EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000015478 (Gene tree)
Gene ID: 100920174
Gene Symbol: ZFR
Alias: SPG71|ZFR1
Full Name: zinc finger RNA binding protein
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 48602 bases
Position: chrGL841298.1:1807138-1855739
Accession: 17277
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000018230	DZF	PF07528.14	1.2e-68	1	1
ENSSHAP00000018229	DZF	PF07528.14	1.2e-68	1	1
ENSSHAP00000018229	zf-met	PF12874.7	1.2e-21	1	3
ENSSHAP00000018229	zf-met	PF12874.7	1.2e-21	2	3
ENSSHAP00000018229	zf-met	PF12874.7	1.2e-21	3	3
ENSSHAP00000018230	zf-met	PF12874.7	1.3e-20	1	3
ENSSHAP00000018230	zf-met	PF12874.7	1.3e-20	2	3
ENSSHAP00000018230	zf-met	PF12874.7	1.3e-20	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000018379	ZFR-201	3081	-	ENSSHAP00000018229	1026 (aa)	-	G3WS24
ENSSHAT00000018380	ZFR-202	2712	-	ENSSHAP00000018230	904 (aa)	-	G3WS25

Gene Model

Click here to download ENSSHAG00000015478's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000015478's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000015478	ZFR	94	52.169	ENSSHAG00000004724	ZFR2	99	53.042

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000015478	ZFR	100	94.272	ENSG00000056097	ZFR	98	94.413	Homo_sapiens
ENSSHAG00000015478	ZFR	100	72.351	ENSAPOG00000009740	zfr	96	71.157	Acanthochromis_polyacanthus
ENSSHAG00000015478	ZFR	100	94.563	ENSAMEG00000006184	ZFR	96	94.563	Ailuropoda_melanoleuca
ENSSHAG00000015478	ZFR	94	84.138	ENSACIG00000015926	zfr	96	70.690	Amphilophus_citrinellus
ENSSHAG00000015478	ZFR	100	74.521	ENSAOCG00000013876	zfr	96	75.096	Amphiprion_ocellaris
ENSSHAG00000015478	ZFR	100	77.586	ENSAPEG00000024383	zfr	96	77.874	Amphiprion_percula
ENSSHAG00000015478	ZFR	100	77.255	ENSATEG00000010271	zfr	96	77.735	Anabas_testudineus
ENSSHAG00000015478	ZFR	81	87.890	ENSAPLG00000015627	-	100	87.890	Anas_platyrhynchos
ENSSHAG00000015478	ZFR	100	89.168	ENSACAG00000007880	ZFR	96	88.771	Anolis_carolinensis
ENSSHAG00000015478	ZFR	100	94.272	ENSANAG00000023333	ZFR	96	94.272	Aotus_nancymaae
ENSSHAG00000015478	ZFR	94	84.138	ENSACLG00000016832	zfr	96	70.785	Astatotilapia_calliptera
ENSSHAG00000015478	ZFR	98	81.571	ENSAMXG00000019511	zfr	98	80.229	Astyanax_mexicanus
ENSSHAG00000015478	ZFR	100	94.660	ENSBTAG00000008414	ZFR	98	93.660	Bos_taurus
ENSSHAG00000015478	ZFR	100	94.369	ENSCJAG00000018740	ZFR	98	94.369	Callithrix_jacchus
ENSSHAG00000015478	ZFR	100	92.345	ENSCAFG00000018886	ZFR	96	94.350	Canis_familiaris
ENSSHAG00000015478	ZFR	100	94.563	ENSCAFG00020016859	-	99	94.650	Canis_lupus_dingo
ENSSHAG00000015478	ZFR	100	94.757	ENSCHIG00000007710	ZFR	96	94.757	Capra_hircus
