EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000015528 (Gene tree)
Gene ID: 100925564
Gene Symbol: LSM14B
Alias: C20orf40|FAM61B|FLJ25473|FT005|LSM13|RAP55B|bA11M20.3
Full Name: LSM family member 14B
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 12426 bases
Position: chrGL834662.1:1826732-1839157
Accession: 15887
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000018294	FDF	PF09532.10	3.1e-25	1	1
ENSSHAP00000018295	FDF	PF09532.10	4.2e-25	1	1
ENSSHAP00000018295	LSM14	PF12701.7	6.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000018445	LSM14B-202	1077	-	ENSSHAP00000018295	358 (aa)	-	G3WS90
ENSSHAT00000018444	LSM14B-201	1194	-	ENSSHAP00000018294	305 (aa)	-	G3WS89

Gene Model

Click here to download ENSSHAG00000015528's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000015528's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000015528	LSM14B	86	45.288	ENSSHAG00000007721	LSM14A	84	45.232

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000015528	LSM14B	96	88.986	ENSG00000149657	LSM14B	100	85.484	Homo_sapiens
ENSSHAG00000015528	LSM14B	86	52.351	ENSAPOG00000001780	lsm14b	81	52.584	Acanthochromis_polyacanthus
ENSSHAG00000015528	LSM14B	100	87.869	ENSAMEG00000013430	LSM14B	91	80.000	Ailuropoda_melanoleuca
ENSSHAG00000015528	LSM14B	86	50.000	ENSACIG00000012266	lsm14b	81	48.148	Amphilophus_citrinellus
ENSSHAG00000015528	LSM14B	90	37.634	ENSACIG00000003147	LSM14B	88	42.616	Amphilophus_citrinellus
ENSSHAG00000015528	LSM14B	86	52.778	ENSAOCG00000012380	lsm14b	81	53.191	Amphiprion_ocellaris
ENSSHAG00000015528	LSM14B	97	47.368	ENSAOCG00000006667	LSM14B	83	47.720	Amphiprion_ocellaris
ENSSHAG00000015528	LSM14B	87	47.678	ENSAPEG00000023633	lsm14b	81	47.164	Amphiprion_percula
ENSSHAG00000015528	LSM14B	86	52.548	ENSATEG00000016603	lsm14b	81	52.665	Anabas_testudineus
ENSSHAG00000015528	LSM14B	96	39.692	ENSATEG00000015895	LSM14B	83	43.796	Anabas_testudineus
ENSSHAG00000015528	LSM14B	100	87.662	ENSAPLG00000013203	LSM14B	99	79.949	Anas_platyrhynchos
ENSSHAG00000015528	LSM14B	96	83.046	ENSACAG00000016195	LSM14B	90	83.046	Anolis_carolinensis
ENSSHAG00000015528	LSM14B	100	85.902	ENSANAG00000037915	LSM14B	90	88.116	Aotus_nancymaae
ENSSHAG00000015528	LSM14B	86	48.171	ENSACLG00000019663	lsm14b	81	52.469	Astatotilapia_calliptera
ENSSHAG00000015528	LSM14B	87	57.751	ENSAMXG00000002865	lsm14b	82	57.576	Astyanax_mexicanus
ENSSHAG00000015528	LSM14B	100	84.262	ENSBTAG00000021558	LSM14B	91	77.083	Bos_taurus
ENSSHAG00000015528	LSM14B	100	86.557	ENSCJAG00000014434	LSM14B	90	88.696	Callithrix_jacchus
ENSSHAG00000015528	LSM14B	100	87.213	ENSCAFG00000012518	LSM14B	100	78.462	Canis_familiaris
