EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000015529 (Gene tree)
Gene ID: 100933940
Gene Symbol: RPP38
Alias: -
Full Name: ribonuclease P/MRP subunit p38
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 840 bases
Position: chrGL861687.1:1826901-1827740
Accession: 100933940
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000018296	Ribosomal_L7Ae	PF01248.26	3.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000018446	RPP38-201	840	-	ENSSHAP00000018296	279 (aa)	XP_003771951	G3WS91

Gene Model

Click here to download ENSSHAG00000015529's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03008	Ribosome biogenesis in eukaryotes	KEGG
shr03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000015529's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000015529	RPP38	100	69.123	ENSG00000152464	RPP38	100	68.772	Homo_sapiens
ENSSHAG00000015529	RPP38	88	46.825	ENSAPOG00000001240	rpp38	90	46.693	Acanthochromis_polyacanthus
ENSSHAG00000015529	RPP38	100	70.070	ENSAMEG00000018832	RPP38	100	70.070	Ailuropoda_melanoleuca
ENSSHAG00000015529	RPP38	94	42.857	ENSACIG00000011592	rpp38	98	42.086	Amphilophus_citrinellus
ENSSHAG00000015529	RPP38	94	45.196	ENSAOCG00000017293	rpp38	97	45.105	Amphiprion_ocellaris
ENSSHAG00000015529	RPP38	94	47.744	ENSAPEG00000002315	rpp38	96	47.601	Amphiprion_percula
ENSSHAG00000015529	RPP38	96	42.545	ENSATEG00000000731	rpp38	98	41.577	Anabas_testudineus
ENSSHAG00000015529	RPP38	94	56.274	ENSAPLG00000002054	RPP38	96	56.618	Anas_platyrhynchos
ENSSHAG00000015529	RPP38	94	42.593	ENSACLG00000016958	rpp38	99	40.925	Astatotilapia_calliptera
ENSSHAG00000015529	RPP38	94	42.593	ENSACLG00000016962	rpp38	99	40.925	Astatotilapia_calliptera
ENSSHAG00000015529	RPP38	89	45.418	ENSAMXG00000025023	rpp38	94	45.756	Astyanax_mexicanus
ENSSHAG00000015529	RPP38	100	63.158	ENSBTAG00000007702	RPP38	100	63.509	Bos_taurus
ENSSHAG00000015529	RPP38	100	68.310	ENSCAFG00000024373	RPP38	100	68.310	Canis_familiaris
ENSSHAG00000015529	RPP38	100	68.310	ENSCAFG00020008008	RPP38	100	68.310	Canis_lupus_dingo
ENSSHAG00000015529	RPP38	100	64.211	ENSCHIG00000012484	RPP38	100	64.561	Capra_hircus
ENSSHAG00000015529	RPP38	100	67.018	ENSCPOG00000003981	RPP38	100	66.667	Cavia_porcellus
ENSSHAG00000015529	RPP38	100	67.719	ENSCLAG00000010194	RPP38	100	67.719	Chinchilla_lanigera
ENSSHAG00000015529	RPP38	94	69.288	ENSCSAG00000019055	RPP38	100	69.474	Chlorocebus_sabaeus
ENSSHAG00000015529	RPP38	100	71.930	ENSCHOG00000004335	RPP38	100	70.877	Choloepus_hoffmanni
ENSSHAG00000015529	RPP38	100	64.664	ENSCGRG00001001395	Rpp38	100	64.664	Cricetulus_griseus_chok1gshd
