EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000015335 (Gene tree)
Gene ID: 100923135
Gene Symbol: RBM12B
Alias: -
Full Name: RNA binding motif protein 12B
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 2238 bases
Position: chrGL841366.1:1759531-1761768
Accession: 100923135
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000018063	RRM_1	PF00076.22	1.7e-32	1	3
ENSSHAP00000018063	RRM_1	PF00076.22	1.7e-32	2	3
ENSSHAP00000018063	RRM_1	PF00076.22	1.7e-32	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000018212	RBM12B-201	2238	-	ENSSHAP00000018063	745 (aa)	XP_003760295	G3WRK8

Gene Model

Click here to download ENSSHAG00000015335's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000015335's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000015335	RBM12B	74	62.602	ENSSHAG00000018585	RBM12	77	71.134
ENSSHAG00000015335	RBM12B	53	33.784	ENSSHAG00000000063	-	98	33.784

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000015335	RBM12B	100	67.826	ENSG00000183808	RBM12B	100	90.244	Homo_sapiens
ENSSHAG00000015335	RBM12B	86	42.043	ENSAPOG00000013963	rbm12b	95	41.847	Acanthochromis_polyacanthus
ENSSHAG00000015335	RBM12B	100	61.547	ENSAMEG00000007134	RBM12B	100	60.417	Ailuropoda_melanoleuca
ENSSHAG00000015335	RBM12B	60	55.556	ENSACIG00000014943	rbm12b	99	45.317	Amphilophus_citrinellus
ENSSHAG00000015335	RBM12B	66	30.709	ENSACIG00000013317	zgc:153215	99	30.648	Amphilophus_citrinellus
ENSSHAG00000015335	RBM12B	67	30.000	ENSAOCG00000010819	zgc:153215	98	30.174	Amphiprion_ocellaris
ENSSHAG00000015335	RBM12B	100	37.533	ENSAOCG00000024270	rbm12b	100	37.931	Amphiprion_ocellaris
ENSSHAG00000015335	RBM12B	86	47.410	ENSAPEG00000022079	rbm12b	99	44.611	Amphiprion_percula
ENSSHAG00000015335	RBM12B	56	50.617	ENSATEG00000001886	zgc:153215	78	47.253	Anabas_testudineus
ENSSHAG00000015335	RBM12B	77	46.123	ENSATEG00000004578	rbm12b	98	46.123	Anabas_testudineus
ENSSHAG00000015335	RBM12B	100	61.792	ENSAPLG00000002020	RBM12B	100	62.319	Anas_platyrhynchos
ENSSHAG00000015335	RBM12B	94	50.089	ENSACAG00000003463	RBM12B	67	50.089	Anolis_carolinensis
ENSSHAG00000015335	RBM12B	100	62.674	ENSANAG00000034015	RBM12B	98	67.085	Aotus_nancymaae
ENSSHAG00000015335	RBM12B	78	44.156	ENSACLG00000005578	rbm12b	100	44.156	Astatotilapia_calliptera
ENSSHAG00000015335	RBM12B	78	44.156	ENSACLG00000005575	rbm12b	84	44.156	Astatotilapia_calliptera
ENSSHAG00000015335	RBM12B	59	52.083	ENSAMXG00000020853	zgc:153215	72	52.083	Astyanax_mexicanus