ENSSHAG00000015528	LSM14B	100	87.213	ENSCAFG00020022150	LSM14B	90	88.696	Canis_lupus_dingo
ENSSHAG00000015528	LSM14B	100	85.574	ENSCHIG00000010284	-	90	86.957	Capra_hircus
ENSSHAG00000015528	LSM14B	96	64.638	ENSCHIG00000022681	-	90	64.638	Capra_hircus
ENSSHAG00000015528	LSM14B	96	88.304	ENSTSYG00000031914	LSM14B	89	88.304	Carlito_syrichta
ENSSHAG00000015528	LSM14B	100	86.557	ENSCAPG00000013059	LSM14B	100	88.338	Cavia_aperea
ENSSHAG00000015528	LSM14B	100	86.885	ENSCPOG00000038080	LSM14B	100	88.596	Cavia_porcellus
ENSSHAG00000015528	LSM14B	96	88.696	ENSCCAG00000021267	LSM14B	90	88.696	Cebus_capucinus
ENSSHAG00000015528	LSM14B	94	75.874	ENSCCAG00000024900	-	99	71.429	Cebus_capucinus
ENSSHAG00000015528	LSM14B	100	86.230	ENSCATG00000036006	LSM14B	90	88.406	Cercocebus_atys
ENSSHAG00000015528	LSM14B	100	86.230	ENSCLAG00000003186	LSM14B	100	88.012	Chinchilla_lanigera
ENSSHAG00000015528	LSM14B	100	87.213	ENSCSAG00000015729	LSM14B	91	80.208	Chlorocebus_sabaeus
ENSSHAG00000015528	LSM14B	50	77.922	ENSCHOG00000006997	-	100	61.056	Choloepus_hoffmanni
ENSSHAG00000015528	LSM14B	100	85.016	ENSCPBG00000027065	LSM14B	91	78.497	Chrysemys_picta_bellii
ENSSHAG00000015528	LSM14B	96	88.889	ENSCANG00000036986	LSM14B	100	88.889	Colobus_angolensis_palliatus
ENSSHAG00000015528	LSM14B	100	87.213	ENSCGRG00001018399	Lsm14b	100	87.213	Cricetulus_griseus_chok1gshd
ENSSHAG00000015528	LSM14B	98	86.913	ENSCGRG00000006111	-	100	86.913	Cricetulus_griseus_crigri
ENSSHAG00000015528	LSM14B	80	76.955	ENSCGRG00000002484	-	100	74.897	Cricetulus_griseus_crigri
ENSSHAG00000015528	LSM14B	96	45.257	ENSCSEG00000020669	LSM14B	83	44.868	Cynoglossus_semilaevis
ENSSHAG00000015528	LSM14B	86	48.137	ENSCSEG00000004722	lsm14b	82	48.773	Cynoglossus_semilaevis
ENSSHAG00000015528	LSM14B	95	33.559	ENSCVAG00000012433	-	88	37.238	Cyprinodon_variegatus
ENSSHAG00000015528	LSM14B	96	52.368	ENSDARG00000025386	lsm14b	90	51.831	Danio_rerio
ENSSHAG00000015528	LSM14B	100	85.902	ENSDNOG00000025246	LSM14B	100	85.902	Dasypus_novemcinctus
ENSSHAG00000015528	LSM14B	100	84.918	ENSDORG00000016683	Lsm14b	100	84.918	Dipodomys_ordii
ENSSHAG00000015528	LSM14B	97	71.264	ENSETEG00000001869	-	90	69.253	Echinops_telfairi
ENSSHAG00000015528	LSM14B	81	67.339	ENSETEG00000011188	-	96	80.995	Echinops_telfairi
ENSSHAG00000015528	LSM14B	100	86.230	ENSEASG00005023218	LSM14B	100	86.230	Equus_asinus_asinus
ENSSHAG00000015528	LSM14B	100	86.557	ENSECAG00000010659	LSM14B	90	88.116	Equus_caballus
ENSSHAG00000015528	LSM14B	80	71.579	ENSEEUG00000007331	LSM14B	100	71.579	Erinaceus_europaeus
