo
ENSSHAG00000015214	ARID4B	99	82.652	ENSMLUG00000016232	ARID4B	100	82.424	Myotis_lucifugus
ENSSHAG00000015214	ARID4B	100	81.962	ENSNGAG00000014629	Arid4b	100	81.283	Nannospalax_galili
ENSSHAG00000015214	ARID4B	89	73.077	ENSNBRG00000019684	tomm20a	98	73.077	Neolamprologus_brichardi
ENSSHAG00000015214	ARID4B	100	86.050	ENSNLEG00000002665	ARID4B	100	85.368	Nomascus_leucogenys
ENSSHAG00000015214	ARID4B	100	84.545	ENSODEG00000005373	ARID4B	100	83.636	Octodon_degus
ENSSHAG00000015214	ARID4B	99	86.105	ENSOCUG00000006605	ARID4B	100	85.118	Oryctolagus_cuniculus
ENSSHAG00000015214	ARID4B	100	51.662	ENSORLG00000012510	tomm20a	100	50.540	Oryzias_latipes
ENSSHAG00000015214	ARID4B	89	74.580	ENSORLG00020013988	tomm20a	99	74.279	Oryzias_latipes_hni
ENSSHAG00000015214	ARID4B	89	75.181	ENSORLG00015022835	tomm20a	72	74.879	Oryzias_latipes_hsok
ENSSHAG00000015214	ARID4B	100	51.916	ENSOMEG00000000521	tomm20a	54	59.918	Oryzias_melastigma
ENSSHAG00000015214	ARID4B	99	78.354	ENSOGAG00000012476	ARID4B	100	77.563	Otolemur_garnettii
ENSSHAG00000015214	ARID4B	99	82.967	ENSOARG00000003481	ARID4B	98	82.589	Ovis_aries
ENSSHAG00000015214	ARID4B	100	86.277	ENSPPAG00000031651	ARID4B	100	85.292	Pan_paniscus
ENSSHAG00000015214	ARID4B	100	84.242	ENSPPRG00000013739	ARID4B	100	83.712	Panthera_pardus
ENSSHAG00000015214	ARID4B	100	82.727	ENSPTIG00000012520	ARID4B	100	82.197	Panthera_tigris_altaica
ENSSHAG00000015214	ARID4B	100	86.429	ENSPTRG00000002129	ARID4B	100	85.444	Pan_troglodytes
ENSSHAG00000015214	ARID4B	85	84.677	ENSPTRG00000048786	-	95	83.602	Pan_troglodytes
ENSSHAG00000015214	ARID4B	99	85.573	ENSPANG00000013611	ARID4B	100	84.890	Papio_anubis
ENSSHAG00000015214	ARID4B	93	79.032	ENSPSIG00000011632	ARID4B	99	78.790	Pelodiscus_sinensis
ENSSHAG00000015214	ARID4B	100	95.513	ENSPCIG00000029756	ARID4B	100	95.513	Phascolarctos_cinereus
ENSSHAG00000015214	ARID4B	99	50.970	ENSPFOG00000019430	tomm20a	79	51.476	Poecilia_formosa
ENSSHAG00000015214	ARID4B	99	51.010	ENSPLAG00000010554	tomm20a	100	50.473	Poecilia_latipinna
ENSSHAG00000015214	ARID4B	99	49.530	ENSPMEG00000003093	tomm20a	51	43.958	Poecilia_mexicana
ENSSHAG00000015214	ARID4B	99	50.996	ENSPREG00000007996	tomm20a	100	50.838	Poecilia_reticulata
ENSSHAG00000015214	ARID4B	100	86.202	ENSPPYG00000000098	ARID4B	100	85.216	Pongo_abelii
ENSSHAG00000015214	ARID4B	100	86.429	ENSPCOG00000024328	ARID4B	100	85.444	Propithecus_coquereli
ENSSHAG00000015214	ARID4B	100	81.046	ENSPVAG00000015159	ARID4B	100	80.591	Pteropus_vampyrus
ENSSHAG00000015214	ARID4B	99	49.890	ENSPNYG00000013988	tomm20a	75	49.906	Pundamilia_nyererei
ENSSHAG00000015214	ARID4B	87	80.503	ENSRNOG00000016391	LOC100912163	97	79.636	Rattus_norvegicus
ENSSHAG00000015214	ARID4B	99	78.740	ENSRBIG00000042029	ARID4B	100	78.740	Rhinopithecus_bieti
ENSSHAG00000015214	ARID4B	100	86.050	ENSRROG00000045203	ARID4B	100	85.216	Rhinopithecus_roxellana
ENSSHAG00000015214	ARID4B	83	83.668	ENSSBOG00000020196	ARID4B	100	82.938	Saimiri_boliviensis_boliviensis
ENSSHAG00000015214	ARID4B	100	50.256	ENSSFOG00015000132	arid4b	57	55.654	Scleropages_formosus
ENSSHAG00000015214	ARID4B	99	50.035	ENSSMAG00000010430	tomm20a	100	49.646	Scophthalmus_maximus
ENSSHAG00000015214	ARID4B	99	51.629	ENSSDUG00000003019	tomm20a	53	61.066	Seriola_dumerili
ENSSHAG00000015214	ARID4B	100	77.368	ENSSPUG00000015466	ARID4B	98	77.368	Sphenodon_punctatus
ENSSHAG00000015214	ARID4B	99	50.976	ENSSPAG00000007358	tomm20a	53	60.569	Stegastes_partitus
ENSSHAG00000015214	ARID4B	100	84.470	ENSSSCG00000010156	ARID4B	100	84.015	Sus_scrofa
ENSSHAG00000015214	ARID4B	100	80.182	ENSTGUG00000010246	ARID4B	100	79.743	Taeniopygia_guttata
ENSSHAG00000015214	ARID4B	56	45.823	ENSTRUG00000002893	tomm20a	86	44.118	Takifugu_rubripes
ENSSHAG00000015214	ARID4B	79	82.328	ENSTBEG00000003961	ARID4B	80	80.819	Tupaia_belangeri
ENSSHAG00000015214	ARID4B	100	84.382	ENSTTRG00000002228	ARID4B	100	83.169	Tursiops_truncatus
ENSSHAG00000015214	ARID4B	99	83.269	ENSUMAG00000006905	ARID4B	100	82.719	Ursus_maritimus
ENSSHAG00000015214	ARID4B	69	88.119	ENSVPAG00000006841	ARID4B	69	85.112	Vicugna_pacos
ENSSHAG00000015214	ARID4B	99	83.730	ENSVVUG00000008154	ARID4B	99	83.116	Vulpes_vulpes
ENSSHAG00000015214	ARID4B	99	51.263	ENSXMAG00000006538	tomm20a	54	61.126	Xiphophorus_maculatus