ENSSHAG00000015335	RBM12B	100	35.686	ENSAMXG00000041973	rbm12b	100	36.485	Astyanax_mexicanus
ENSSHAG00000015335	RBM12B	100	66.154	ENSBTAG00000013408	RBM12B	100	58.890	Bos_taurus
ENSSHAG00000015335	RBM12B	100	65.331	ENSCAFG00000009109	RBM12B	96	66.351	Canis_familiaris
ENSSHAG00000015335	RBM12B	100	58.315	ENSCAFG00020012203	RBM12B	96	66.667	Canis_lupus_dingo
ENSSHAG00000015335	RBM12B	85	66.822	ENSCHIG00000006790	RBM12B	87	65.736	Capra_hircus
ENSSHAG00000015335	RBM12B	100	65.126	ENSTSYG00000012515	RBM12B	100	65.126	Carlito_syrichta
ENSSHAG00000015335	RBM12B	100	66.957	ENSCAPG00000003543	RBM12B	98	66.957	Cavia_aperea
ENSSHAG00000015335	RBM12B	100	66.957	ENSCPOG00000007815	RBM12B	98	66.957	Cavia_porcellus
ENSSHAG00000015335	RBM12B	100	67.391	ENSCATG00000030769	RBM12B	100	67.391	Cercocebus_atys
ENSSHAG00000015335	RBM12B	100	66.522	ENSCLAG00000017617	RBM12B	100	66.522	Chinchilla_lanigera
ENSSHAG00000015335	RBM12B	100	67.457	ENSCSAG00000018559	RBM12B	93	67.826	Chlorocebus_sabaeus
ENSSHAG00000015335	RBM12B	98	64.565	ENSCHOG00000008934	RBM12B	97	65.620	Choloepus_hoffmanni
ENSSHAG00000015335	RBM12B	100	64.444	ENSCPBG00000003061	RBM12B	100	64.398	Chrysemys_picta_bellii
ENSSHAG00000015335	RBM12B	100	60.251	ENSCANG00000030379	RBM12B	99	67.391	Colobus_angolensis_palliatus
ENSSHAG00000015335	RBM12B	100	57.209	ENSCGRG00001008710	-	97	60.483	Cricetulus_griseus_chok1gshd
ENSSHAG00000015335	RBM12B	84	45.455	ENSCSEG00000004610	rbm12b	81	45.455	Cynoglossus_semilaevis
ENSSHAG00000015335	RBM12B	77	45.455	ENSCVAG00000011047	rbm12b	86	45.455	Cyprinodon_variegatus
ENSSHAG00000015335	RBM12B	67	34.016	ENSCVAG00000009259	-	99	33.197	Cyprinodon_variegatus
ENSSHAG00000015335	RBM12B	67	42.346	ENSDARG00000079717	rbm12b	70	42.346	Danio_rerio
ENSSHAG00000015335	RBM12B	67	31.767	ENSDARG00000055889	zgc:153215	99	31.579	Danio_rerio
ENSSHAG00000015335	RBM12B	100	66.522	ENSDNOG00000041608	RBM12B	94	66.522	Dasypus_novemcinctus
ENSSHAG00000015335	RBM12B	100	63.514	ENSDORG00000024034	-	90	63.514	Dipodomys_ordii
ENSSHAG00000015335	RBM12B	84	61.392	ENSETEG00000013005	-	83	61.331	Echinops_telfairi
ENSSHAG00000015335	RBM12B	52	36.000	ENSEBUG00000010930	-	84	30.339	Eptatretus_burgeri
ENSSHAG00000015335	RBM12B	63	31.838	ENSEBUG00000009015	-	71	31.027	Eptatretus_burgeri
ENSSHAG00000015335	RBM12B	100	59.574	ENSEASG00005016297	RBM12B	95	67.141	Equus_asinus_asinus
ENSSHAG00000015335	RBM12B	100	68.262	ENSECAG00000017870	RBM12B	96	67.421	Equus_caballus
ENSSHAG00000015335	RBM12B	100	60.386	ENSFCAG00000029274	RBM12B	100	59.818	Felis_catus