ENSSHAG00000015529	RPP38	100	64.664	ENSCGRG00000017441	Rpp38	100	64.664	Cricetulus_griseus_crigri
ENSSHAG00000015529	RPP38	90	42.912	ENSCSEG00000001721	rpp38	95	43.382	Cynoglossus_semilaevis
ENSSHAG00000015529	RPP38	95	43.636	ENSCVAG00000001676	rpp38	97	42.705	Cyprinodon_variegatus
ENSSHAG00000015529	RPP38	90	48.221	ENSDARG00000040350	rpp38	95	48.148	Danio_rerio
ENSSHAG00000015529	RPP38	100	68.182	ENSDNOG00000040314	RPP38	100	68.182	Dasypus_novemcinctus
ENSSHAG00000015529	RPP38	99	63.043	ENSDORG00000009783	Rpp38	98	62.590	Dipodomys_ordii
ENSSHAG00000015529	RPP38	100	62.766	ENSETEG00000002839	RPP38	100	62.411	Echinops_telfairi
ENSSHAG00000015529	RPP38	99	68.571	ENSEASG00005019783	RPP38	98	68.214	Equus_asinus_asinus
ENSSHAG00000015529	RPP38	99	63.799	ENSEEUG00000014677	RPP38	98	63.799	Erinaceus_europaeus
ENSSHAG00000015529	RPP38	94	42.509	ENSELUG00000010160	rpp38	99	41.414	Esox_lucius
ENSSHAG00000015529	RPP38	100	66.901	ENSFCAG00000022449	RPP38	100	66.901	Felis_catus
ENSSHAG00000015529	RPP38	92	57.308	ENSFALG00000014804	RPP38	94	58.456	Ficedula_albicollis
ENSSHAG00000015529	RPP38	100	69.123	ENSFDAG00000018669	RPP38	100	68.772	Fukomys_damarensis
ENSSHAG00000015529	RPP38	95	39.929	ENSFHEG00000013741	rpp38	99	41.667	Fundulus_heteroclitus
ENSSHAG00000015529	RPP38	93	57.634	ENSGALG00000008794	RPP38	92	58.088	Gallus_gallus
ENSSHAG00000015529	RPP38	58	49.704	ENSGACG00000009258	rpp38	99	49.704	Gasterosteus_aculeatus
ENSSHAG00000015529	RPP38	94	42.593	ENSHBUG00000010937	rpp38	97	40.727	Haplochromis_burtoni
ENSSHAG00000015529	RPP38	100	67.018	ENSHGLG00000012144	RPP38	100	67.018	Heterocephalus_glaber_female
ENSSHAG00000015529	RPP38	89	41.833	ENSIPUG00000022879	rpp38	96	42.751	Ictalurus_punctatus
ENSSHAG00000015529	RPP38	99	67.384	ENSSTOG00000025699	RPP38	96	66.308	Ictidomys_tridecemlineatus
ENSSHAG00000015529	RPP38	100	65.965	ENSJJAG00000007523	Rpp38	100	65.965	Jaculus_jaculus
ENSSHAG00000015529	RPP38	90	39.394	ENSKMAG00000003986	rpp38	93	39.416	Kryptolebias_marmoratus
ENSSHAG00000015529	RPP38	92	45.113	ENSLBEG00000006853	rpp38	93	43.561	Labrus_bergylta
ENSSHAG00000015529	RPP38	95	47.902	ENSLACG00000006502	RPP38	99	48.311	Latimeria_chalumnae
ENSSHAG00000015529	RPP38	99	48.454	ENSLOCG00000018347	rpp38	98	48.797	Lepisosteus_oculatus
ENSSHAG00000015529	RPP38	100	70.671	ENSLAFG00000000509	RPP38	100	70.671	Loxodonta_africana
ENSSHAG00000015529	RPP38	94	68.539	ENSMMUG00000007679	RPP38	100	68.772	Macaca_mulatta
ENSSHAG00000015529	RPP38	90	46.332	ENSMAMG00000012774	rpp38	90	46.565	Mastacembelus_armatus