ENSSHAG00000015478	ZFR	99	94.747	ENSTSYG00000010670	ZFR	99	94.747	Carlito_syrichta
ENSSHAG00000015478	ZFR	100	74.002	ENSCAPG00000015655	ZFR	100	69.455	Cavia_aperea
ENSSHAG00000015478	ZFR	99	86.563	ENSCPOG00000000862	ZFR	100	88.218	Cavia_porcellus
ENSSHAG00000015478	ZFR	100	94.175	ENSCCAG00000024473	ZFR	98	94.072	Cebus_capucinus
ENSSHAG00000015478	ZFR	100	94.175	ENSCATG00000038311	ZFR	98	94.078	Cercocebus_atys
ENSSHAG00000015478	ZFR	100	94.466	ENSCLAG00000007408	ZFR	100	94.553	Chinchilla_lanigera
ENSSHAG00000015478	ZFR	100	94.175	ENSCSAG00000017180	ZFR	96	94.175	Chlorocebus_sabaeus
ENSSHAG00000015478	ZFR	93	83.054	ENSCHOG00000003848	ZFR	100	74.976	Choloepus_hoffmanni
ENSSHAG00000015478	ZFR	100	93.224	ENSCPBG00000024211	ZFR	96	93.224	Chrysemys_picta_bellii
ENSSHAG00000015478	ZFR	100	94.175	ENSCANG00000017807	ZFR	98	94.261	Colobus_angolensis_palliatus
ENSSHAG00000015478	ZFR	100	93.981	ENSCGRG00001016009	Zfr	96	93.981	Cricetulus_griseus_chok1gshd
ENSSHAG00000015478	ZFR	100	93.883	ENSCGRG00000001228	Zfr	98	93.883	Cricetulus_griseus_crigri
ENSSHAG00000015478	ZFR	93	75.747	ENSCSEG00000009224	zfr	96	75.029	Cynoglossus_semilaevis
ENSSHAG00000015478	ZFR	99	74.832	ENSCSEG00000011169	ZFR	96	75.408	Cynoglossus_semilaevis
ENSSHAG00000015478	ZFR	99	75.457	ENSCVAG00000016494	zfr	98	73.467	Cyprinodon_variegatus
ENSSHAG00000015478	ZFR	100	78.056	ENSDARG00000027109	zfr	98	79.231	Danio_rerio
ENSSHAG00000015478	ZFR	100	94.283	ENSDNOG00000008852	ZFR	96	94.283	Dasypus_novemcinctus
ENSSHAG00000015478	ZFR	100	92.420	ENSDORG00000016643	Zfr	96	93.780	Dipodomys_ordii
ENSSHAG00000015478	ZFR	100	89.126	ENSETEG00000008937	ZFR	96	89.126	Echinops_telfairi
ENSSHAG00000015478	ZFR	57	59.245	ENSEBUG00000012503	-	94	59.738	Eptatretus_burgeri
ENSSHAG00000015478	ZFR	100	94.563	ENSEASG00005007104	ZFR	96	94.563	Equus_asinus_asinus
ENSSHAG00000015478	ZFR	81	93.780	ENSECAG00000012851	ZFR	95	93.780	Equus_caballus
ENSSHAG00000015478	ZFR	94	81.546	ENSEEUG00000014206	ZFR	90	81.340	Erinaceus_europaeus
ENSSHAG00000015478	ZFR	99	68.582	ENSELUG00000022743	zfr	95	69.054	Esox_lucius
ENSSHAG00000015478	ZFR	100	94.660	ENSFCAG00000000354	ZFR	96	94.660	Felis_catus
ENSSHAG00000015478	ZFR	100	91.642	ENSFALG00000002149	ZFR	96	91.642	Ficedula_albicollis
ENSSHAG00000015478	ZFR	100	93.883	ENSFDAG00000012993	ZFR	97	93.883	Fukomys_damarensis
ENSSHAG00000015478	ZFR	54	77.738	ENSFHEG00000012064	zfr	96	80.263	Fundulus_heteroclitus
ENSSHAG00000015478	ZFR	94	83.333	ENSGMOG00000003967	zfr	90	83.333	Gadus_morhua
ENSSHAG00000015478	ZFR	100	91.837	ENSGALG00000034488	-	96	91.448	Gallus_gallus
ENSSHAG00000015478	ZFR	100	93.878	ENSGALG00000003235	-	96	93.878	Gallus_gallus