ENSSHAG00000015335	RBM12B	100	60.132	ENSFALG00000014893	RBM12B	100	60.132	Ficedula_albicollis
ENSSHAG00000015335	RBM12B	100	66.197	ENSFDAG00000005576	RBM12B	88	65.102	Fukomys_damarensis
ENSSHAG00000015335	RBM12B	78	45.455	ENSFHEG00000016425	rbm12b	86	45.455	Fundulus_heteroclitus
ENSSHAG00000015335	RBM12B	77	45.098	ENSGMOG00000013467	rbm12b	87	45.098	Gadus_morhua
ENSSHAG00000015335	RBM12B	100	61.001	ENSGALG00000035129	RBM12B	100	61.265	Gallus_gallus
ENSSHAG00000015335	RBM12B	77	45.455	ENSGAFG00000007224	rbm12b	86	45.455	Gambusia_affinis
ENSSHAG00000015335	RBM12B	66	30.888	ENSGAFG00000007845	zgc:153215	98	30.426	Gambusia_affinis
ENSSHAG00000015335	RBM12B	85	41.992	ENSGACG00000008682	rbm12b	94	41.829	Gasterosteus_aculeatus
ENSSHAG00000015335	RBM12B	100	64.052	ENSGAGG00000009774	RBM12B	100	64.005	Gopherus_agassizii
ENSSHAG00000015335	RBM12B	100	67.615	ENSGGOG00000011909	RBM12B	100	58.837	Gorilla_gorilla
ENSSHAG00000015335	RBM12B	78	44.156	ENSHBUG00000016227	rbm12b	84	44.156	Haplochromis_burtoni
ENSSHAG00000015335	RBM12B	100	66.406	ENSHGLG00000009063	RBM12B	99	65.312	Heterocephalus_glaber_female
ENSSHAG00000015335	RBM12B	100	66.406	ENSHGLG00100021324	RBM12B	99	65.312	Heterocephalus_glaber_male
ENSSHAG00000015335	RBM12B	84	40.152	ENSHCOG00000014952	rbm12b	100	40.152	Hippocampus_comes
ENSSHAG00000015335	RBM12B	67	31.934	ENSIPUG00000019731	zgc:153215	99	31.181	Ictalurus_punctatus
ENSSHAG00000015335	RBM12B	80	46.835	ENSIPUG00000001167	RBM12B	86	46.835	Ictalurus_punctatus
ENSSHAG00000015335	RBM12B	100	62.837	ENSSTOG00000027445	RBM12B	100	68.037	Ictidomys_tridecemlineatus
ENSSHAG00000015335	RBM12B	100	63.622	ENSJJAG00000004165	-	96	62.835	Jaculus_jaculus
ENSSHAG00000015335	RBM12B	83	46.053	ENSKMAG00000013715	rbm12b	91	46.053	Kryptolebias_marmoratus
ENSSHAG00000015335	RBM12B	83	46.053	ENSKMAG00000013704	rbm12b	88	46.053	Kryptolebias_marmoratus
ENSSHAG00000015335	RBM12B	67	31.286	ENSLBEG00000002597	zgc:153215	99	30.710	Labrus_bergylta
ENSSHAG00000015335	RBM12B	91	54.482	ENSLACG00000007177	RBM12B	100	54.482	Latimeria_chalumnae
ENSSHAG00000015335	RBM12B	78	50.649	ENSLOCG00000018344	rbm12b	86	50.649	Lepisosteus_oculatus
ENSSHAG00000015335	RBM12B	100	59.393	ENSLAFG00000029949	RBM12B	98	68.493	Loxodonta_africana
ENSSHAG00000015335	RBM12B	100	60.568	ENSMFAG00000045430	RBM12B	99	67.826	Macaca_fascicularis
ENSSHAG00000015335	RBM12B	100	67.826	ENSMMUG00000005558	RBM12B	96	67.826	Macaca_mulatta