ENSSHAG00000015528	LSM14B	92	59.050	ENSELUG00000005780	lsm14b	82	58.934	Esox_lucius
ENSSHAG00000015528	LSM14B	88	50.464	ENSELUG00000016299	LSM14B	90	51.389	Esox_lucius
ENSSHAG00000015528	LSM14B	96	89.565	ENSFCAG00000003248	LSM14B	90	89.565	Felis_catus
ENSSHAG00000015528	LSM14B	100	87.338	ENSFALG00000010618	LSM14B	100	80.362	Ficedula_albicollis
ENSSHAG00000015528	LSM14B	100	85.574	ENSFDAG00000002214	LSM14B	100	87.427	Fukomys_damarensis
ENSSHAG00000015528	LSM14B	70	38.408	ENSFHEG00000003362	LSM14B	73	41.275	Fundulus_heteroclitus
ENSSHAG00000015528	LSM14B	87	48.160	ENSFHEG00000006237	lsm14b	81	48.773	Fundulus_heteroclitus
ENSSHAG00000015528	LSM14B	97	47.714	ENSGMOG00000017115	lsm14b	80	47.170	Gadus_morhua
ENSSHAG00000015528	LSM14B	100	84.244	ENSGALG00000005125	LSM14B	90	88.319	Gallus_gallus
ENSSHAG00000015528	LSM14B	96	45.251	ENSGAFG00000020318	lsm14b	81	44.172	Gambusia_affinis
ENSSHAG00000015528	LSM14B	97	37.966	ENSGAFG00000013723	LSM14B	87	42.735	Gambusia_affinis
ENSSHAG00000015528	LSM14B	89	50.149	ENSGACG00000009973	lsm14b	82	50.453	Gasterosteus_aculeatus
ENSSHAG00000015528	LSM14B	93	73.239	ENSGAGG00000004106	LSM14B	99	80.695	Gopherus_agassizii
ENSSHAG00000015528	LSM14B	100	86.885	ENSGGOG00000005630	LSM14B	100	86.885	Gorilla_gorilla
ENSSHAG00000015528	LSM14B	100	85.902	ENSHGLG00000015055	LSM14B	100	85.902	Heterocephalus_glaber_female
ENSSHAG00000015528	LSM14B	99	85.762	ENSHGLG00100015273	LSM14B	100	85.762	Heterocephalus_glaber_male
ENSSHAG00000015528	LSM14B	88	37.918	ENSHCOG00000004867	lsm14b	86	43.404	Hippocampus_comes
ENSSHAG00000015528	LSM14B	93	50.145	ENSHCOG00000018747	LSM14B	83	49.541	Hippocampus_comes
ENSSHAG00000015528	LSM14B	87	58.360	ENSIPUG00000014946	lsm14b	77	59.119	Ictalurus_punctatus
ENSSHAG00000015528	LSM14B	100	87.869	ENSSTOG00000020482	LSM14B	100	89.474	Ictidomys_tridecemlineatus
ENSSHAG00000015528	LSM14B	100	85.902	ENSJJAG00000012728	Lsm14b	100	85.902	Jaculus_jaculus
ENSSHAG00000015528	LSM14B	65	44.762	ENSKMAG00000012834	-	88	44.976	Kryptolebias_marmoratus
ENSSHAG00000015528	LSM14B	87	50.464	ENSKMAG00000017524	lsm14b	83	50.760	Kryptolebias_marmoratus
ENSSHAG00000015528	LSM14B	58	77.778	ENSLBEG00000007951	LSM14B	66	77.778	Labrus_bergylta
ENSSHAG00000015528	LSM14B	96	87.255	ENSLACG00000003849	LSM14B	79	85.294	Latimeria_chalumnae
ENSSHAG00000015528	LSM14B	96	62.429	ENSLOCG00000003746	lsm14b	96	62.147	Lepisosteus_oculatus
ENSSHAG00000015528	LSM14B	96	88.921	ENSLAFG00000007492	LSM14B	99	88.921	Loxodonta_africana
ENSSHAG00000015528	LSM14B	100	86.885	ENSMFAG00000041479	LSM14B	90	88.986	Macaca_fascicularis