ENSSHAG00000015529	RPP38	94	42.593	ENSMZEG00005003200	rpp38	99	40.925	Maylandia_zebra
ENSSHAG00000015529	RPP38	94	42.963	ENSMZEG00005003189	rpp38	97	41.091	Maylandia_zebra
ENSSHAG00000015529	RPP38	94	55.725	ENSMGAG00000008217	RPP38	92	56.089	Meleagris_gallopavo
ENSSHAG00000015529	RPP38	100	65.371	ENSMAUG00000003644	Rpp38	100	65.371	Mesocricetus_auratus
ENSSHAG00000015529	RPP38	100	67.719	ENSMOCG00000007020	Rpp38	100	67.368	Microtus_ochrogaster
ENSSHAG00000015529	RPP38	96	41.812	ENSMMOG00000003446	rpp38	97	40.780	Mola_mola
ENSSHAG00000015529	RPP38	100	90.681	ENSMODG00000024091	RPP38	100	90.681	Monodelphis_domestica
ENSSHAG00000015529	RPP38	96	42.553	ENSMALG00000002356	rpp38	97	41.844	Monopterus_albus
ENSSHAG00000015529	RPP38	100	65.724	MGP_CAROLIEiJ_G0023133	Rpp38	100	65.724	Mus_caroli
ENSSHAG00000015529	RPP38	100	65.724	ENSMUSG00000049950	Rpp38	100	65.724	Mus_musculus
ENSSHAG00000015529	RPP38	100	66.316	MGP_PahariEiJ_G0019193	Rpp38	100	65.724	Mus_pahari
ENSSHAG00000015529	RPP38	100	65.018	MGP_SPRETEiJ_G0024051	Rpp38	100	65.018	Mus_spretus
ENSSHAG00000015529	RPP38	99	67.021	ENSMPUG00000018523	RPP38	99	67.021	Mustela_putorius_furo
ENSSHAG00000015529	RPP38	94	68.421	ENSMLUG00000002153	RPP38	100	69.366	Myotis_lucifugus
ENSSHAG00000015529	RPP38	100	65.385	ENSNGAG00000011066	Rpp38	100	65.035	Nannospalax_galili
ENSSHAG00000015529	RPP38	94	42.804	ENSNBRG00000006994	rpp38	98	41.455	Neolamprologus_brichardi
ENSSHAG00000015529	RPP38	94	42.007	ENSONIG00000020467	rpp38	96	41.455	Oreochromis_niloticus
ENSSHAG00000015529	RPP38	94	66.165	ENSOCUG00000022768	-	100	67.254	Oryctolagus_cuniculus
ENSSHAG00000015529	RPP38	94	65.789	ENSOCUG00000024367	-	100	66.901	Oryctolagus_cuniculus
ENSSHAG00000015529	RPP38	91	44.061	ENSORLG00000009219	rpp38	96	42.308	Oryzias_latipes
ENSSHAG00000015529	RPP38	90	43.609	ENSORLG00020011503	rpp38	91	42.908	Oryzias_latipes_hni
ENSSHAG00000015529	RPP38	90	42.188	ENSORLG00015017702	rpp38	91	41.901	Oryzias_latipes_hsok
ENSSHAG00000015529	RPP38	89	43.411	ENSOMEG00000005414	rpp38	94	43.728	Oryzias_melastigma
ENSSHAG00000015529	RPP38	99	70.144	ENSOGAG00000008059	RPP38	98	70.144	Otolemur_garnettii
ENSSHAG00000015529	RPP38	100	64.561	ENSOARG00000004534	RPP38	100	64.912	Ovis_aries
ENSSHAG00000015529	RPP38	99	69.258	ENSPPAG00000041577	RPP38	91	68.772	Pan_paniscus
ENSSHAG00000015529	RPP38	100	67.606	ENSPPRG00000015329	RPP38	100	67.606	Panthera_pardus
ENSSHAG00000015529	RPP38	100	66.901	ENSPTIG00000007188	RPP38	100	66.901	Panthera_tigris_altaica
ENSSHAG00000015529	RPP38	99	69.258	ENSPTRG00000002318	RPP38	91	68.772	Pan_troglodytes