ENSSHAG00000015335	RBM12B	100	60.568	ENSMNEG00000041292	RBM12B	99	67.826	Macaca_nemestrina
ENSSHAG00000015335	RBM12B	100	67.615	ENSMLEG00000037288	RBM12B	94	69.266	Mandrillus_leucophaeus
ENSSHAG00000015335	RBM12B	82	46.733	ENSMAMG00000011998	rbm12b	91	46.535	Mastacembelus_armatus
ENSSHAG00000015335	RBM12B	78	44.156	ENSMZEG00005015005	rbm12b	86	44.156	Maylandia_zebra
ENSSHAG00000015335	RBM12B	78	44.156	ENSMZEG00005014845	rbm12b	85	43.243	Maylandia_zebra
ENSSHAG00000015335	RBM12B	67	66.406	ENSMGAG00000011985	RBM12B	99	66.406	Meleagris_gallopavo
ENSSHAG00000015335	RBM12B	100	57.845	ENSMAUG00000021752	-	100	57.679	Mesocricetus_auratus
ENSSHAG00000015335	RBM12B	100	62.428	ENSMICG00000036969	RBM12B	100	65.888	Microcebus_murinus
ENSSHAG00000015335	RBM12B	100	57.244	ENSMOCG00000005603	-	100	56.250	Microtus_ochrogaster
ENSSHAG00000015335	RBM12B	69	65.625	ENSMMOG00000002404	rbm12b	82	65.625	Mola_mola
ENSSHAG00000015335	RBM12B	100	98.523	ENSMODG00000007436	RBM12B	98	98.523	Monodelphis_domestica
ENSSHAG00000015335	RBM12B	67	30.632	ENSMALG00000001222	zgc:153215	98	30.906	Monopterus_albus
ENSSHAG00000015335	RBM12B	82	48.718	ENSMALG00000012059	rbm12b	90	48.718	Monopterus_albus
ENSSHAG00000015335	RBM12B	100	60.308	ENSMUSG00000052137	Rbm12b2	97	59.846	Mus_musculus
ENSSHAG00000015335	RBM12B	100	55.879	ENSMUSG00000046667	Rbm12b1	96	60.703	Mus_musculus
ENSSHAG00000015335	RBM12B	100	61.182	MGP_SPRETEiJ_G0026765	-	86	60.703	Mus_spretus
ENSSHAG00000015335	RBM12B	100	55.763	MGP_SPRETEiJ_G0026766	-	94	60.703	Mus_spretus
ENSSHAG00000015335	RBM12B	100	66.204	ENSMPUG00000018637	RBM12B	96	65.432	Mustela_putorius_furo
ENSSHAG00000015335	RBM12B	100	62.822	ENSMLUG00000002359	RBM12B	100	62.121	Myotis_lucifugus
ENSSHAG00000015335	RBM12B	100	65.008	ENSNGAG00000002801	-	100	64.230	Nannospalax_galili
ENSSHAG00000015335	RBM12B	78	44.156	ENSNBRG00000015057	rbm12b	86	44.156	Neolamprologus_brichardi
ENSSHAG00000015335	RBM12B	100	59.801	ENSNLEG00000032050	RBM12B	95	67.391	Nomascus_leucogenys
ENSSHAG00000015335	RBM12B	100	65.728	ENSODEG00000019204	RBM12B	90	64.789	Octodon_degus
ENSSHAG00000015335	RBM12B	78	44.156	ENSONIG00000020612	rbm12b	86	44.156	Oreochromis_niloticus
ENSSHAG00000015335	RBM12B	67	30.203	ENSONIG00000006054	zgc:153215	100	30.203	Oreochromis_niloticus
ENSSHAG00000015335	RBM12B	100	70.147	ENSOANG00000015735	-	97	70.281	Ornithorhynchus_anatinus
ENSSHAG00000015335	RBM12B	100	59.505	ENSOCUG00000010353	RBM12B	100	58.718	Oryctolagus_cuniculus
ENSSHAG00000015335	RBM12B	85	41.142	ENSORLG00000008228	rbm12b	97	36.243	Oryzias_latipes