ENSSHAG00000015528	LSM14B	96	88.986	ENSMMUG00000014084	LSM14B	90	88.986	Macaca_mulatta
ENSSHAG00000015528	LSM14B	96	88.986	ENSMNEG00000045573	LSM14B	90	88.986	Macaca_nemestrina
ENSSHAG00000015528	LSM14B	96	88.596	ENSMLEG00000040895	LSM14B	100	88.596	Mandrillus_leucophaeus
ENSSHAG00000015528	LSM14B	88	49.231	ENSMAMG00000020539	lsm14b	83	50.909	Mastacembelus_armatus
ENSSHAG00000015528	LSM14B	94	50.000	ENSMAMG00000024124	LSM14B	82	49.533	Mastacembelus_armatus
ENSSHAG00000015528	LSM14B	89	46.334	ENSMZEG00005026001	LSM14B	85	48.348	Maylandia_zebra
ENSSHAG00000015528	LSM14B	86	48.903	ENSMZEG00005000987	lsm14b	81	51.852	Maylandia_zebra
ENSSHAG00000015528	LSM14B	97	84.703	ENSMGAG00000005300	LSM14B	99	85.836	Meleagris_gallopavo
ENSSHAG00000015528	LSM14B	100	86.557	ENSMAUG00000020700	Lsm14b	100	86.557	Mesocricetus_auratus
ENSSHAG00000015528	LSM14B	100	86.557	ENSMICG00000014675	LSM14B	90	88.986	Microcebus_murinus
ENSSHAG00000015528	LSM14B	100	86.557	ENSMOCG00000020600	Lsm14b	100	86.557	Microtus_ochrogaster
ENSSHAG00000015528	LSM14B	90	73.455	ENSMOCG00000005119	-	93	73.260	Microtus_ochrogaster
ENSSHAG00000015528	LSM14B	86	49.211	ENSMMOG00000020042	lsm14b	84	49.689	Mola_mola
ENSSHAG00000015528	LSM14B	89	47.561	ENSMMOG00000017321	LSM14B	82	47.561	Mola_mola
ENSSHAG00000015528	LSM14B	100	97.049	ENSMODG00000016690	LSM14B	100	97.049	Monodelphis_domestica
ENSSHAG00000015528	LSM14B	91	50.301	ENSMALG00000004783	lsm14b	81	49.843	Monopterus_albus
ENSSHAG00000015528	LSM14B	89	49.249	ENSMALG00000022251	LSM14B	82	49.080	Monopterus_albus
ENSSHAG00000015528	LSM14B	100	85.574	MGP_CAROLIEiJ_G0024770	Lsm14b	90	87.536	Mus_caroli
ENSSHAG00000015528	LSM14B	100	85.902	ENSMUSG00000039108	Lsm14b	100	85.902	Mus_musculus
ENSSHAG00000015528	LSM14B	100	85.574	MGP_PahariEiJ_G0026214	Lsm14b	90	87.536	Mus_pahari
ENSSHAG00000015528	LSM14B	100	85.902	MGP_SPRETEiJ_G0025693	Lsm14b	90	87.826	Mus_spretus
ENSSHAG00000015528	LSM14B	100	86.885	ENSMPUG00000007584	LSM14B	95	79.058	Mustela_putorius_furo
ENSSHAG00000015528	LSM14B	96	86.994	ENSMLUG00000000304	LSM14B	90	86.705	Myotis_lucifugus
ENSSHAG00000015528	LSM14B	75	81.818	ENSNGAG00000016550	Lsm14b	100	81.818	Nannospalax_galili
ENSSHAG00000015528	LSM14B	96	89.474	ENSNLEG00000015757	LSM14B	100	89.474	Nomascus_leucogenys
ENSSHAG00000015528	LSM14B	75	100.000	ENSMEUG00000008267	-	69	100.000	Notamacropus_eugenii
ENSSHAG00000015528	LSM14B	60	52.093	ENSMEUG00000006305	-	82	58.454	Notamacropus_eugenii
ENSSHAG00000015528	LSM14B	54	95.000	ENSOPRG00000000447	-	59	95.000	Ochotona_princeps
ENSSHAG00000015528	LSM14B	100	87.213	ENSODEG00000004099	LSM14B	100	87.213	Octodon_degus
