EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000015279 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 1211 bases
Position: chrGL834662.1:1744073-1745283
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000017996	GTP_EFTU	PF00009.27	7.2e-08	1	1
ENSSHAP00000017996	GTP_EFTU_D3	PF03143.17	2.2e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000018145	-	1050	-	ENSSHAP00000017996	349 (aa)	-	G3WRE1

Gene Model

Click here to download ENSSHAG00000015279's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000015279's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000015279	-	100	47.849	ENSSHAG00000001743	-	82	47.849
ENSSHAG00000015279	-	93	30.682	ENSSHAG00000002700	-	58	30.286
ENSSHAG00000015279	-	100	61.299	ENSSHAG00000004864	-	82	61.299
ENSSHAG00000015279	-	93	30.857	ENSSHAG00000005908	-	67	30.508
ENSSHAG00000015279	-	100	54.026	ENSSHAG00000018414	-	82	54.026

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000015279	-	95	40.525	ENSAMEG00000009199	-	77	40.525	Ailuropoda_melanoleuca
ENSSHAG00000015279	-	99	41.848	ENSAMEG00000007333	-	81	41.848	Ailuropoda_melanoleuca
ENSSHAG00000015279	-	50	53.804	ENSAMEG00000003526	-	97	53.804	Ailuropoda_melanoleuca
ENSSHAG00000015279	-	61	57.826	ENSAMEG00000003518	-	94	57.826	Ailuropoda_melanoleuca
ENSSHAG00000015279	-	100	48.794	ENSCAFG00000029731	-	79	48.794	Canis_familiaris
ENSSHAG00000015279	-	100	58.377	ENSCAFG00000014227	-	81	58.377	Canis_familiaris
ENSSHAG00000015279	-	100	56.986	ENSCAFG00000008655	-	81	56.986	Canis_familiaris
ENSSHAG00000015279	-	70	44.891	ENSCAFG00000009697	-	77	44.891	Canis_familiaris
ENSSHAG00000015279	-	73	46.667	ENSCAFG00000002934	-	99	46.667	Canis_familiaris
ENSSHAG00000015279	-	99	47.244	ENSCAFG00000024478	-	98	54.787	Canis_familiaris
ENSSHAG00000015279	-	93	46.041	ENSDNOG00000036688	-	76	46.041	Dasypus_novemcinctus
ENSSHAG00000015279	-	69	47.368	ENSDNOG00000046924	-	97	47.368	Dasypus_novemcinctus
ENSSHAG00000015279	-	96	43.266	ENSDNOG00000036941	-	88	43.820	Dasypus_novemcinctus
ENSSHAG00000015279	-	100	42.708	ENSDNOG00000040076	-	81	42.708	Dasypus_novemcinctus
ENSSHAG00000015279	-	95	44.865	ENSDNOG00000043951	-	79	44.865	Dasypus_novemcinctus
ENSSHAG00000015279	-	86	46.154	ENSMPUG00000011817	-	99	47.077	Mustela_putorius_furo
ENSSHAG00000015279	-	97	42.359	ENSMPUG00000010722	-	82	42.359	Mustela_putorius_furo
ENSSHAG00000015279	-	100	48.958	ENSMPUG00000000302	-	88	48.958	Mustela_putorius_furo
ENSSHAG00000015279	-	99	43.008	ENSMPUG00000006981	-	81	43.008	Mustela_putorius_furo
ENSSHAG00000015279	-	84	49.524	ENSMLUG00000023141	-	98	49.524	Myotis_lucifugus
ENSSHAG00000015279	-	93	40.625	ENSOCUG00000007020	-	76	40.625	Oryctolagus_cuniculus
ENSSHAG00000015279	-	94	40.169	ENSOCUG00000026580	-	88	40.169	Oryctolagus_cuniculus
ENSSHAG00000015279	-	99	40.800	ENSOARG00000009283	-	81	40.800	Ovis_aries