ENSSHAG00000015335	RBM12B	85	40.945	ENSORLG00020013619	rbm12b	93	40.945	Oryzias_latipes_hni
ENSSHAG00000015335	RBM12B	85	40.945	ENSORLG00015019999	rbm12b	97	36.111	Oryzias_latipes_hsok
ENSSHAG00000015335	RBM12B	100	36.711	ENSOMEG00000022523	rbm12b	97	36.711	Oryzias_melastigma
ENSSHAG00000015335	RBM12B	100	65.831	ENSOGAG00000002979	RBM12B	85	65.652	Otolemur_garnettii
ENSSHAG00000015335	RBM12B	100	66.306	ENSPTIG00000020071	RBM12B	100	59.955	Panthera_tigris_altaica
ENSSHAG00000015335	RBM12B	100	59.444	ENSPTRG00000020420	RBM12B	92	67.299	Pan_troglodytes
ENSSHAG00000015335	RBM12B	100	67.773	ENSPANG00000035535	RBM12B	94	69.266	Papio_anubis
ENSSHAG00000015335	RBM12B	79	48.052	ENSPKIG00000018719	rbm12b	86	48.052	Paramormyrops_kingsleyae
ENSSHAG00000015335	RBM12B	66	33.984	ENSPKIG00000014851	zgc:153215	98	33.984	Paramormyrops_kingsleyae
ENSSHAG00000015335	RBM12B	100	63.804	ENSPSIG00000001348	RBM12B	100	63.804	Pelodiscus_sinensis
ENSSHAG00000015335	RBM12B	100	57.193	ENSPEMG00000008279	-	100	61.385	Peromyscus_maniculatus_bairdii
ENSSHAG00000015335	RBM12B	100	98.255	ENSPCIG00000008556	RBM12B	100	98.255	Phascolarctos_cinereus
ENSSHAG00000015335	RBM12B	56	52.381	ENSPFOG00000017451	zgc:153215	66	52.381	Poecilia_formosa
ENSSHAG00000015335	RBM12B	77	45.455	ENSPFOG00000020937	rbm12b	83	45.455	Poecilia_formosa
ENSSHAG00000015335	RBM12B	67	30.134	ENSPLAG00000000232	zgc:153215	92	54.545	Poecilia_latipinna
ENSSHAG00000015335	RBM12B	77	45.455	ENSPLAG00000018782	rbm12b	86	45.455	Poecilia_latipinna
ENSSHAG00000015335	RBM12B	67	30.326	ENSPMEG00000016662	zgc:153215	93	54.430	Poecilia_mexicana
ENSSHAG00000015335	RBM12B	77	45.455	ENSPMEG00000011418	rbm12b	86	45.455	Poecilia_mexicana
ENSSHAG00000015335	RBM12B	67	31.203	ENSPREG00000018608	zgc:153215	99	30.975	Poecilia_reticulata
ENSSHAG00000015335	RBM12B	77	45.455	ENSPREG00000020770	rbm12b	86	45.455	Poecilia_reticulata
ENSSHAG00000015335	RBM12B	100	67.457	ENSPPYG00000018745	RBM12B	93	67.826	Pongo_abelii
ENSSHAG00000015335	RBM12B	100	65.546	ENSPCOG00000023546	RBM12B	100	65.546	Propithecus_coquereli
ENSSHAG00000015335	RBM12B	100	66.562	ENSPVAG00000011803	RBM12B	90	65.615	Pteropus_vampyrus
ENSSHAG00000015335	RBM12B	78	44.156	ENSPNYG00000016696	rbm12b	86	44.156	Pundamilia_nyererei
ENSSHAG00000015335	RBM12B	67	33.094	ENSPNAG00000025628	zgc:153215	99	32.914	Pygocentrus_nattereri
ENSSHAG00000015335	RBM12B	100	37.333	ENSPNAG00000008126	rbm12b	97	37.333	Pygocentrus_nattereri