ENSSHAG00000015528	LSM14B	86	52.978	ENSONIG00000020318	lsm14b	82	53.134	Oreochromis_niloticus
ENSSHAG00000015528	LSM14B	68	81.405	ENSOANG00000003370	LSM14B	88	82.156	Ornithorhynchus_anatinus
ENSSHAG00000015528	LSM14B	96	86.589	ENSOCUG00000006279	LSM14B	99	86.589	Oryctolagus_cuniculus
ENSSHAG00000015528	LSM14B	90	43.917	ENSORLG00000028353	LSM14B	82	42.683	Oryzias_latipes
ENSSHAG00000015528	LSM14B	87	48.903	ENSORLG00000013525	lsm14b	81	49.688	Oryzias_latipes
ENSSHAG00000015528	LSM14B	87	48.903	ENSORLG00020020553	lsm14b	81	49.688	Oryzias_latipes_hni
ENSSHAG00000015528	LSM14B	91	35.252	ENSORLG00020018191	-	85	36.078	Oryzias_latipes_hni
ENSSHAG00000015528	LSM14B	87	48.903	ENSORLG00015016862	lsm14b	81	49.688	Oryzias_latipes_hsok
ENSSHAG00000015528	LSM14B	90	43.452	ENSORLG00015013157	LSM14B	82	42.202	Oryzias_latipes_hsok
ENSSHAG00000015528	LSM14B	69	36.822	ENSOMEG00000000171	-	85	37.179	Oryzias_melastigma
ENSSHAG00000015528	LSM14B	86	48.889	ENSOMEG00000023917	lsm14b	81	49.375	Oryzias_melastigma
ENSSHAG00000015528	LSM14B	100	87.869	ENSOGAG00000003915	LSM14B	91	80.469	Otolemur_garnettii
ENSSHAG00000015528	LSM14B	100	85.246	ENSOARG00000014706	LSM14B	98	78.010	Ovis_aries
ENSSHAG00000015528	LSM14B	96	88.696	ENSPPAG00000035799	LSM14B	94	88.696	Pan_paniscus
ENSSHAG00000015528	LSM14B	96	89.275	ENSPPRG00000009197	LSM14B	90	89.275	Panthera_pardus
ENSSHAG00000015528	LSM14B	97	87.162	ENSPTIG00000021518	LSM14B	92	87.179	Panthera_tigris_altaica
ENSSHAG00000015528	LSM14B	96	88.986	ENSPTRG00000013696	LSM14B	90	88.986	Pan_troglodytes
ENSSHAG00000015528	LSM14B	96	88.696	ENSPANG00000011747	LSM14B	90	88.696	Papio_anubis
ENSSHAG00000015528	LSM14B	97	58.857	ENSPKIG00000003275	lsm14b	90	58.382	Paramormyrops_kingsleyae
ENSSHAG00000015528	LSM14B	100	84.365	ENSPSIG00000014762	LSM14B	100	86.167	Pelodiscus_sinensis
ENSSHAG00000015528	LSM14B	100	86.230	ENSPEMG00000017688	Lsm14b	100	86.230	Peromyscus_maniculatus_bairdii
ENSSHAG00000015528	LSM14B	96	97.971	ENSPCIG00000013405	LSM14B	90	97.971	Phascolarctos_cinereus
ENSSHAG00000015528	LSM14B	96	47.899	ENSPFOG00000005631	lsm14b	82	47.692	Poecilia_formosa
ENSSHAG00000015528	LSM14B	87	45.938	ENSPLAG00000005793	LSM14B	82	46.462	Poecilia_latipinna
ENSSHAG00000015528	LSM14B	96	48.169	ENSPLAG00000002449	lsm14b	81	47.988	Poecilia_latipinna
ENSSHAG00000015528	LSM14B	96	47.619	ENSPMEG00000000745	lsm14b	81	47.385	Poecilia_mexicana
ENSSHAG00000015528	LSM14B	87	44.136	ENSPMEG00000022953	LSM14B	82	45.846	Poecilia_mexicana
ENSSHAG00000015528	LSM14B	90	38.406	ENSPREG00000007828	LSM14B	87	40.239	Poecilia_reticulata
ENSSHAG00000015528	LSM14B	100	66.230	ENSPPYG00000011194	LSM14B	90	68.698	Pongo_abelii