ENSSHAG00000015478	ZFR	99	58.102	ENSGAFG00000016229	zfr	96	59.139	Gambusia_affinis
ENSSHAG00000015478	ZFR	99	74.927	ENSGACG00000005045	zfr	98	73.704	Gasterosteus_aculeatus
ENSSHAG00000015478	ZFR	94	92.718	ENSGAGG00000013544	ZFR	98	92.903	Gopherus_agassizii
ENSSHAG00000015478	ZFR	100	94.078	ENSGGOG00000016302	ZFR	98	94.066	Gorilla_gorilla
ENSSHAG00000015478	ZFR	100	94.272	ENSHGLG00000008088	ZFR	96	94.272	Heterocephalus_glaber_female
ENSSHAG00000015478	ZFR	99	94.358	ENSHGLG00100016776	ZFR	99	94.358	Heterocephalus_glaber_male
ENSSHAG00000015478	ZFR	100	75.981	ENSHCOG00000001548	zfr	96	76.313	Hippocampus_comes
ENSSHAG00000015478	ZFR	100	78.352	ENSIPUG00000008192	zfr	96	79.695	Ictalurus_punctatus
ENSSHAG00000015478	ZFR	100	94.563	ENSSTOG00000008742	ZFR	97	94.563	Ictidomys_tridecemlineatus
ENSSHAG00000015478	ZFR	99	90.555	ENSJJAG00000023064	Zfr	97	90.555	Jaculus_jaculus
ENSSHAG00000015478	ZFR	89	78.824	ENSKMAG00000009468	zfr	96	77.125	Kryptolebias_marmoratus
ENSSHAG00000015478	ZFR	100	76.702	ENSLBEG00000010783	zfr	96	76.510	Labrus_bergylta
ENSSHAG00000015478	ZFR	99	78.337	ENSLACG00000000831	ZFR	96	79.443	Latimeria_chalumnae
ENSSHAG00000015478	ZFR	100	79.626	ENSLOCG00000006727	zfr	97	80.467	Lepisosteus_oculatus
ENSSHAG00000015478	ZFR	100	94.175	ENSLAFG00000002308	ZFR	98	92.718	Loxodonta_africana
ENSSHAG00000015478	ZFR	100	94.175	ENSMFAG00000042691	ZFR	97	94.266	Macaca_fascicularis
ENSSHAG00000015478	ZFR	100	94.175	ENSMMUG00000001317	ZFR	96	94.175	Macaca_mulatta
ENSSHAG00000015478	ZFR	100	94.175	ENSMNEG00000029441	ZFR	97	94.175	Macaca_nemestrina
ENSSHAG00000015478	ZFR	99	94.266	ENSMLEG00000028503	ZFR	99	94.266	Mandrillus_leucophaeus
ENSSHAG00000015478	ZFR	100	76.555	ENSMAMG00000017351	zfr	96	76.938	Mastacembelus_armatus
ENSSHAG00000015478	ZFR	94	84.138	ENSMZEG00005021243	zfr	96	70.785	Maylandia_zebra
ENSSHAG00000015478	ZFR	100	79.748	ENSMGAG00000002841	ZFR	99	79.651	Meleagris_gallopavo
ENSSHAG00000015478	ZFR	100	93.301	ENSMAUG00000000976	Zfr	96	93.301	Mesocricetus_auratus
ENSSHAG00000015478	ZFR	100	94.272	ENSMICG00000001244	ZFR	96	94.272	Microcebus_murinus
ENSSHAG00000015478	ZFR	100	93.981	ENSMOCG00000018630	Zfr	96	93.981	Microtus_ochrogaster
ENSSHAG00000015478	ZFR	95	74.378	ENSMMOG00000012585	zfr	90	76.352	Mola_mola
ENSSHAG00000015478	ZFR	100	99.708	ENSMODG00000020412	ZFR	96	99.708	Monodelphis_domestica
ENSSHAG00000015478	ZFR	100	73.043	ENSMALG00000007123	zfr	91	89.655	Monopterus_albus
ENSSHAG00000015478	ZFR	100	93.689	MGP_CAROLIEiJ_G0019681	Zfr	100	94.631	Mus_caroli
ENSSHAG00000015478	ZFR	100	93.883	ENSMUSG00000022201	Zfr	99	94.631	Mus_musculus
ENSSHAG00000015478	ZFR	100	93.883	MGP_PahariEiJ_G0016057	Zfr	100	94.631	Mus_pahari