ENSSHAG00000015529	RPP38	94	46.324	ENSPKIG00000025652	rpp38	94	45.290	Paramormyrops_kingsleyae
ENSSHAG00000015529	RPP38	99	61.733	ENSPSIG00000001527	RPP38	98	61.733	Pelodiscus_sinensis
ENSSHAG00000015529	RPP38	100	66.552	ENSPEMG00000008375	Rpp38	100	68.310	Peromyscus_maniculatus_bairdii
ENSSHAG00000015529	RPP38	100	90.681	ENSPCIG00000009096	RPP38	94	90.681	Phascolarctos_cinereus
ENSSHAG00000015529	RPP38	62	47.778	ENSPFOG00000016823	rpp38	82	47.778	Poecilia_formosa
ENSSHAG00000015529	RPP38	95	41.577	ENSPLAG00000007626	rpp38	97	40.210	Poecilia_latipinna
ENSSHAG00000015529	RPP38	90	37.838	ENSPMEG00000020392	rpp38	95	38.628	Poecilia_mexicana
ENSSHAG00000015529	RPP38	90	42.586	ENSPREG00000017744	rpp38	93	42.379	Poecilia_reticulata
ENSSHAG00000015529	RPP38	100	69.474	ENSPPYG00000002113	RPP38	100	69.123	Pongo_abelii
ENSSHAG00000015529	RPP38	94	65.918	ENSPVAG00000007155	RPP38	100	65.965	Pteropus_vampyrus
ENSSHAG00000015529	RPP38	94	42.593	ENSPNYG00000004293	rpp38	97	40.727	Pundamilia_nyererei
ENSSHAG00000015529	RPP38	89	42.339	ENSPNAG00000010633	rpp38	96	43.284	Pygocentrus_nattereri
ENSSHAG00000015529	RPP38	98	64.260	ENSRNOG00000038025	Rpp38	99	64.260	Rattus_norvegicus
ENSSHAG00000015529	RPP38	95	41.971	ENSSMAG00000018276	rpp38	95	41.577	Scophthalmus_maximus
ENSSHAG00000015529	RPP38	90	43.411	ENSSDUG00000001651	rpp38	93	43.233	Seriola_dumerili
ENSSHAG00000015529	RPP38	89	44.488	ENSSLDG00000014355	rpp38	92	45.594	Seriola_lalandi_dorsalis
ENSSHAG00000015529	RPP38	98	49.817	ENSSARG00000012099	RPP38	100	49.645	Sorex_araneus
ENSSHAG00000015529	RPP38	98	56.364	ENSSPUG00000008560	-	98	56.364	Sphenodon_punctatus
ENSSHAG00000015529	RPP38	99	59.928	ENSSPUG00000018363	-	98	59.928	Sphenodon_punctatus
ENSSHAG00000015529	RPP38	99	61.372	ENSSPUG00000005237	-	97	61.372	Sphenodon_punctatus
ENSSHAG00000015529	RPP38	94	42.910	ENSSPAG00000020387	rpp38	96	42.125	Stegastes_partitus
ENSSHAG00000015529	RPP38	100	61.986	ENSSSCG00000027110	RPP38	100	61.806	Sus_scrofa
ENSSHAG00000015529	RPP38	92	56.154	ENSTGUG00000001366	RPP38	97	56.985	Taeniopygia_guttata
ENSSHAG00000015529	RPP38	94	43.820	ENSTNIG00000001334	rpp38	95	43.820	Tetraodon_nigroviridis
ENSSHAG00000015529	RPP38	100	63.860	ENSTTRG00000004420	RPP38	100	62.456	Tursiops_truncatus
ENSSHAG00000015529	RPP38	100	70.070	ENSUAMG00000002618	RPP38	100	70.070	Ursus_americanus
ENSSHAG00000015529	RPP38	100	69.580	ENSUMAG00000012382	RPP38	100	69.580	Ursus_maritimus
ENSSHAG00000015529	RPP38	100	67.958	ENSVVUG00000005272	RPP38	100	67.958	Vulpes_vulpes
ENSSHAG00000015529	RPP38	95	49.818	ENSXETG00000003419	rpp38	99	49.648	Xenopus_tropicalis