ENSSHAG00000015528	LSM14B	96	89.275	ENSPCOG00000013625	LSM14B	90	89.275	Propithecus_coquereli
ENSSHAG00000015528	LSM14B	100	63.518	ENSPVAG00000017918	LSM14B	100	70.288	Pteropus_vampyrus
ENSSHAG00000015528	LSM14B	87	57.453	ENSPNAG00000012777	lsm14b	90	56.000	Pygocentrus_nattereri
ENSSHAG00000015528	LSM14B	100	85.902	ENSRNOG00000054557	Lsm14b	91	78.646	Rattus_norvegicus
ENSSHAG00000015528	LSM14B	100	86.557	ENSRBIG00000033461	LSM14B	99	88.630	Rhinopithecus_bieti
ENSSHAG00000015528	LSM14B	100	86.885	ENSRROG00000042949	LSM14B	100	86.885	Rhinopithecus_roxellana
ENSSHAG00000015528	LSM14B	96	88.304	ENSSBOG00000032820	LSM14B	100	88.304	Saimiri_boliviensis_boliviensis
ENSSHAG00000015528	LSM14B	87	57.632	ENSSFOG00015004627	lsm14b	82	59.752	Scleropages_formosus
ENSSHAG00000015528	LSM14B	86	51.393	ENSSMAG00000012725	lsm14b	82	51.515	Scophthalmus_maximus
ENSSHAG00000015528	LSM14B	94	52.436	ENSSMAG00000000135	LSM14B	83	50.760	Scophthalmus_maximus
ENSSHAG00000015528	LSM14B	89	52.410	ENSSDUG00000022770	LSM14B	83	51.368	Seriola_dumerili
ENSSHAG00000015528	LSM14B	86	52.960	ENSSDUG00000020977	lsm14b	82	53.354	Seriola_dumerili
ENSSHAG00000015528	LSM14B	90	38.869	ENSSLDG00000011354	-	89	45.312	Seriola_lalandi_dorsalis
ENSSHAG00000015528	LSM14B	67	78.261	ENSSARG00000007749	-	100	78.261	Sorex_araneus
ENSSHAG00000015528	LSM14B	100	84.091	ENSSPUG00000014360	LSM14B	91	77.720	Sphenodon_punctatus
ENSSHAG00000015528	LSM14B	95	37.037	ENSSPAG00000018854	-	88	34.483	Stegastes_partitus
ENSSHAG00000015528	LSM14B	86	52.581	ENSSPAG00000020915	lsm14b	80	50.309	Stegastes_partitus
ENSSHAG00000015528	LSM14B	100	83.934	ENSSSCG00000026052	LSM14B	100	83.934	Sus_scrofa
ENSSHAG00000015528	LSM14B	96	89.655	ENSTGUG00000007884	LSM14B	100	89.655	Taeniopygia_guttata
ENSSHAG00000015528	LSM14B	89	47.321	ENSTRUG00000001529	LSM14B	83	46.547	Takifugu_rubripes
ENSSHAG00000015528	LSM14B	96	49.304	ENSTRUG00000011354	lsm14b	81	48.930	Takifugu_rubripes
ENSSHAG00000015528	LSM14B	87	52.308	ENSTNIG00000002445	lsm14b	82	52.134	Tetraodon_nigroviridis
ENSSHAG00000015528	LSM14B	100	67.541	ENSTTRG00000011043	LSM14B	72	63.605	Tursiops_truncatus
ENSSHAG00000015528	LSM14B	100	87.869	ENSUAMG00000025298	LSM14B	90	89.504	Ursus_americanus
ENSSHAG00000015528	LSM14B	100	87.869	ENSUMAG00000000480	LSM14B	90	89.504	Ursus_maritimus
ENSSHAG00000015528	LSM14B	100	87.541	ENSVVUG00000015920	LSM14B	100	87.541	Vulpes_vulpes
ENSSHAG00000015528	LSM14B	80	74.490	ENSXETG00000001997	lsm14b	88	75.945	Xenopus_tropicalis
ENSSHAG00000015528	LSM14B	87	45.732	ENSXMAG00000010013	lsm14b	82	46.246	Xiphophorus_maculatus