ENSSHAG00000015478	ZFR	100	93.883	MGP_SPRETEiJ_G0020574	Zfr	100	94.966	Mus_spretus
ENSSHAG00000015478	ZFR	72	93.001	ENSMPUG00000015193	-	94	93.001	Mustela_putorius_furo
ENSSHAG00000015478	ZFR	100	94.466	ENSMLUG00000011797	ZFR	99	94.466	Myotis_lucifugus
ENSSHAG00000015478	ZFR	100	94.369	ENSNGAG00000018328	Zfr	96	94.369	Nannospalax_galili
ENSSHAG00000015478	ZFR	94	84.138	ENSNBRG00000008378	zfr	96	68.356	Neolamprologus_brichardi
ENSSHAG00000015478	ZFR	99	94.169	ENSNLEG00000014098	ZFR	99	94.169	Nomascus_leucogenys
ENSSHAG00000015478	ZFR	99	92.585	ENSMEUG00000010225	ZFR	100	92.585	Notamacropus_eugenii
ENSSHAG00000015478	ZFR	82	97.200	ENSOPRG00000016756	ZFR	80	97.200	Ochotona_princeps
ENSSHAG00000015478	ZFR	99	94.450	ENSODEG00000001990	ZFR	100	94.450	Octodon_degus
ENSSHAG00000015478	ZFR	100	59.829	ENSONIG00000013960	zfr	75	75.179	Oreochromis_niloticus
ENSSHAG00000015478	ZFR	99	95.821	ENSOANG00000014434	ZFR	99	95.821	Ornithorhynchus_anatinus
ENSSHAG00000015478	ZFR	100	94.369	ENSOCUG00000016737	ZFR	96	94.369	Oryctolagus_cuniculus
ENSSHAG00000015478	ZFR	99	76.318	ENSORLG00000017243	zfr	96	75.839	Oryzias_latipes
ENSSHAG00000015478	ZFR	99	76.414	ENSORLG00020014823	zfr	96	75.839	Oryzias_latipes_hni
ENSSHAG00000015478	ZFR	99	76.414	ENSORLG00015005801	zfr	96	75.839	Oryzias_latipes_hsok
ENSSHAG00000015478	ZFR	99	77.321	ENSOMEG00000003336	zfr	96	76.746	Oryzias_melastigma
ENSSHAG00000015478	ZFR	100	92.047	ENSOGAG00000015117	ZFR	96	92.047	Otolemur_garnettii
ENSSHAG00000015478	ZFR	100	92.913	ENSOARG00000012233	ZFR	99	93.883	Ovis_aries
ENSSHAG00000015478	ZFR	99	94.169	ENSPPAG00000027447	ZFR	99	94.163	Pan_paniscus
ENSSHAG00000015478	ZFR	100	94.563	ENSPPRG00000008253	ZFR	96	94.563	Panthera_pardus
ENSSHAG00000015478	ZFR	100	94.466	ENSPTIG00000010038	ZFR	97	94.466	Panthera_tigris_altaica
ENSSHAG00000015478	ZFR	100	94.175	ENSPTRG00000016771	ZFR	98	94.078	Pan_troglodytes
ENSSHAG00000015478	ZFR	99	94.261	ENSPANG00000003729	ZFR	97	94.261	Papio_anubis
ENSSHAG00000015478	ZFR	98	73.451	ENSPKIG00000007596	ZFR	97	70.395	Paramormyrops_kingsleyae
ENSSHAG00000015478	ZFR	100	77.255	ENSPKIG00000016781	ZFR	98	78.811	Paramormyrops_kingsleyae
ENSSHAG00000015478	ZFR	60	89.331	ENSPSIG00000005779	ZFR	100	94.234	Pelodiscus_sinensis
ENSSHAG00000015478	ZFR	94	79.921	ENSPMGG00000015984	zfr	96	70.640	Periophthalmus_magnuspinnatus
ENSSHAG00000015478	ZFR	96	92.230	ENSPEMG00000014573	Zfr	94	92.230	Peromyscus_maniculatus_bairdii
ENSSHAG00000015478	ZFR	100	99.805	ENSPCIG00000020906	ZFR	96	99.805	Phascolarctos_cinereus
ENSSHAG00000015478	ZFR	99	75.312	ENSPFOG00000005931	zfr	96	75.408	Poecilia_formosa