ENSSHAG00000015335	RBM12B	84	59.969	ENSRNOG00000055292	LOC679087	98	59.509	Rattus_norvegicus
ENSSHAG00000015335	RBM12B	100	55.427	ENSRNOG00000016330	Rbm12b	98	59.509	Rattus_norvegicus
ENSSHAG00000015335	RBM12B	100	67.460	ENSRBIG00000035046	RBM12B	100	58.333	Rhinopithecus_bieti
ENSSHAG00000015335	RBM12B	100	61.888	ENSRROG00000023660	RBM12B	100	67.391	Rhinopithecus_roxellana
ENSSHAG00000015335	RBM12B	100	59.202	ENSSBOG00000027592	RBM12B	100	57.982	Saimiri_boliviensis_boliviensis
ENSSHAG00000015335	RBM12B	78	46.753	ENSSFOG00015001584	rbm12b	86	46.753	Scleropages_formosus
ENSSHAG00000015335	RBM12B	67	37.008	ENSSFOG00015009427	zgc:153215	99	36.811	Scleropages_formosus
ENSSHAG00000015335	RBM12B	82	45.455	ENSSMAG00000019708	rbm12b	91	45.455	Scophthalmus_maximus
ENSSHAG00000015335	RBM12B	67	30.189	ENSSDUG00000012545	zgc:153215	98	30.189	Seriola_dumerili
ENSSHAG00000015335	RBM12B	78	46.243	ENSSDUG00000006856	rbm12b	86	46.050	Seriola_dumerili
ENSSHAG00000015335	RBM12B	78	46.628	ENSSLDG00000016156	rbm12b	86	46.435	Seriola_lalandi_dorsalis
ENSSHAG00000015335	RBM12B	67	52.500	ENSSLDG00000013581	zgc:153215	80	44.118	Seriola_lalandi_dorsalis
ENSSHAG00000015335	RBM12B	85	61.787	ENSSARG00000011845	-	86	60.863	Sorex_araneus
ENSSHAG00000015335	RBM12B	67	64.922	ENSSPUG00000016954	RBM12B	91	64.922	Sphenodon_punctatus
ENSSHAG00000015335	RBM12B	100	37.351	ENSSPAG00000006774	rbm12b	100	37.483	Stegastes_partitus
ENSSHAG00000015335	RBM12B	100	65.217	ENSSSCG00000006110	RBM12B	98	65.217	Sus_scrofa
ENSSHAG00000015335	RBM12B	70	62.786	ENSTGUG00000011860	RBM12B	99	62.595	Taeniopygia_guttata
ENSSHAG00000015335	RBM12B	77	46.753	ENSTRUG00000013738	rbm12b	86	46.753	Takifugu_rubripes
ENSSHAG00000015335	RBM12B	84	66.297	ENSTBEG00000000449	RBM12B	79	65.981	Tupaia_belangeri
ENSSHAG00000015335	RBM12B	100	58.647	ENSUAMG00000023639	RBM12B	98	65.546	Ursus_americanus
ENSSHAG00000015335	RBM12B	100	66.522	ENSUMAG00000016008	RBM12B	93	66.522	Ursus_maritimus
ENSSHAG00000015335	RBM12B	84	68.078	ENSVPAG00000001080	RBM12B	87	66.450	Vicugna_pacos
ENSSHAG00000015335	RBM12B	100	59.798	ENSVVUG00000002694	RBM12B	100	58.903	Vulpes_vulpes
ENSSHAG00000015335	RBM12B	100	42.895	ENSXETG00000014694	rbm12b	100	45.527	Xenopus_tropicalis
ENSSHAG00000015335	RBM12B	69	39.539	ENSXETG00000014696	rbm12b	83	39.080	Xenopus_tropicalis
ENSSHAG00000015335	RBM12B	67	30.857	ENSXCOG00000019654	zgc:153215	98	30.368	Xiphophorus_couchianus
ENSSHAG00000015335	RBM12B	77	45.455	ENSXMAG00000014213	rbm12b	89	42.744	Xiphophorus_maculatus