ENSSHAG00000015478	ZFR	99	75.145	ENSPREG00000011947	zfr	96	75.600	Poecilia_reticulata
ENSSHAG00000015478	ZFR	99	93.878	ENSPPYG00000015378	ZFR	99	93.878	Pongo_abelii
ENSSHAG00000015478	ZFR	100	85.631	ENSPCAG00000007277	ZFR	96	85.631	Procavia_capensis
ENSSHAG00000015478	ZFR	95	93.852	ENSPCOG00000000045	ZFR	95	93.852	Propithecus_coquereli
ENSSHAG00000015478	ZFR	93	96.364	ENSPVAG00000004780	ZFR	89	96.364	Pteropus_vampyrus
ENSSHAG00000015478	ZFR	94	84.138	ENSPNYG00000006239	zfr	96	70.526	Pundamilia_nyererei
ENSSHAG00000015478	ZFR	93	87.586	ENSPNAG00000025151	zfr	96	81.400	Pygocentrus_nattereri
ENSSHAG00000015478	ZFR	100	93.786	ENSRNOG00000011627	Zfr	100	98.438	Rattus_norvegicus
ENSSHAG00000015478	ZFR	100	94.078	ENSRBIG00000041561	ZFR	99	94.072	Rhinopithecus_bieti
ENSSHAG00000015478	ZFR	100	94.078	ENSRROG00000044008	ZFR	99	94.072	Rhinopithecus_roxellana
ENSSHAG00000015478	ZFR	99	94.455	ENSSBOG00000024150	ZFR	99	94.455	Saimiri_boliviensis_boliviensis
ENSSHAG00000015478	ZFR	100	72.407	ENSSFOG00015017300	ZFR	96	72.693	Scleropages_formosus
ENSSHAG00000015478	ZFR	99	76.600	ENSSMAG00000000320	zfr	96	76.638	Scophthalmus_maximus
ENSSHAG00000015478	ZFR	100	77.820	ENSSDUG00000013882	zfr	96	78.107	Seriola_dumerili
ENSSHAG00000015478	ZFR	79	76.747	ENSSLDG00000000762	zfr	96	70.402	Seriola_lalandi_dorsalis
ENSSHAG00000015478	ZFR	93	97.297	ENSSARG00000006571	ZFR	93	97.297	Sorex_araneus
ENSSHAG00000015478	ZFR	99	92.315	ENSSPUG00000016786	ZFR	100	92.121	Sphenodon_punctatus
ENSSHAG00000015478	ZFR	100	77.778	ENSSPAG00000019293	zfr	96	77.969	Stegastes_partitus
ENSSHAG00000015478	ZFR	100	94.466	ENSSSCG00000027681	ZFR	96	94.466	Sus_scrofa
ENSSHAG00000015478	ZFR	99	92.621	ENSTGUG00000001909	ZFR	97	93.010	Taeniopygia_guttata
ENSSHAG00000015478	ZFR	100	77.373	ENSTRUG00000016620	zfr	96	77.181	Takifugu_rubripes
ENSSHAG00000015478	ZFR	63	71.821	ENSTNIG00000018856	zfr	98	73.220	Tetraodon_nigroviridis
ENSSHAG00000015478	ZFR	91	85.305	ENSTBEG00000017687	ZFR	96	75.875	Tupaia_belangeri
ENSSHAG00000015478	ZFR	99	92.704	ENSTTRG00000017321	ZFR	96	92.704	Tursiops_truncatus
ENSSHAG00000015478	ZFR	81	93.780	ENSUAMG00000000172	-	99	93.780	Ursus_americanus
ENSSHAG00000015478	ZFR	81	93.780	ENSUMAG00000013805	-	99	93.780	Ursus_maritimus
ENSSHAG00000015478	ZFR	99	94.553	ENSVPAG00000011011	ZFR	96	94.553	Vicugna_pacos
ENSSHAG00000015478	ZFR	100	94.660	ENSVVUG00000022171	-	97	94.660	Vulpes_vulpes
ENSSHAG00000015478	ZFR	100	79.203	ENSXETG00000015598	zfr	96	79.981	Xenopus_tropicalis
ENSSHAG00000015478	ZFR	99	75.072	ENSXCOG00000009361	zfr	96	74.521	Xiphophorus_couchianus
ENSSHAG00000015478	ZFR	99	74.808	ENSXMAG00000013356	zfr	96	74.521	Xiphophorus_maculatus